| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | 177930 = | 253 (0.980) | 171 (0.800) | 66/260 | 0.0 | 57.5% | coding (370/633 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Aggregation promoting factor |
| ? | TrimmedAssembly_T66_contig_39 | = 663 | 0 (0.000) | intergenic (‑2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Aggregation promoting factor/– | |||||
Only 100 of 171 total aligned reads displayed.
AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/178060‑177930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACCAAT < TrimmedAssembly_T66_contig_39/663‑529 AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACT < 2:288612/136‑1AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGAC > 2:2550144/1‑135AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGAC > 1:353158/1‑135 ACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTC > 1:902120/1‑136 CGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACG > 2:2119153/1‑134 CGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAAC < 1:2382054/133‑1 ACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCATTCAAGTCAAACACAAACTAGCAATCCTGCTGCTCAGACGATGAGTCAAACGGCTA > 1:2312176/1‑136 ACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA > 2:1717689/1‑136 ACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA > 1:48333/1‑136 ACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA > 1:754355/1‑136 CTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA < 1:535252/135‑1 CAACAAACGACCACGACACAGTCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGT > 1:135796/1‑135 CAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAA < 2:539903/136‑1 AACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACA < 1:2010773/136‑1 AACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGACAAGCTAGCCAGACCCAATCAAGTCAAACACTAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACA < 2:2302900/136‑1 ACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAA > 2:1805575/1‑136 CACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAAC < 2:2466322/136‑1 GACACAATCATCAGCTCAGACTAGTCTAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTAT < 2:2334087/136‑1 GACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAATCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGATGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTAT > 2:434804/1‑136 GACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTTAGACGATGACTCAAACGTCTAGTTCAACATCAAACTAT < 1:343483/136‑1 GACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTAT < 2:1354534/136‑1 CACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATA > 1:2326738/1‑135 CACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATA > 2:978651/1‑135 CACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATG < 2:907629/104‑1 cacTCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 2:137400/133‑1 CAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 2:1203858/136‑1 CAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 1:2159976/136‑1 CAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 1:1650609/136‑1 CAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 2:1984175/136‑1 AATCATCAGCTCCGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAA < 1:1526162/136‑1 CATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAAC > 2:78531/1‑134 GCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGT > 2:1736977/1‑135 AGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGA > 1:1828207/1‑136 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCTAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATA < 1:1461484/135‑1 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACCTCAAACTATAGCAACAATGGTTCTGA < 2:339625/133‑1 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAG > 1:309977/1‑136 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATA < 2:2547115/135‑1 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATA < 1:1531101/135‑1 CTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGAT < 1:776956/134‑1 AGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGT > 1:2207682/1‑135 AGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGT > 1:1861480/1‑135 AGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGT > 2:589946/1‑135 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAACCTATAGCAACAATGGTTCTGATAGTGCT < 2:2481339/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 1:589946/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 1:455457/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 2:1849244/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 1:1128872/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 1:1215231/135‑1 CAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 2:1317146/135‑1 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 2:1433954/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:2268455/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 2:1166968/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 2:2147174/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 1:1267465/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCT > 2:856081/1‑136 AACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGAGAGTGCTGCT > 1:805838/1‑136 AAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAG > 2:609538/1‑134 AAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAAATAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATATCAACAATGGTTCTGATAGTGCTGCTAAG > 2:2010352/1‑134 TCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGG > 1:2304291/1‑136 CAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGA < 2:1301462/136‑1 CAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGA < 1:1695890/136‑1 CAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGT < 1:1243601/135‑1 AAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAA > 2:2448833/1‑136 AAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAA > 1:1059079/1‑136 TAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAA > 2:926189/1‑136 TAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGA < 1:359617/135‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 2:1481205/135‑1 CAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAAAATCAAACTATAGCAACAATGGTTCTGATTGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCT < 1:434804/135‑1 GACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGT > 2:1757679/1‑136 CCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGG < 1:334633/133‑1 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGT > 2:1096058/1‑135 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGT > 1:2120578/1‑135 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGT > 2:100803/1‑135 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGT > 1:915669/1‑135 CAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCT < 1:1302822/99‑1 TCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCAT < 2:902120/136‑1 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATAT > 2:1542969/1‑136 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCAT < 2:1900450/134‑1 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCAT > 1:1900450/1‑134 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA > 1:1041620/1‑53 AAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTA < 2:1041620/53‑1 AAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAATCGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCT > 1:1931919/1‑134 AAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA > 1:2270582/1‑69 AAACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCA < 2:2270582/69‑1 ACACAAACTAGCAAACCTTCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:1585009/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:1652886/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:202037/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:2207682/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 1:2065394/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 2:2298504/136‑1 ACACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTC < 1:983066/136‑1 ACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGT > 2:354912/1‑136 ACAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGGGGGTCATATTCTGCTCGT > 2:354892/1‑136 CAAACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTA < 1:1334601/136‑1 AACTAGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGTTTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAAC < 2:754355/136‑1 AGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTC > 1:2445249/1‑136 AGCAAACCTGCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTC > 2:2411015/1‑136 GCTGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCG < 1:8387/136‑1 TGCTCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGT < 1:1736977/136‑1 TCAGACGATGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAG < 2:816942/136‑1 AACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/178060‑177930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACTCAAACGTCTAGTTCAACATCAAACTATAGCAACAATGGTTCTGATAGTGCTGCTAAGGCTTGGATTGCTGGTAAAGAATCTGGTGGTTCATATTCTGCTCGTAACGGTCAATACTTCGGTAAGTACCAAT < TrimmedAssembly_T66_contig_39/663‑529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |