| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_33 | 1 = | 0 (0.000) | 90 (0.720) +GAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGA |
27/156 | 1.1 | 76.1% | intergenic (–/‑193) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_9 | = 79 | 94 (0.420) | intergenic (–/+180) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 186 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACTTGTTGAA > TrimmedAssembly_T66_contig_33/1‑136 | tcgaggataatttcgtagagtatcgggtgcgaccgttgctctgtttttattttctattatatcaaaagaaggtctggaaaaattcgaagatttttccagaccagctttgtttctagagaattatgtcacagcctct < 1:1405271‑M1/1‑1 (MQ=255)tcgaggataatttcgtagagtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctct < 2:2463062‑M1/1‑1 (MQ=255) aggataatttcgtagagtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagaccttctttgtttctagagacttatgtcacagcctctttt < 2:631122‑M1/4‑1 (MQ=255) aggataatttcgtagagtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctctttt < 2:2160622‑M1/4‑1 (MQ=255) aggataatttcgtagagtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctctttt < 1:1113862‑M1/4‑1 (MQ=255) aggataatttcgtagagtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctctttt < 2:2160636‑M1/4‑1 (MQ=255) aggataatttcgtagagtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctctttt < 2:256854‑M1/4‑1 (MQ=255) atttcgtagagtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATaa > 1:2160622‑M1/127‑136 (MQ=255) agtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATAttt < 1:891093‑M1/19‑1 (MQ=255) agtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATAttt < 1:1160431‑M1/19‑1 (MQ=255) agtatcgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATAttt < 1:2541759‑M1/19‑1 (MQ=255) cgggtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATg < 1:232785‑M1/24‑1 (MQ=255) gtgcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCt < 1:1008448‑M1/27‑1 (MQ=255) gcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCtt < 2:131555‑M1/28‑1 (MQ=255) gcgaccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTg > 2:205691‑M1/108‑136 (MQ=255) accgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaa < 1:716945‑M1/32‑1 (MQ=255) ccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaaa < 2:2552640‑M1/33‑1 (MQ=255) ccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaaa < 2:2423284‑M1/33‑1 (MQ=255) ccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaaa < 2:2417644‑M1/33‑1 (MQ=255) ccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaaa < 1:50115‑M1/33‑1 (MQ=255) ccgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaaa > 2:232785‑M1/104‑136 (MQ=255) cgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaaaa < 2:802161‑M1/34‑1 (MQ=255) cgatgctctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCaaaa < 2:1532028‑M1/34‑1 (MQ=255) tctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGa > 1:60580‑M1/97‑136 (MQ=255) tctttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGa > 2:738251‑M1/97‑136 (MQ=255) tctttttctattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGa > 1:1559527‑M1/97‑136 (MQ=255) tcttattttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGa > 2:1084241‑M1/97‑136 (MQ=255) tttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 1:687524‑M1/95‑136 (MQ=255) tttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 1:802161‑M1/95‑136 (MQ=255) tttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 1:910685‑M1/95‑136 (MQ=255) tttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 2:586719‑M1/95‑136 (MQ=255) tttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 1:2373240‑M1/95‑136 (MQ=255) tttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 2:1616196‑M1/95‑136 (MQ=255) tttttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 1:2033481‑M1/95‑136 (MQ=255) ttttttgattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg > 1:2098039‑M1/95‑136 (MQ=255) tttttattttctattatatcaaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGc > 2:704639‑M1/93‑136 (MQ=255) caaaagcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGa < 1:743514‑M1/63‑1 (MQ=255) gcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACg < 1:2734‑M1/68‑1 (MQ=255) gcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACg < 2:2197379‑M1/68‑1 (MQ=255) gcaggtctggaaaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACg < 1:1222111‑M1/68‑1 (MQ=255) aaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATaa > 1:2423284‑M1/58‑135 (MQ=255) aaaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATaa > 1:2423280‑M1/58‑135 (MQ=255) aaattcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAg < 2:102964‑M1/42‑1 (MQ=255) cgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGaa < 1:2092028‑M1/85‑1 (MQ=255) gaagatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGaaa > 1:1955993‑M1/51‑136 (MQ=255) agatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAAtt > 1:557922‑M1/49‑136 (MQ=255) agatttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAAtt > 1:1096518‑M1/49‑136 (MQ=255) agatttttacagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAAtt > 1:1078567‑M1/49‑136 (MQ=255) ttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTTCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAgg > 1:1287110‑M1/45‑136 (MQ=255) ttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAgg > 1:452827‑M1/45‑136 (MQ=255) ttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAgg > 2:907196‑M1/45‑136 (MQ=255) ttttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAgg > 2:521595‑M1/45‑136 (MQ=255) ttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGAt > 2:2734‑M1/43‑136 (MQ=255) ttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGAt > 2:49595‑M1/43‑136 (MQ=255) ttccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGAt > 2:1160431‑M1/43‑136 (MQ=255) ttccagacctgcattgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGAt > 1:1754940‑M1/43‑136 (MQ=255) ccagacctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTg > 2:1345549‑M1/41‑136 (MQ=255) cctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAAc > 2:964829‑M1/36‑135 (MQ=255) ctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTc > 1:2211427‑M1/35‑136 (MQ=255) ctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTc > 1:576457‑M1/35‑136 (MQ=255) ctgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTc > 2:1912230‑M1/35‑136 (MQ=255) ctgcattgtttcgagagacttatgtcacagcctcTTTTTTATAAAAATTATTTAAATGTCTTGCAAAACATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCGATAAAACTGAAATTAAGGATTGTAACTc > 2:751096‑M1/35‑136 (MQ=255) tgctttgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCa < 2:936535‑M1/103‑1 (MQ=255) tgtttctatagacttatgtcacaggatcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATActc > 1:62932‑M1/29‑136 (MQ=255) tgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTc > 2:866495‑M1/29‑130 (MQ=255) tgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTc < 1:866495‑M1/102‑1 (MQ=255) tgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATActc > 1:2463062‑M1/29‑136 (MQ=255) tgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATAc < 1:510137‑M1/106‑1 (MQ=255) tgtttctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATAc < 1:536546‑M1/106‑1 (MQ=255) ctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAAtt < 1:954841‑M1/88‑1 (MQ=255) ctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAATGATTGTAACTCATACTCTTTGa < 1:2517101‑M1/113‑1 (MQ=255) ctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGa < 2:253343‑M1/113‑1 (MQ=255) ctagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGa < 2:1351296‑M1/113‑1 (MQ=255) tagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAg > 2:743514‑M1/23‑136 (MQ=255) tagagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAg > 2:104287‑M1/23‑136 (MQ=255) agagacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAgg > 1:1385367‑M1/22‑136 (MQ=255) gacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACTTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCAt < 2:1238726‑M1/118‑1 (MQ=255) gacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTc < 1:441424‑M1/102‑1 (MQ=255) gacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTc > 2:441424‑M1/19‑120 (MQ=255) gacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCAt < 1:2480554‑M1/118‑1 (MQ=255) gacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCAt < 1:1850585‑M1/118‑1 (MQ=255) gacttatgtcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTCAAATTAAGGATTGTAACTCATACTCTTTGAGGCAt < 1:1282524‑M1/118‑1 (MQ=255) gacttatgtcacagcctcTTTATTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCAt < 2:1180701‑M1/118‑1 (MQ=255) tcacagcctcTTTTTTATAAAAAATATTTAAATGTCtt > 2:605354‑M1/11‑38 (MQ=255) tcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCtttt < 2:2516137‑M1/126‑1 (MQ=255) tcacagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCtttt < 1:2120374‑M1/126‑1 (MQ=255) acagcctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTAc > 1:1017565‑M1/9‑136 (MQ=255) acagcctcTTTTTTATAAAAAATATTGAAATGTCTTTCAAAAAATAGAAGGCGTGATAATATAGTTAAAGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTAc > 2:1536618‑M1/9‑136 (MQ=255) cctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgt < 1:1819294‑M1/132‑1 (MQ=255) cctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgt < 2:1194199‑M1/132‑1 (MQ=255) cctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgt < 1:1507263‑M1/132‑1 (MQ=255) cctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACtt < 2:1583500‑M1/130‑1 (MQ=255) ctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgtt > 2:427833‑M1/4‑136 (MQ=255) ctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgtt < 2:2498593‑M1/133‑1 (MQ=255) ctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgtt > 1:1344223‑M1/4‑136 (MQ=255) ctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgtt < 2:1407354‑M1/133‑1 (MQ=255) ctcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttg > 1:1583500‑M1/4‑134 (MQ=255) tcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgttg < 2:1703639‑M1/134‑1 (MQ=255) tcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACttgttg < 2:1150045‑M1/134‑1 (MQ=255) tcTTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAAAATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGAGTGTTACTCATACTCTTTGAGGCATAACCTTTTACttgttg < 1:1331444‑M1/134‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTTATAAAAAATATTTAAATGTCTTGCAAAAAATAGAAGGCGTGATAATATAGTTAATGAAAACGTTTTCTATAAAACTGAAATTAAGGATTGTAACTCATACTCTTTGAGGCATTACCTTTTACTTGTTGAA > TrimmedAssembly_T66_contig_33/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |