| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_33 | = 1499 | 0 (0.000) | 111 (0.250) +GGTAGCGTCAAGAATCTTGTGTAAATGAAATGCCTTCGTACATATAATATGTATCTAACT |
41/140 | 0.0 | 100% | coding (585/585 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_36 | = 864 | 0 (0.000) | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Transposase/– | |||||
Only 100 of 206 total aligned reads displayed.
AATTTCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_33/1364‑1499 | aaTTTCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTc < 1:869949/136‑1 (MQ=255) atgtctgAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCg < 1:1080202‑M1/133‑2 (MQ=255) tttCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCgg < 2:701448‑M1/136‑3 (MQ=255) ttCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggt < 1:271356‑M1/136‑4 (MQ=255) ttCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggt < 2:1253088‑M1/136‑4 (MQ=255) ttCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggt < 1:1002206‑M1/136‑4 (MQ=255) cTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtag < 1:1173800‑M1/136‑6 (MQ=255) cTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgt < 1:212239‑M1/136‑21 (MQ=255) tattCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaat > 2:1546610‑M1/1‑110 (MQ=255) aaTACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaat < 2:263484‑M1/136‑32 (MQ=255) tACGATGAGGTATGATGAGACTGAAATTTACTTGGTAGCAAAGCTAATTGCAGACGACTTTGATAGTCAACTTGATACTAATAGTAATGATGATTAACATTTAggtagcgtcaagaatcttgtgtaaatgaaatgc < 2:850054‑M1/136‑34 (MQ=255) cGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgcct < 1:1005928‑M1/136‑36 (MQ=255) cGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgcct < 1:2457224‑M1/136‑36 (MQ=255) cGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgcct < 1:336445‑M1/136‑36 (MQ=255) cGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgcct < 2:1957907‑M1/136‑36 (MQ=255) gATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgcct > 1:291652‑M1/1‑100 (MQ=255) tGAGGTATGATGATCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttc < 2:1066354‑M1/135‑38 (MQ=255) tGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttc < 2:944673‑M1/135‑38 (MQ=255) tGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttc < 1:726594‑M1/135‑38 (MQ=255) tGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttc < 1:186768‑M1/135‑38 (MQ=255) tGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttc < 1:1694617‑M1/135‑38 (MQ=255) ggTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtac > 1:1917087‑M1/1‑95 (MQ=255) ggTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtac > 1:2062762‑M1/1‑95 (MQ=255) tATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacat > 1:2486273‑M1/1‑93 (MQ=255) atgatgAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacata > 1:124373‑M1/1‑92 (MQ=255) tgatgaGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatat < 2:203336‑M1/136‑46 (MQ=255) tgatgaGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatat < 2:1999943‑M1/136‑46 (MQ=255) gatgaGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatata > 1:1646937‑M1/1‑90 (MQ=255) gaGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataata > 1:768091‑M1/1‑87 (MQ=255) aGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatat > 2:49765‑M1/1‑86 (MQ=255) cTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgcct < 2:2393353‑M1/118‑36 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 1:1465913‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 1:1416782‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:1920235‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 1:63438‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:1313000‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 1:552275‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:2081509‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:2120956‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:2169677‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:2321106‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:2356032‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:2420111‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:2467834‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:311459‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 2:921822‑M1/1‑81 (MQ=255) gAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgta > 1:1932699‑M1/1‑81 (MQ=255) aCTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaactta < 2:1113889‑M1/136‑63 (MQ=255) ttGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaa > 2:216192‑M1/1‑72 (MQ=255) aGCAAATCGAGTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaa < 2:2199867‑M1/135‑69 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaat < 2:44712‑M1/136‑70 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaat > 1:2381609‑M1/1‑67 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaat < 1:2348322‑M1/136‑70 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaa < 2:594408‑M1/135‑69 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaa < 1:1551364‑M1/135‑69 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaa < 1:1593626‑M1/135‑69 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaa < 1:2356032‑M1/135‑69 (MQ=255) aGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaa < 2:2289810‑M1/135‑69 (MQ=255) aaaGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatg < 1:2467886‑M1/134‑71 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGATCTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 2:55087‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 1:1744917‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 1:2084025‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 2:1097544‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 2:1514246‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 1:1208129‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 1:2021417‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 2:40171‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 1:2420111‑M1/135‑79 (MQ=255) aTTGCAGACTACGTTGATAGACAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttcc < 2:515265‑M1/135‑79 (MQ=255) tACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcct < 2:291015‑M1/136‑89 (MQ=255) tACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcct < 1:1951665‑M1/136‑89 (MQ=255) tACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcct < 2:1756722‑M1/136‑89 (MQ=255) tACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcct < 2:76619‑M1/136‑89 (MQ=255) tACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcct < 2:1211669‑M1/136‑89 (MQ=255) aCGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctg < 1:1626831‑M1/136‑90 (MQ=255) gTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctgga > 1:1030567‑M1/1‑45 (MQ=255) tGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggag > 1:625717‑M1/1‑43 (MQ=255) gTCAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtccttt > 2:1342944‑M1/1‑38 (MQ=255) cAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttga < 1:2482323‑M1/136‑101 (MQ=255) cAACTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttga < 1:946527‑M1/136‑101 (MQ=255) aaCTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttga > 1:1650432‑M1/1‑35 (MQ=255) aaCTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttga > 1:1106462‑M1/1‑35 (MQ=255) aaCTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttga > 2:1668269‑M1/1‑35 (MQ=255) cTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaac > 2:1403034‑M1/1‑33 (MQ=255) cTTGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaac > 2:375372‑M1/1‑33 (MQ=255) tGATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccc > 1:2469137‑M1/1‑31 (MQ=255) gATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctc < 1:2321106‑M1/136‑107 (MQ=255) gATACTAATAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctc > 1:1428446‑M1/1‑30 (MQ=255) aaTAGTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtgga < 1:1313000‑M1/136‑113 (MQ=255) gTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatcc > 1:1148133‑M1/1‑20 (MQ=255) gTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatcc > 2:950990‑M1/1‑20 (MQ=255) gTAATGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcct > 2:1012377‑M1/1‑20 (MQ=255) aaTGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatccgct < 2:2469108‑M1/136‑119 (MQ=255) aaTGATGATGAACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatccgct < 1:2206914‑M1/136‑119 (MQ=255) tgatgatgaACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatccgcttc < 1:612951‑M1/136‑121 (MQ=255) gatgatgaACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatccgcttca > 1:2514183‑M1/1‑15 (MQ=255) atgatgaACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatccgcttcag > 1:498772‑M1/1‑14 (MQ=255) atgatgaACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtac > 2:1718948‑M1/1‑14 (MQ=255) tgaACTTTTCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatccgcttcagagac < 1:464586‑M1/136‑127 (MQ=255) ttCggtagcgtcaagaatcttgtgtaaatgaaatgccttcgtacatataatatgtatctaacttaaataaatgatgcttccaaggtgtcctggagtcctttgaaccctcggtggatccgcttcagagacttctcgt < 1:1403034‑M1/136‑134 (MQ=255) | AATTTCTGAAAATGATAATTCTAAATTATTCAATACGATGAGGTATGATGAGCCTGAAATTTACTTGGTAGCAAAGCGAATTGCAGACTACGTTGATAGTCAACTTGATACTAATAGTAATGATGATGAACTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_33/1364‑1499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |