| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_17 | = 66737 | 3 (0.020) | 960 (1.670) +A |
110/258 | 0.0 | 99.9% | intergenic (+451/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_32 | 1 = | 0 (0.000) | intergenic (–/‑42) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 976 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 | tagttgtgttaagcgattaacgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgaataaa < 1:1073126‑M2/6‑1 (MQ=255)aagttgtgttaagcgattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaaataaa < 2:1148687‑M2/6‑1 (MQ=255)aagttgtgttaagcgattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaaataaa > 1:80149‑M2/131‑136 (MQ=255) gttgtgttaagcgattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAAtt > 1:1659502‑M2/129‑136 (MQ=255) gttgtgttaagcgattaacgcatggaattagatctttgaaaactgaacaaagtctcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAAtt > 2:1208495‑M2/129‑136 (MQ=255) gctgtgttaagcgattaacacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaaataaata > 2:1654600‑M2/129‑135 (MQ=255) gtgttaagcgattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTa < 1:2253063‑M2/11‑1 (MQ=255) gttaagcgattaacgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAg < 2:1567641‑M2/12‑1 (MQ=255) gttaagcgattaacgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAg < 2:1872434‑M2/12‑1 (MQ=255) gttaagcgattaacacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAg < 1:1512773‑M2/12‑1 (MQ=255) ttaagcgattaacgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGt > 1:904876‑M2/123‑135 (MQ=255) taagcgattaacgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTac > 1:2534718‑M2/122‑136 (MQ=255) agcgattaacgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtttagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTaca > 2:1082864‑M2/120‑135 (MQ=255) acgcatggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAAt > 2:2118895‑M2/112‑136 (MQ=255) acgcacggaattatatctatgaaaactgaacaaagtttcgacgaatcaaatgagtagggtctcttgagttttaatcaagagcaaaacatattcgaagtcaaatcgctagcgACTAAATTATAGTACAACATTAAAt > 1:2092307‑M2/112‑136 (MQ=255) acgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAAt < 2:899870‑M2/25‑1 (MQ=255) acgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAAt < 1:414452‑M2/25‑1 (MQ=255) acgcacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAAt > 2:162642‑M2/112‑136 (MQ=255) acacacgtaattagatctttgaaaacttaacaaagtttcgacgaatcaactttgtagggtctcttgattttgaaacaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt < 2:504042‑M2/25‑1 (MQ=255) acacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt < 2:1754376‑M2/25‑1 (MQ=255) acacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt < 1:844202‑M2/25‑1 (MQ=255) acacacggaattagatctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt < 1:1327251‑M2/25‑1 (MQ=255) acgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaaataaa < 2:1543210‑M2/6‑1 (MQ=255) acgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt > 2:1499999‑M2/107‑131 (MQ=255) acgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCt > 1:1243360‑M2/107‑136 (MQ=255) attagatctttgaaaactgaacaaagtttcgacgaatcaaatttgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaatacgcaagcaAAAAAATTTTATTACAACATTAAaagagcagttt > 1:1991088‑M2/103‑131 (MQ=255) tctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGATCTTTTTAGAAc > 2:2560259‑M2/97‑135 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAAt < 2:2058447‑M2/25‑1 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTGTTTAGAACTcatcat > 2:2506458‑M2/91‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAAt > 1:765055‑M2/91‑115 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 1:2036356‑M2/91‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 2:1429173‑M2/91‑136 (MQ=255) aaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 1:453904‑M2/91‑136 (MQ=255) aaaacagaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaatagcaaaacatttgcgaagacaattcgcaagcaAATAAATTTTAGTAAAACATTAAATGAGCATTTTAGAACTcatcat > 1:520015‑M2/91‑136 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAg < 2:2163793‑M2/12‑1 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTcatcat > 2:359653‑M2/90‑135 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAtt > 2:2392959‑M2/90‑136 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAtt > 2:629003‑M2/90‑136 (MQ=255) aaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAtt > 2:1401182‑M2/90‑136 (MQ=255) tgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 2:1926478‑M2/51‑1 (MQ=255) acaaagtttcgacgaataaaatgtgtagggtctcttgattttgaatcaagagcaaaacaattgcgaagtcaattcgctagcaAATAAATTTTATTACAACAATAAATGAGCTTTTAAGAACTCAACATTAGTTTga > 1:2184980‑M2/83‑136 (MQ=255) aaaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAtt < 2:2217052‑M2/51‑1 (MQ=255) aaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTgaga > 2:83635‑M2/81‑136 (MQ=255) aagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGagag < 1:1006891‑M2/57‑1 (MQ=255) ttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTg < 1:1451767‑M2/61‑1 (MQ=255) ttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTg < 1:1690907‑M2/61‑1 (MQ=255) ttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTg < 2:1028484‑M2/61‑1 (MQ=255) atcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTgg < 2:1820652‑M2/68‑1 (MQ=255) caaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTc > 1:1736899‑M2/66‑136 (MQ=255) caaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTATTTTGTGAGTTTGATCCTGGCTc > 2:43896‑M2/66‑136 (MQ=255) aatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAg > 2:671406‑M2/64‑136 (MQ=255) aatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAg > 2:1702128‑M2/64‑136 (MQ=255) ggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAc > 2:2337208‑M2/55‑134 (MQ=255) ctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTg > 2:2284870‑M2/52‑135 (MQ=255) ctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTg < 2:478250‑M2/84‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:861070‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:704672‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:714305‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:1957848‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 2:951883‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:1839692‑M2/86‑1 (MQ=255) tcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggc < 1:2139044‑M2/86‑1 (MQ=255) tgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTCATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggcggc > 1:862167‑M2/48‑136 (MQ=255) tgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggcggc > 1:1539014‑M2/48‑136 (MQ=255) tgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTggcggc > 1:2378612‑M2/48‑136 (MQ=255) gatttttaatcaagagcaaaacagttgcgaagtcaatacgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:1594845‑M2/47‑136 (MQ=255) gattttgaatcaagatcaaaacatttgcgaagtcaattcgcgagcaAATAAATTTTAGTACAACATTAAATGATCTTTTTATAACTCATCATTATTTTGAGAGTTTGATCCTGGCTCAGGACGTACGCTGgctgcg > 1:276323‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 1:1040627‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:1288700‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 1:1194759‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:1009115‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:738105‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:581012‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:535449‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg < 1:1774837‑M2/90‑1 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 2:13481‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 1:2070180‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGgcggcg > 1:2332533‑M2/47‑136 (MQ=255) gattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCATGGCTCAGGACTAACGCTGgcggcg > 2:2467243‑M2/47‑136 (MQ=255) ttttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGt < 2:2011981‑M2/91‑1 (MQ=255) ttgaatcaagagcaaaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGcc < 1:1274253‑M2/94‑1 (MQ=255) tcaagagcaaaacatttgcgaagtcaattcgctagaaAATAAATTTTAGTACAACATTAAATGAGCTTTTTATAACTCATCTTTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAAt > 2:311036‑M2/38‑135 (MQ=255) caagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATAc < 1:477776‑M2/100‑1 (MQ=255) aagagcaaaacatttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACa < 1:596793‑M2/101‑1 (MQ=255) aaacatttgcgaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGt < 1:139251‑M2/108‑1 (MQ=255) catttgcgaagtcaattcgctagcgAATAAAATTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga < 1:1104400‑M2/111‑1 (MQ=255) catttgcgaagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga < 2:80149‑M2/111‑1 (MQ=255) catttgcgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcga < 1:348850‑M2/111‑1 (MQ=255) cgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGTGCTTTTTAGAACTCAACATTAATTTGAGAGTTTGAACATTGCTCAGGACGAACGCTGTCGGCGTGCCTAAAACATGCAAGTcgaacga > 1:2491828‑M2/20‑134 (MQ=255) cgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaacga > 1:958339‑M2/20‑134 (MQ=255) cgaagtcaattcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTGTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTcgaacga > 1:243170‑M2/20‑134 (MQ=255) gaagtcaattcgctagcgAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAAct < 1:546780‑M2/118‑1 (MQ=255) aagtcaattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCgaacgaac > 2:2432593‑M2/18‑134 (MQ=255) aattcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTa > 1:1870517‑M2/13‑136 (MQ=255) attcgctagcaAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTat > 1:1956770‑M2/12‑136 (MQ=255) ttcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTatt < 1:1626430‑M2/126‑1 (MQ=255) ttcgctagcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTatt < 1:1161521‑M2/126‑1 (MQ=255) agcaAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTgg < 1:1597435‑M2/132‑1 (MQ=255) aAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGt < 1:1914554‑M2/133‑1 (MQ=255) aAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGt > 1:646132‑M2/2‑134 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |