| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_20 | = 39141 | 0 (0.000) | 92 (0.770) | 38/156 | 0.3 | 66.7% | intergenic (+93/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | L‑lactate dehydrogenase (EC 1.1.1.27)/– |
| ? | TrimmedAssembly_T66_contig_9 | = 79 | 92 (0.680) | intergenic (–/+180) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 495 total aligned reads displayed.
‑‑‑‑‑GATAATTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTC > TrimmedAssembly_T66_contig_9/1‑214 | tcgaggataatTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcc < 2:1019415‑M2/129‑51 (MQ=255)tcgaggataatTTCGTAGAGTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctct < 2:2463062‑M2/131‑54 (MQ=255) aggatAATTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctt < 1:2370474‑M2/103‑25 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttt > 1:904615‑M2/1‑76 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgttttt > 1:2036801‑M2/1‑129 (MQ=255) ttCGTAGATTATCGGGTGCGACCGTTGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTaa < 2:1509719/136‑1 (MQ=255) ttCGTAGAGTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatg < 1:1705944‑M2/136‑12 (MQ=255) cGTAGAGTATCGGGTGCGACCGTTGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGTTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtc > 2:1439686‑M2/1‑123 (MQ=255) agTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatattt < 1:2541759‑M2/136‑72 (MQ=255) gTATCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagttttttccagacctgctttgtttctagagacttatgtaacagcctcttttttataaaaaatattta < 1:2534623‑M2/136‑73 (MQ=255) aTCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagtt > 1:1667136‑M2/1‑62 (MQ=255) aTCGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaa > 2:2350749‑M2/1‑115 (MQ=255) cGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGc < 2:754441/136‑1 (MQ=255) cGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgt > 2:90610‑M2/1‑60 (MQ=255) cGGGTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctgtttgaaagtgttagttcgt < 2:2097444‑M2/136‑77 (MQ=255) cGGGAGCGACCGATGATTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGc < 1:1043240/136‑1 (MQ=255) gggTGCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattcttt > 2:2510805‑M2/1‑59 (MQ=255) ggTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCaa > 1:573605/1‑136 (MQ=255) gCGACCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttata > 1:392580‑M2/1‑55 (MQ=255) gACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCt < 2:1359416/136‑1 (MQ=255) gACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCt < 1:1880199/136‑1 (MQ=255) aCCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTa > 1:2457737/1‑136 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaa < 2:134854‑M2/136‑85 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataac < 1:1295759‑M2/136‑85 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgttt < 1:308666‑M2/136‑85 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacg < 2:192720‑M2/133‑82 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCCCAGCCTCGtgtttttgatgtctattaaaatggacccta < 1:964121‑M2/135‑31 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggacccta < 1:1442093‑M2/135‑31 (MQ=255) aCCGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggacccta < 2:809003‑M2/135‑31 (MQ=255) ccGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaa < 2:2423284‑M2/136‑86 (MQ=255) ccGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaa < 1:50115‑M2/136‑86 (MQ=255) ccGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaa < 2:2552640‑M2/136‑86 (MQ=255) ccGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgcgttgtttctagagacttatgtcacagcctcttttttatacaaaatatttaaatgtcttgcaaa < 2:521879‑M2/136‑86 (MQ=255) ccGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctaataaaatggaccctacc < 1:2155108‑M2/136‑33 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgc < 1:2242767‑M2/136‑87 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgc < 1:2194515‑M2/136‑87 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttga < 1:540682‑M2/136‑87 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttga < 2:964113‑M2/136‑87 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttga > 1:2275399‑M2/1‑50 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtgtga < 1:1018933‑M2/136‑87 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacggttga < 1:1168128‑M2/136‑87 (MQ=255) cGATGCTCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTATGGAAAAATCCGAAGATTTTTCCAGACCTGGTTTGTTTCTAGAGACTTATGTCACATCCTCTtgtttttgatgtctattaaaatggaccctaccg < 1:1959370‑M2/136‑34 (MQ=255) aTGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGATAGTTg > 1:182226/1‑136 (MQ=255) atgctctttttttattttcTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagt < 1:793553‑M2/130‑89 (MQ=255) tttttttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGa > 2:1974632/2‑134 (MQ=255) cTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGa > 2:329254/1‑134 (MQ=255) cTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGa > 2:45493/1‑134 (MQ=255) cTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGa > 2:1289428/1‑134 (MQ=255) ttttttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGATACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCt > 1:1602498/1‑136 (MQ=255) ttttttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGAcc < 1:1638799/135‑1 (MQ=255) ctctttttttattTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatag < 2:1256368‑M2/133‑92 (MQ=255) ctctttttttattTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaata < 1:2328335‑M2/132‑91 (MQ=255) ctctttttttattTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagt < 2:2367150‑M2/130‑89 (MQ=255) tctttttttatTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaataga > 2:1107249‑M2/3‑44 (MQ=255) tctttttttatTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataac < 1:453709‑M2/134‑93 (MQ=255) tctttttttatTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatg > 1:618037‑M2/3‑44 (MQ=255) tctttttttatTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatg < 2:618037‑M2/84‑43 (MQ=255) tctttttttatTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttg < 2:1319772‑M2/134‑40 (MQ=255) tctttttttatTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttg > 2:785752‑M2/3‑97 (MQ=255) tttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag > 1:687524‑M2/1‑42 (MQ=255) tttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag > 2:1616196‑M2/1‑42 (MQ=255) ttttttgATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag > 1:2098039‑M2/1‑42 (MQ=255) tttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaaggc > 2:704639‑M2/1‑40 (MQ=255) ttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggctt > 2:5747‑M2/1‑39 (MQ=255) ttATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgac > 2:206407‑M2/1‑90 (MQ=255) tATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgat > 1:1899523‑M2/1‑36 (MQ=255) tATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgat > 1:1081646‑M2/1‑36 (MQ=255) tATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCatcaat < 2:182226/136‑1 (MQ=255) tATTGTCGATGATATCAAAAGCAGGTCTGGACAAATtcgaagatttttccagaccggctttgtttctcgagacttatgtcacagcctcgtatgggttaatcgaaaaattcttgatataacgcaataacggcttgat > 2:2138601‑M2/1‑36 (MQ=255) ttttCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcg > 1:840293‑M2/1‑34 (MQ=255) tattatATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatc > 2:1068774‑M2/1‑29 (MQ=255) tattatATCAAAAGCAGGTCTGGAAAAATccgaagatttttccatacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcg < 2:1226357‑M2/129‑101 (MQ=255) tattatATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcg > 1:1226296‑M2/1‑29 (MQ=255) ttatATCAACAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactt > 1:853615‑M2/1‑27 (MQ=255) tataTCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgacttt > 1:1337039‑M2/1‑26 (MQ=255) aacagGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagca > 2:389783‑M2/3‑70 (MQ=255) aGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATg < 1:1357234/136‑1 (MQ=255) gCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaaggcgtgataatatagttaatgaaaacg < 1:2734‑M2/136‑121 (MQ=255) gCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatcattgtcgtgtac < 2:2269789‑M2/135‑120 (MQ=255) gCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgtactt < 1:1191178‑M2/136‑121 (MQ=255) gCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGa > 2:1707096/1‑136 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag > 2:1762021‑M2/2‑69 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag < 2:230853‑M2/135‑68 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag < 1:1408742‑M2/135‑68 (MQ=255) aGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTCAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGa < 2:219997/134‑1 (MQ=255) tCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatcattgtcgtgtacacc > 1:124559‑M2/1‑11 (MQ=255) tCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgtacttggtc > 2:1001495‑M2/1‑11 (MQ=255) tCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcagg > 1:113285‑M2/1‑64 (MQ=255) tCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcagg > 1:316982‑M2/1‑64 (MQ=255) tCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcagg > 1:2002540‑M2/1‑64 (MQ=255) cTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTcc < 2:312217/136‑1 (MQ=255) cTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTc < 1:1007449/135‑1 (MQ=255) tGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatcattgtcgtgtacaccgaaca < 2:2170908‑M2/136‑128 (MQ=255) tGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctgtatataacgcaataacggcttgatcggcatcattgtcgtgtacaccgaaca < 2:201705‑M2/136‑128 (MQ=255) tGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctc < 2:1697872‑M2/135‑74 (MQ=255) tGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCt > 1:730766/1‑136 (MQ=255) aaaaaTccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgtacttggtcttgat > 2:1179619‑M2/1‑6 (MQ=255) aaaaTtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaaggcgtgataatatagttaatgaaaacgttttctataa > 1:2423280‑M2/1‑5 (MQ=255) aaaaTccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgtacttggtcttgatat > 1:634809‑M2/1‑5 (MQ=255) aaaTtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag < 2:102964‑M2/98‑95 (MQ=255) | ‑‑‑‑‑GATAATTTCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTGACTC > TrimmedAssembly_T66_contig_9/1‑214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |