| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_25 | 1 = | 0 (0.000) | 205 (0.640) | 70/260 | 0.1 | 100% | intergenic (–/‑494) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_41 | 1 = | 0 (0.000) | intergenic (–/‑2) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 471 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGGTCG > TrimmedAssembly_T66_contig_41/1‑136 | atcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATg < 2:1412877‑M2/20‑1 (MQ=255) tcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 1:1119367‑M2/22‑1 (MQ=255) tcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 1:617173‑M2/22‑1 (MQ=255) tcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 2:1388400‑M2/22‑1 (MQ=255) cttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTg > 1:1345969‑M2/113‑136 (MQ=255) cttacaatggtagtaactaattccaaccaactatagggagtgataactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTg > 1:2040112‑M2/113‑136 (MQ=255) aatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACg > 1:2095043‑M2/108‑134 (MQ=255) atggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCtt > 2:967496‑M2/106‑114 (MQ=255) atggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCtt < 1:967496‑M2/9‑1 (MQ=255) gtaactaattccaacccactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCg > 2:1883801‑M2/101‑136 (MQ=255) gtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCg > 2:1119648‑M2/100‑135 (MQ=255) aactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGt < 2:436913‑M2/37‑1 (MQ=255) agctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTc > 2:774044‑M2/98‑135 (MQ=255) agctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCg < 1:1595669‑M2/39‑1 (MQ=255) aattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCa > 1:2456156‑M2/95‑136 (MQ=255) aattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCaa > 1:1502205‑M2/94‑136 (MQ=255) aattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCaa > 1:1828274‑M2/94‑136 (MQ=255) aattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCaa > 2:484004‑M2/94‑136 (MQ=255) ccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCt > 2:300268‑M2/90‑136 (MQ=255) ccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCt > 2:1279961‑M2/90‑136 (MQ=255) aactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGAt > 1:1984712‑M2/85‑136 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGAtt > 2:1595595‑M2/84‑136 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGAtt > 2:2442294‑M2/84‑136 (MQ=255) ctattgggagtgattactttgggttcatctactttatctcgttttcaacgtggcgctctagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGattt < 1:1044104‑M2/54‑2 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:272383‑M2/54‑1 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:325434‑M2/54‑1 (MQ=255) gagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTAt < 2:26354‑M2/59‑1 (MQ=255) gattactttgggtacatctactttctcactttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 2:1199900‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 2:1533732‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 1:542551‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 2:19046‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 1:736842‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:380251‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 2:513302‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgatttcaacgaggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 2:560013‑M2/65‑1 (MQ=255) gattactttgggtacatctacttgatcacggtttcaacgtggcgcactagcacacctggtcaatgaggggaAGAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt < 2:2405618‑M2/64‑1 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 1:784505‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 2:2340605‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 2:2184719‑M2/70‑135 (MQ=255) tactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGa > 2:394110‑M2/69‑135 (MQ=255) tactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGa > 1:2161057‑M2/69‑135 (MQ=255) ctttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCg > 1:2266850‑M2/67‑136 (MQ=255) gggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTCCGATTAGCTATGAGTTGGACCGGGtt > 1:1450194‑M2/63‑136 (MQ=255) gtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 2:88250‑M2/61‑125 (MQ=255) gtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:88250‑M2/65‑1 (MQ=255) catctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAAcc < 2:1657401‑M2/79‑1 (MQ=255) atctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCt < 1:838154‑M2/80‑1 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCgg > 2:835741‑M2/54‑124 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTAt > 1:11568‑M2/54‑136 (MQ=255) actttatcacgttttcaacgtggcgcactagcacaactggtcaatgatgggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTGCGATTAGCTATGAGTTGGACCGGGTTAAACCTTATg > 1:1764769‑M2/53‑136 (MQ=255) actttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATg > 1:2484446‑M2/53‑136 (MQ=255) actttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATg < 1:1227798‑M2/84‑1 (MQ=255) actttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATg < 1:667953‑M2/84‑1 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 1:478231‑M2/49‑136 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 1:484169‑M2/49‑136 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt < 2:765208‑M2/64‑1 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGa > 1:864348‑M2/49‑133 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGa < 2:864348‑M2/85‑1 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 1:1382310‑M2/49‑136 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 1:1444735‑M2/49‑136 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 2:1726644‑M2/49‑136 (MQ=255) tcacgttttcaacgtggcgcactagcacaactggtcaatgagtggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAg < 1:1304223‑M2/90‑1 (MQ=255) tcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAg < 1:1976559‑M2/90‑1 (MQ=255) tcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGATACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAg < 2:1251971‑M2/90‑1 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa > 2:912978‑M2/44‑97 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAt > 1:263619‑M2/44‑136 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAt > 1:2535362‑M2/44‑136 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAt > 1:1868358‑M2/44‑136 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAt < 2:2255665‑M2/93‑1 (MQ=255) gttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt > 2:63130‑M2/43‑106 (MQ=255) gttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAtt > 1:2219616‑M2/43‑136 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 2:1016103‑M2/95‑1 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 1:1803912‑M2/95‑1 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 1:911713‑M2/95‑1 (MQ=255) tcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 2:698096‑M2/39‑103 (MQ=255) cgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGAt > 1:707351‑M2/30‑136 (MQ=255) acaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGc < 2:1688200‑M2/116‑1 (MQ=255) acaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGc < 2:2546080‑M2/116‑1 (MQ=255) aactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCaa > 2:1620486‑M2/19‑136 (MQ=255) ctggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCaaaa > 1:1946778‑M2/17‑136 (MQ=255) ctggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCaaaa > 2:1981481‑M2/17‑136 (MQ=255) ctggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCaaaa > 2:1051993‑M2/17‑136 (MQ=255) gtcaatgaggggcATAAATCTTACCAAGTAATGGc < 2:205772‑M2/22‑1 (MQ=255) gtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 1:2301385‑M2/14‑136 (MQ=255) gtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa > 1:1000691‑M2/14‑67 (MQ=255) gtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 2:2080310‑M2/14‑136 (MQ=255) caatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCgg > 1:1662982‑M2/12‑136 (MQ=255) caatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCgg > 1:583380‑M2/12‑136 (MQ=255) atgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGaa > 2:1083928‑M2/10‑136 (MQ=255) ggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTg < 1:1192798‑M2/130‑1 (MQ=255) ggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc > 1:1279862‑M2/6‑136 (MQ=255) ggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc < 2:2159433‑M2/131‑1 (MQ=255) ggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc > 2:18107‑M2/6‑136 (MQ=255) ggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc < 1:2119334‑M2/131‑1 (MQ=255) gcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCgg < 1:1709783‑M2/133‑1 (MQ=255) gcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATGAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCgg < 2:342253‑M2/133‑1 (MQ=255) gaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCgg < 1:983488‑M2/133‑1 (MQ=255) gaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCgg < 1:2428405‑M2/133‑1 (MQ=255) aTAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGgtcg > 2:2118978/1‑136 (MQ=255) aTAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGgtcg > 2:1766877/1‑136 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGGTCG > TrimmedAssembly_T66_contig_41/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |