| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | = 88614 | 152 (0.970) | 270 (1.320) | 69/258 | 0.1 | 78.2% | coding (223/300 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | 2 = | 0 (0.000) | coding (2/474 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | CRISPR‑associated protein Cas1 | |||||
Only 100 of 272 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGATTGT > TrimmedAssembly_T66_contig_3/1‑137 | ggtaagttcattcatggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccggg < 2:142445‑M2/3‑1 (MQ=255)ggtaagttcattcatggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccggg > 2:2179451‑M2/134‑136 (MQ=255) taagttcattcatggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAg > 2:1499651‑M2/132‑136 (MQ=255) tcattcatggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGt > 1:2519015‑M2/127‑136 (MQ=255) attcatggggaatgcctcctgtgatgttttctgtggttactaactatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTtg < 1:939317‑M2/12‑1 (MQ=255) attcatggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTtg < 1:1151288‑M2/12‑1 (MQ=255) catggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTtgtg > 1:349426‑M2/122‑135 (MQ=255) catggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTtgtg > 1:1119094‑M2/122‑135 (MQ=255) tggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCt > 1:2046474‑M2/120‑136 (MQ=255) tggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCt > 2:1455946‑M2/120‑136 (MQ=255) tggggaatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCt > 2:1069134‑M2/120‑136 (MQ=255) aatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCtaataa > 1:620285‑M2/115‑136 (MQ=255) aatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaaatcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCtaataa > 2:528856‑M2/115‑136 (MQ=255) aatgcctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatatctatacaattcagaaatctattatgcatttacacaagatatattacgctctccGGGAGGCAGTAGTGGCtaataa > 2:1130949‑M2/115‑136 (MQ=255) ctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATAtt < 2:249318‑M2/27‑1 (MQ=255) ctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATAtt > 1:2148420‑M2/110‑136 (MQ=255) ctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATAtt < 2:2531403‑M2/27‑1 (MQ=255) ctcctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATAtt < 1:474966‑M2/27‑1 (MQ=255) cctgtgatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATAtttt < 1:1006160‑M2/29‑1 (MQ=255) cctgtgatgttgtctgtggttactaaatatcctaagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATAtttt < 2:2326706‑M2/29‑1 (MQ=255) gtgatgttttctgtggttactaaatatcataagggaaggcattccctattactatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCa > 1:1840297‑M2/105‑136 (MQ=255) gatgttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCAtt > 1:1677540‑M2/103‑136 (MQ=255) gttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGtt < 2:2350402‑M2/37‑1 (MQ=255) gttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGtt < 2:1854755‑M2/37‑1 (MQ=255) ttttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTa > 1:1942368‑M2/99‑136 (MQ=255) tttctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTAt < 1:1883736‑M2/39‑1 (MQ=255) tctgtggttactaaatatcataagtgaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTAttt > 2:1525574‑M2/96‑136 (MQ=255) ctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTg < 2:2136504‑M2/42‑1 (MQ=255) ctgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTg < 2:1929286‑M2/42‑1 (MQ=255) tgtggttactaaatatcataagggaaggcattccctatttctatacacttcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTgg > 2:479240‑M2/94‑136 (MQ=255) tgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTgg > 1:269645‑M2/94‑136 (MQ=255) tgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTgg > 2:758739‑M2/94‑136 (MQ=255) tgtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTgg > 2:116202‑M2/94‑136 (MQ=255) gtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGt < 2:699104‑M2/44‑1 (MQ=255) gtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGt < 1:1301583‑M2/44‑1 (MQ=255) gtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGt < 1:1500162‑M2/44‑1 (MQ=255) gtggttactaaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGt < 1:2256807‑M2/44‑1 (MQ=255) taaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGtt < 1:1439208‑M2/52‑1 (MQ=255) aaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccg < 2:179024‑M2/1‑1 (MQ=255) aaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccg > 1:179024‑M2/84‑84 (MQ=255) aaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCGGt > 1:72623‑M2/84‑134 (MQ=255) aaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGt > 1:1291916‑M2/84‑134 (MQ=255) aaatatcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGt > 1:1318437‑M2/84‑134 (MQ=255) tcataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCg < 2:1942368‑M2/58‑1 (MQ=255) ataagggaaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTc > 1:2431550‑M2/77‑136 (MQ=255) aaggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtt < 1:104085‑M2/66‑1 (MQ=255) aggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtttt < 2:1631861‑M2/68‑1 (MQ=255) aggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtttt < 2:2238788‑M2/68‑1 (MQ=255) aggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtttt < 2:376257‑M2/68‑1 (MQ=255) aggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtttt < 2:101299‑M2/68‑1 (MQ=255) aggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtttt < 1:1061548‑M2/68‑1 (MQ=255) aggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtttt < 1:758739‑M2/68‑1 (MQ=255) aggcattccctatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGAtttt < 1:2448392‑M2/68‑1 (MQ=255) tatttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTa < 2:1677540‑M2/78‑1 (MQ=255) ttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACg < 2:31007‑M2/81‑1 (MQ=255) ttctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACg < 2:2445906‑M2/81‑1 (MQ=255) ctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAAc > 2:2431420‑M2/54‑133 (MQ=255) ctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCt < 1:1626191‑M2/83‑1 (MQ=255) ctatacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCt < 2:2085592‑M2/83‑1 (MQ=255) atacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGc < 2:2389301‑M2/85‑1 (MQ=255) atacaattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGc < 1:206924‑M2/85‑1 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGt < 2:1367851‑M2/44‑1 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCCATTAACGCTGCACTc > 2:1993590‑M2/48‑136 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTc > 1:872940‑M2/48‑136 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTc > 1:1526803‑M2/48‑136 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTc > 2:604559‑M2/48‑136 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTc > 1:2197795‑M2/48‑136 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTc < 2:1115429‑M2/89‑1 (MQ=255) aattcagaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTCAGCCCAATTAACGCTGCACTc < 1:893642‑M2/89‑1 (MQ=255) agaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACt > 2:870480‑M2/43‑135 (MQ=255) agaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACt > 2:1972144‑M2/43‑135 (MQ=255) agaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACt > 2:445825‑M2/43‑135 (MQ=255) agaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACt > 2:551968‑M2/43‑135 (MQ=255) agaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACt > 2:2202696‑M2/43‑135 (MQ=255) agaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACt > 1:1713990‑M2/43‑135 (MQ=255) agaaatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACt > 1:240775‑M2/43‑135 (MQ=255) aatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACgg < 2:2046474‑M2/97‑1 (MQ=255) aatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACg < 1:14632‑M2/96‑1 (MQ=255) aatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACg < 1:1253914‑M2/96‑1 (MQ=255) aatcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACg < 1:1583213‑M2/96‑1 (MQ=255) tcttttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAt < 2:1579041‑M2/99‑1 (MQ=255) tttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATAc > 2:1890465‑M2/35‑135 (MQ=255) tttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACg < 2:1291916‑M2/102‑1 (MQ=255) tttatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACg < 1:1354543‑M2/102‑1 (MQ=255) attatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACg < 2:617696‑M2/102‑1 (MQ=255) tatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGcc < 1:2373593‑M2/104‑1 (MQ=255) tatgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGcc < 2:272070‑M2/104‑1 (MQ=255) tgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGt < 1:2263965‑M2/106‑1 (MQ=255) tgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGt < 2:700987‑M2/106‑1 (MQ=255) tgcatttacacaagatattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGt < 1:1516166‑M2/106‑1 (MQ=255) atattttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATgg > 1:533372‑M2/17‑136 (MQ=255) attttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTa > 2:2372635‑M2/15‑92 (MQ=255) attttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAt > 2:1758120‑M2/15‑113 (MQ=255) attttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTg > 1:145027‑M2/15‑136 (MQ=255) attttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTg > 1:2087427‑M2/15‑136 (MQ=255) attttacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTg > 1:2356796‑M2/15‑136 (MQ=255) tacgctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATc < 1:2179451‑M2/126‑1 (MQ=255) gctctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCgag < 2:453323‑M2/129‑1 (MQ=255) ctccGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCgagaga > 1:427508‑M2/5‑136 (MQ=255) gggAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGATTGt > 1:563902/1‑136 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGATTGT > TrimmedAssembly_T66_contig_3/1‑137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |