BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	TrimmedAssembly_T66_contig_1	= 88613	132 (0.880)	241 (1.300)	69/262	0.0	78.5%	coding (224/300 nt)	rasttk_feature_annotation_tool=elepa@bvbrc	hypothetical protein
*	?	TrimmedAssembly_T66_contig_24	= 19315	0 (0.000)	241 (1.300)	69/262	0.0	78.5%	intergenic (+87/–)	rasttk_feature_annotation_tool=elepa@bvbrc/–	hypothetical protein/–

Only 100 of 241 total aligned reads displayed.

GTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  TrimmedAssembly_T66_contig_1/88480‑88613

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGCCCCAATCATCCCAGCATC  <  TrimmedAssembly_T66_contig_24/19315‑19181

GTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTA                                                                                                                                       <  1:2241080/136‑1

GTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTA                                                                                                                                       <  2:1272012/136‑1

GTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTA                                                                                                                                       <  2:943049/136‑1

GTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTA                                                                                                                                       <  2:1426326/136‑1

GTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTA                                                                                                                                       <  1:969674/136‑1

  GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAA                                                                                                                                     >  1:1143829/1‑136

  GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAA                                                                                                                                     >  1:2216356/1‑136

    TAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAA                                                                                                                                   >  2:635864/1‑136

         TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACA                                                                                                                                >  1:58817/1‑134

         TCATTCATGGGGAATGCCTCCTGTGATGATTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACAT                                                                                                                               <  1:283641/135‑1

                TGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCAT                                                                                                                        >  2:1111689/1‑135

                     AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAA                                                                                                                    >  1:354161/1‑134

                         CCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCAGTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTT                                                                                                              >  1:376887/1‑136

                                TGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTT                                                                                                       >  1:1408129/1‑136

                                 GATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTT                                                                                                      <  2:315801/136‑1

                                 GATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTT                                                                                                      >  1:1232553/1‑136

                                  ATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTT                                                                                                     >  1:1180374/1‑136

                                   TGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTA                                                                                                    <  2:2127128/136‑1

                                     TTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAA                                                                                                  >  1:1919774/1‑136

                                        TCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTA                                                                                               >  2:712440/1‑136

                                        TCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTA                                                                                               <  1:1207436/136‑1

                                         CTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAA                                                                                              <  1:521352/136‑1

                                         CTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAA                                                                                              <  1:85964/136‑1

                                         CTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAA                                                                                              <  2:159303/136‑1

                                               TTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACG                                                                                        >  1:2331343/1‑136

                                               TTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACG                                                                                        >  2:850473/1‑136

                                               TTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATAC                                                                                         <  2:968342/135‑1

                                                TACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGT                                                                                       >  1:2380450/1‑136

                                                TACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACG                                                                                        <  2:1919774/135‑1

                                                TACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACG                                                                                        <  2:552067/135‑1

                                                 ACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTG                                                                                      >  2:2537711/1‑136

                                                  CTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTG                                                                                      >  1:329806/1‑135

                                                    AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTCAAAAACATCTAGCATTCAAGCTTTTTAATTTATTAAATTAAAATACGTGTC                                                                                    >  2:2238785/1‑135

                                                    AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTC                                                                                    >  1:1756235/1‑135

                                                    AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTC                                                                                    >  2:2400724/1‑135

                                                    AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTC                                                                                    >  1:809926/1‑135

                                                    AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTC                                                                                    >  1:497390/1‑135

                                                       TATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCC                                                                                <  1:1484697/136‑1

                                                           ATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATT                                                                            >  1:930086/1‑136

                                                                 GAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAAT                                                                       <  1:1108776/135‑1

                                                                       ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAG                                                                >  1:666237/1‑136

                                                                       ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAG                                                                >  1:1807518/1‑136

                                                                       ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAG                                                                >  1:762179/1‑136

                                                                       ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAG                                                                >  1:1507036/1‑136

                                                                            CTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGA                                                           >  1:1296413/1‑136

                                                                                  CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCG                                                       >  2:2482507/1‑134

                                                                                  CTATACAATTCAGAAAACTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCG                                                       >  1:1571887/1‑134

                                                                                      ACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTT                                                 >  1:478520/1‑136

                                                                                        AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTA                                               >  2:491047/1‑136

                                                                                        AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTA                                               >  1:227627/1‑136

                                                                                        AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTA                                               >  1:1611754/1‑136

                                                                                        AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTA                                               >  2:384553/1‑136

                                                                                        AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTA                                               >  1:23553/1‑136

                                                                                            cAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACACAATTTTAATAAACCAGTATGATCCGCCTTTTTAACC                                            >  2:1108795/2‑135

                                                                                             AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCAC                                          >  1:2140585/1‑136

                                                                                             AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCAC                                          >  1:2005227/1‑136

                                                                                             AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCAC                                          >  2:2203406/1‑136

                                                                                             AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCAC                                          >  1:690181/1‑136

                                                                                             AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCAC                                          >  1:1244422/1‑136

                                                                                             AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTGTTAACCAC                                          >  2:2141043/1‑136

                                                                                                AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACCTCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGC                                        <  2:1736844/135‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:584011/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:1466170/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:804386/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:808872/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:898158/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:1735956/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:2216356/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:2000572/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:100552/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:185786/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:704735/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:712440/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:2537711/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:1791149/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:895655/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:2482507/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:1143829/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:1233698/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:1479425/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:1400511/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  1:2180509/136‑1

                                                                                                  TCTTTTATGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCATTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     <  2:1981092/136‑1

                                                                                                       taTGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAA                                <  1:1835376/134‑1

                                                                                                       taTGCATTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCA                                 >  1:2062331/3‑135

                                                                                                            aTTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGAT                           <  2:1507036/135‑1

                                                                                                            aTTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGAT                           <  2:1540385/135‑1

                                                                                                            aTTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGAT                           <  2:364295/135‑1

                                                                                                            aTTTACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGAT                           <  2:724110/135‑1

                                                                                                               TACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACA                        <  2:559149/136‑1

                                                                                                                ACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACAC                       <  2:161784/136‑1

                                                                                                                ACACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATAC                         >  2:1988877/1‑134

                                                                                                                 CACAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATAC                         >  1:1383398/1‑133

                                                                                                                   CAAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGC                    <  1:850473/136‑1

                                                                                                                    AAGATATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGCC                   <  1:960312/136‑1

                                                                                                                        TATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGCCCC                 <  2:884650/134‑1

                                                                                                                        TATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGCCCC                 <  1:624219/134‑1

                                                                                                                         ATTTTACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTA                                     >  2:1829192/1‑113

                                                                                                                              ACGCTCTCTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGCCCCAATCATC          >  1:547641/1‑135

                                                                                                                                     CTAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATATTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGCCCCAATCATCCCAGCATC  >  2:621874/1‑136

GTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  TrimmedAssembly_T66_contig_1/88480‑88613

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAAAACATCTAGCATTCAAGCTTTTTCATTTTTTAAATTAAAATACGTGTCACCCTATTTTAATAAACCAGTTTGATCCGCCTTTTTAACCACGCTTAATCAACTGATACACTGCCCCAATCATCCCAGCATC  <  TrimmedAssembly_T66_contig_24/19315‑19181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.