New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	TrimmedAssembly_T66_contig_17	1 =	0 (0.000)	58 (0.500) +GAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGA	23/158	1.3	69.5%	intergenic (–/+7)	–/rasttk_feature_annotation_tool=annotate_proteins_km er_v2	–/Aspartokinase (EC 2.7.2.4)
	?	TrimmedAssembly_T66_contig_9	= 79	85 (0.380)					intergenic (–/+180)	–/rasttk_feature_annotation_tool=elepa@bvbrc	–/hypothetical protein

AGCCAACGACAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  TrimmedAssembly_T66_contig_17/134‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑  <  TrimmedAssembly_T66_contig_9/79‑1                                                                                                                                       ||||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                  AGCCAACGACAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGA                                                                                                                                     <  2:1756774/136‑1    CAACGACAATATTAAATTAATCATGGTCAATCATTGCGCATCCGAAATTTCGATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGTATTTTTCGATTAACCCATACGAGG                                                                                                                                   <  1:1422346/135‑1    CAACGACAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGG                                                                                                                                   <  1:775019/135‑1    CAACGACAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGG                                                                                                                                   <  1:861440/135‑1    CAACGACAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAG                                                                                                                                    <  1:1135795/134‑1          CAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  1:2209862/1‑136          CAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  2:1106127/1‑136          CAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  2:130852/1‑136          CAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  2:2106427/1‑136          CAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  2:2106409/1‑136          CAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  1:1701059/1‑136          CAATATTAAATTAATCATGGTCAATCAAGGAGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  1:1752463/1‑136               TTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAG                                                                                                                       >  2:2453525/1‑136               TTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAG                                                                                                                       >  2:2093436/1‑136                TAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAG                                                                                                                       >  2:1549719/1‑135                 AAATTAATCATGGTCAATCAATGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTC                                                                                                                     <  1:1067067/136‑1                 AAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTC                                                                                                                     <  1:1549719/136‑1                 AAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTC                                                                                                                     <  1:1185521/136‑1                 AAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTC                                                                                                                     <  1:1377606/136‑1                     TAATCATGGTCAATCAAGGCGCATCCGAAATTTCTCTTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGGTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCGGTGACATAAGTCTCTA                                                                                                                 >  1:1681481/1‑136                     TAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTA                                                                                                                 >  1:1906181/1‑136                      AATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAG                                                                                                                <  2:750939/136‑1                      AATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAG                                                                                                                <  2:1877030/136‑1                      AATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAG                                                                                                                <  2:1478805/136‑1                          ATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAAC                                                                                                            >  2:1819103/1‑136                          ATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGAAGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGAGTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAAC                                                                                                            >  1:1779711/1‑136                               CAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGC                                                                                                       >  1:2313877/1‑136                                AATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCA                                                                                                      <  2:1386101/136‑1                                AATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCA                                                                                                      <  2:1062871/136‑1                                AATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCA                                                                                                      <  2:1062922/136‑1                                AATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCA                                                                                                      <  2:1062927/136‑1                                         GCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA                                                                                             >  1:1777769/1‑136                                             CCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAAT                                                                                         <  1:2340444/136‑1                                             CCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAA                                                                                          >  2:1669960/1‑135                                               GAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCT                                                                                       >  1:287845/1‑136                                               GAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCT                                                                                       >  2:113146/1‑136                                                  ATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG                                                                                    <  1:1033556/136‑1                                                          TATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTC                                                                            <  1:963374/136‑1                                                          TATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTT                                                                             >  1:1284839/1‑135                                                            TGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA                                                                          <  1:2100665/136‑1                                                                 GGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCT                                                                     <  2:901717/136‑1                                                                 GGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGA                                                                        >  1:571647/1‑133                                                                 GGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGA                                                                        >  1:24118/1‑133                                                                 GGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGA                                                                        >  1:24143/1‑133                                                                      ACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTT                                                                <  1:505612/136‑1                                                                           ACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATA                                                           >  2:1194000/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATA                                                      >  2:1276408/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATA                                                      >  1:2161552/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATA                                                      >  2:30624/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATA                                                      >  2:2171166/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATA                                                      >  2:1810904/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATA                                                      >  1:1594982/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTGTGATATAATA                                                      >  1:641908/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGAACTGCTTTTGATATAATA                                                      >  2:1022728/1‑136                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA                                                                          >  1:2116135/1‑116                                                                                GATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA                                                                          <  2:2116135/116‑1                                                                                  TGCCGATCAATCCGATATTGCTTTATATAAAGAAATTTACGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCATGTCTGGAAAAATCTTCTAATTTATCCAGTACTTCTTTTGATAAAATAta                                                    >  1:881361/1‑134                                                                                  TGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGA                                                    >  2:2182572/1‑136                                                                                  TGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGA                                                    >  1:1179055/1‑136                                                                                  TGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGA                                                    >  2:1121384/1‑136                                                                                  TGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGA                                                    >  2:889432/1‑136                                                                                  TGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGA                                                    >  1:633339/1‑136                                                                                  TGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTAGAATAACCCATAAGAGGATGTGAAATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAAGGATCTAATTTTTCCAGAAGTGCTTTTTATATAATAGA                                                    >  2:662330/1‑136                                                                                       ATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA                                               >  1:1751654/1‑136                                                                                       ATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA                                               >  1:1810134/1‑136                                                                                       ATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA                                               >  2:1602149/1‑136                                                                                       ATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA                                               >  1:842147/1‑136                                                                                       ATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA                                               >  1:2508654/1‑136                                                                                       ATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA                                               >  1:965354/1‑136                                                                                         CAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAA                                             <  1:2395657/136‑1                                                                                          AAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAA                                            >  1:1940740/1‑136                                                                                          AAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTT                                                                               >  1:1996887/1‑101                                                                                          AAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTT                                                                               <  2:1996887/101‑1                                                                                               GTTATTGCGTTATATAAAGATTTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGTAACAAAGAAGGTCTGGATAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATTATAGAAAATAAAAAAAga                                       <  1:2176491/136‑3                                                                                               GTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga                                       <  2:1019353/136‑3                                                                                                    TGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAG                                                                                                                <  2:86543/58‑1                                                                                                    TGCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAG                                                                                                                >  1:86543/1‑58                                                                                                     GCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG                                <  1:130852/136‑1                                                                                                     GCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG                                <  1:773491/136‑1                                                                                                     GCGTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTATTGATATAATAGAAAAT‑AAAAAAAGAGCATCG                                <  2:287845/136‑1                                                                                                       GTTATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT                              <  1:1331265/136‑1                                                                                                         TATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT                              <  2:842147/134‑1                                                                                                          ATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC                           <  2:1643721/136‑1                                                                                                          ATATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC                           <  1:113146/136‑1                                                                                                           TATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTTATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC                           >  1:1654429/1‑135                                                                                                           TATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC                           >  1:260088/1‑135                                                                                                           TATAAAGAATTTTTCGATTAACCCATACGAGGCTGTGAC                                                                                                                            >  2:579523/1‑39                                                                                                               AAGAATTTTTCGATTAACCCATACGATGCTGTGAAATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG                      <  2:1951391/136‑1                                                                                                               AAGAATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG                      <  2:1752463/136‑1                                                                                                               AAGAATATTTCGATCAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG                      <  2:2454509/136‑1                                                                                                                   ATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG                               >  1:536567/1‑123                                                                                                                   ATTTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG                               <  2:536567/123‑1                                                                                                                    tcTTTCGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCATCGAATTTTTCCAGACCTGCTATTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT                 <  1:2098206/134‑1                                                                                                                         CGATTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACG            <  1:1469054/136‑1                                                                                                                            TTAACCCATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAA         <  1:1106127/136‑1                                                                                                                                   ATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct  <  1:795945/136‑3                                                                                                                                   ATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct  <  2:1810134/136‑3                                                                                                                                   ATACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct  <  1:702094/136‑3                                                                                                                                       ||||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                  AGCCAACGACAATATTAAATTAATCATGGTCAATCAAGGCGCATCCGAAATTTCTATTATGTTCGGTGTACACGACAATGATGCCGATCAAGCCGTTATTGCGTTATATAAAGAATTTTTCGATTAACCCATAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  TrimmedAssembly_T66_contig_17/134‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑  <  TrimmedAssembly_T66_contig_9/79‑1

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.