| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_18 | = 53854 | 0 (0.000) | 176 (0.730) | 65/262 | 0.2 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_37 | = 853 | 0 (0.000) | intergenic (‑310/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– | |||||
Only 100 of 176 total aligned reads displayed.
GTAATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_18/53722‑53854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAA < TrimmedAssembly_T66_contig_37/853‑723 GTAATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAG < 1:2302423/135‑1 TAATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGA > 2:1552732/1‑135 CGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTG < 1:989738/136‑1 GTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGT > 2:1898039/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 1:828095/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 2:1372737/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 1:2313686/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 1:365543/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 2:908659/1‑136 CCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAA > 1:387497/1‑136 TGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCT < 2:1254814/135‑1 CCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTGTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGG > 2:2324128/1‑135 GACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACA < 1:2466564/136‑1 GACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACA < 2:44727/136‑1 CACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTGCTTAGAACCTGTTTAAAATCTGGACAATTT > 1:2210174/1‑136 ACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC > 1:2516502/1‑136 ACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC > 2:1787243/1‑136 ACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC > 2:934286/1‑136 ACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC > 1:1150728/1‑136 CAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑A > 1:732140/1‑136 AAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AA < 1:915975/136‑1 AGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATGTGATAGTTC‑AAA < 2:1098702/136‑1 CAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGGTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAA > 2:2509150/1‑136 CAGTGGCCCAGAAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCTTGAAGTAATCACGGACATTCTTAGACCCGGTTTAAAAACTGGACAATTTGATATGAAAGTAC‑AAAAA > 1:520392/1‑136 GTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAA > 2:2227805/1‑136 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGAT < 1:797878/135‑1 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGAT < 1:1226958/135‑1 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGAT < 2:260662/135‑1 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGAT < 1:845270/135‑1 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGAT < 1:1931596/135‑1 CCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGAACGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGAT < 2:616557/135‑1 AACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAA < 2:1309325/135‑1 GGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTATAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATTATAcataat > 2:1480213/1‑130 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGA > 2:2405335/1‑136 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTAT < 1:1993997/134‑1 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTAT < 1:1272544/134‑1 GAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTAT < 1:74912/134‑1 AATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGA > 1:539339/1‑135 ATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACTGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAAC < 1:1780593/136‑1 ATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAAC < 2:2068806/136‑1 ACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTAC > 2:1620066/1‑135 CCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCC < 2:2529857/136‑1 ATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCC < 1:267356/136‑1 CGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGAT < 1:1779142/105‑1 TTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACG < 1:1719797/136‑1 TTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGC > 1:1196322/1‑136 TTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGC > 1:577520/1‑136 TTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGC > 1:1991144/1‑136 GTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCA < 2:950499/135‑1 GTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACC < 1:979913/134‑1 TCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACATTTTGATATGATAGTTC‑AAAAATAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGAACCAATTT < 1:1920174/134‑1 TCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTT < 1:1244449/134‑1 TCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTT < 2:539339/134‑1 TCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTT < 1:2135256/134‑1 TCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTT < 2:1749241/134‑1 TGAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAAT > 1:414362/1‑136 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAATATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGTTAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAGTTTGAACTAAg > 2:371198/1‑134 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAATATCTGGACAATGTGATATGATAGTGC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAAT > 2:1841726/1‑135 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGACCTAAT > 2:1757533/1‑135 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAAT > 2:839144/1‑135 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAAT > 2:1769919/1‑135 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACG < 1:230233/117‑1 GAGATGATCGTGATGTTATCACGGACGTTCTTAGAACCGGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAAATACCCCAGCAATCCCTCACGGCACCCATTTGAACTAAT > 2:721146/1‑135 GAGATGATCGTGATGTAATCACGGACGTTCATATAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATTATAACATATGAACTACCACAGCAATCCATCACGGCACCAATTTGAAATAAT > 1:459417/1‑135 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGG < 2:1817224/135‑1 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCG < 2:2076582/134‑1 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCG < 1:2381873/134‑1 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCG < 2:1922493/134‑1 TGATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCG < 1:1898039/134‑1 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:2050472/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:2018327/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:104861/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 1:1472418/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCC > 2:2264027/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATGTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTACTTCGGCCC > 1:711983/1‑136 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGA > 2:1541851/1‑47 ATCGTGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGA < 1:1541851/47‑1 TGATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATT > 2:1347642/1‑136 GATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTT < 2:1833510/136‑1 GATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTT < 1:1552732/136‑1 GATGTTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTT < 2:1147933/136‑1 TTATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAA > 1:1758544/1‑136 TATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAG < 2:1203545/136‑1 TATCACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTT < 1:2427186/131‑1 CACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 1:1450041/1‑135 CACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 1:1211843/1‑135 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 2:166136/1‑134 ACGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCA > 1:947779/1‑134 CGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCT < 2:1227276/136‑1 CGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCT < 2:1183316/136‑1 CGGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCT < 2:828095/136‑1 GGACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTCAAAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCT < 1:135339/136‑1 ACGTTCTTAGAACCTGTTTAACATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGAGAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 2:1431797/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 2:24614/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:1347642/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:1822505/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:1941162/135‑1 ACGTTCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 1:1016219/135‑1 ACGTTCTTAGAACCTGTATAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCG < 2:237247/135‑1 TCTTAGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAA > 2:1284691/1‑135 GTAATCGTTATCCCGATGCCGACGCACAGGAGTTACGACAAGCAGTGGCCCAGCAACAGGGAATCGACCCGAATAGCATCGTTTTTAGTGTAGGTCTTGATGAGATGATCGTGATGTTATCACGGACGTTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_18/53722‑53854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGAACCTGTTTAAAATCTGGACAATTTGATATGATAGTTC‑AAAAAAAGGATGATAACTTATGAACTACCCCAGCAATCCCTCACGGCACCAATTTGAACTAATTCGGCCCGATTTAGAAGCAGCTCGGCAA < TrimmedAssembly_T66_contig_37/853‑723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |