| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_20 | = 39141 | 0 (0.000) | 81 (0.700) | 30/158 | 0.6 | 66.1% | intergenic (+93/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | L‑lactate dehydrogenase (EC 1.1.1.27)/– |
| ? | TrimmedAssembly_T66_contig_9 | = 79 | 83 (0.620) | intergenic (–/+180) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 132 total aligned reads displayed.
TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_20/38958‑39141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggctgtgacataagtctctagaaacaaagcaggtctggaaaaatcttcggATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC < TrimmedAssembly_T66_contig_9/79‑1 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 2:1888798/136‑1TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 2:2535682/136‑1TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 1:136823/136‑1TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGG < 1:2432648/136‑1TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAG < 2:1751283/135‑1 TTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGT > 1:530093/1‑136 TGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTG < 2:702929/136‑1 TCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAA > 2:1678324/1‑136 CACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCCAAAAGGCGAGGCTGTGACATCAG > 1:1125619/1‑136 CACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAG > 1:1288260/1‑136 CACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAG > 1:249436/1‑136 CACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAG > 1:23344/1‑136 CACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAG > 1:23495/1‑136 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 2:488990/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:2114278/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 2:1796548/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 2:91230/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:861548/136‑1 CGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:1033832/136‑1 GAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGTAAGTCAGAACGACTAATCAGCACTCAAACGTCAACGATCTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAG < 2:1490338/136‑1 GAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAG < 2:1774269/136‑1 ATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACA < 1:1546400/136‑1 ATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACA < 2:812517/136‑1 AAAAATTACCAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTACCACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCA < 2:1727403/136‑1 AAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 1:2103484/1‑136 AAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 1:291205/1‑136 AAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTATCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGG > 2:647764/1‑136 GCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:605858/104‑1 TGATTATATCCAGACCAAGGACGCTGAAAGTCAGAACGACTAATCAGCACTCCAACGTCAACTAACTAACACTTTCAAACAGGCGAGGCTTTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 2:146301/135‑1 TGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 1:1535018/135‑1 TGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 2:620791/135‑1 CAAGACCAAGTACGCTGAAAGTCAGACCGACTACACAGCAATCAAACGTCAACGAACTACCACTTTCAAACAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:1384817/136‑1 CAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACCCTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:256284/136‑1 CAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:2129858/136‑1 CAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:1402003/136‑1 CAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:2519791/136‑1 CAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:893656/136‑1 CAAGACCAAGTACGCCGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 2:1629746/136‑1 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 2:31275/1‑135 CAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 1:1586004/1‑135 CAAGTACGCTGAAAGTCAGACAGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAATGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCT > 1:2264691/1‑135 AAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGC < 2:1950916/136‑1 ACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTT > 2:22428/1‑136 ACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:1793302/125‑1 ACGCTGAAAGTCAGACCGACTAATCAGCAATCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTT > 2:588446/1‑136 CGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTG > 2:2286402/1‑136 GAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAATAAAGCA < 2:2067880/92‑1 GAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATAT > 1:2519223/1‑136 AAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATA > 2:938796/1‑136 AAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATA > 1:1868935/1‑136 AAGTCAGACCGACTAATCAGCACTCAAACGTCAACGACCTAACACTTTCAAAAAGGCGAGGCTGTGACAGAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAA > 2:1228094/1‑136 GTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATA > 1:1491453/1‑136 GACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAA < 2:1229787/136‑1 GACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAA > 2:826800/1‑136 AATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAA > 1:859323/1‑136 AATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAA > 1:1707305/1‑136 AATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAA > 1:2020305/1‑136 AATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAA > 2:431163/1‑136 CAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga < 1:1036256/136‑3 TCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG > 2:2131853/1‑136 TCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1041972/136‑1 TCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTATAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:1630697/136‑1 CAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG > 1:1396020/1‑136 AAACGTCAACGAACTCACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:794795/136‑1 CGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAAGAGAAAAT‑AAAAAAAGAGCATCGGTCGC < 2:2103484/136‑1 CGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTG > 1:1582641/1‑102 CGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTG < 2:1582641/102‑1 CGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTG < 2:1582636/102‑1 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:1296565/136‑1 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 2:1249805/1‑136 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 1:716746/1‑136 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:1114545/136‑1 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 1:2131853/136‑1 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG > 1:2455647/1‑136 ACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCG < 2:1468303/136‑1 AACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT > 1:649553/1‑135 AACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGAT > 2:1860329/1‑135 ACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:1004784/38‑1 ACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTC < 1:1004756/38‑1 CTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT < 2:1004588/136‑1 CACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTAC > 2:1216358/1‑136 CAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT < 1:1289451/136‑1 AAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 2:2257044/1‑136 AAAAGGCGAGGCTGTGACATAAGTCTCTCGAAACAAAGCAGGACTGGAAAAATCATCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATaa > 2:1776986/1‑133 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga < 2:336900/103‑3 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga > 1:336900/1‑101 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCTCCCGATACTCTACGAAATTA > 2:484816/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTAT < 2:2147943/136‑1 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 2:1858323/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 1:1504702/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 1:2452151/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 2:77222/1‑135 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT < 2:1565091/124‑1 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACT > 1:1565091/1‑124 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA > 2:2005646/1‑68 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:2005646/68‑1 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCA < 1:2005656/68‑1 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAG > 2:1004756/1‑38 AAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAG > 2:1004784/1‑38 GGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGGATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACC > 1:459334/1‑109 TCAATTGGATCTCACGGACGAAGAATTGAAAAAATTACAAGTTTCAGCTGATTATATCAAGACCAAGTACGCTGAAAGTCAGACCGACTAATCAGCACTCAAACGTCAACGAACTAACACTTTCAAAAAGGCGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_20/38958‑39141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggctgtgacataagtctctagaaacaaagcaggtctggaaaaatcttcggATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC < TrimmedAssembly_T66_contig_9/79‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |