| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_22 | 1 = | 0 (0.000) | 295 (0.680) | 76/262 | 0.0 | 100% | coding (1/168 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein |
| ? | TrimmedAssembly_T66_contig_41 | = 437 | 0 (0.000) | coding (435/435 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Mobile element protein | |||||
Only 100 of 295 total aligned reads displayed.
TTGGGAACCAAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_22/135‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGGACA < TrimmedAssembly_T66_contig_41/437‑305 TTGGGAACCAAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCT < 1:532494/136‑1TTGGGAACCAAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCT < 2:2302088/136‑1 ACCAAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTA > 2:829396/1‑136 ACCAAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTA > 1:524609/1‑136 AAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAA < 1:2196400/136‑1 AAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAA < 1:955923/136‑1 GTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGC > 1:1761176/1‑135 TTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGC < 2:414663/134‑1 TTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGC < 2:2221801/134‑1 TTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGC < 2:1706062/134‑1 TCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCAC < 2:646075/135‑1 ATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTA > 1:712024/1‑135 ATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAA > 1:1183117/1‑127 ATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAA < 2:1183117/127‑1 ATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGGTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTA > 2:29684/1‑135 ATAAACTTTTCAAAGGCGCTAGTTAAGGCCTTGGCAGGTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTA > 2:1430608/1‑135 TAAACATTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATC < 2:2516326/136‑1 TTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTT > 2:354882/1‑135 TTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCC < 2:1403482/136‑1 TTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCC < 1:565966/136‑1 TTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCC < 2:2425829/136‑1 TTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCC < 1:1371118/136‑1 CGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGAC < 1:177348/135‑1 TATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAA > 1:2267570/1‑136 TATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCC < 2:1844898/125‑1 TATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCC > 1:1844898/1‑125 ATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAA < 1:1652987/136‑1 AGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAA < 1:2409245/136‑1 AGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAA < 1:2328125/136‑1 AGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAA < 2:932262/136‑1 AGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAA < 1:1873602/136‑1 CTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGACCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGT > 2:1685174/1‑136 TGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTG < 1:1682933/136‑1 TGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTG < 1:649606/136‑1 GGCATTTCGGTTAGGGGCTTTGATGTCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATTATCGTGACTCACCTCGACTAGAAAGCACCTTATCTACTTACCAATGACCAAAAGCTAACCGTTGA > 1:1262352/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:1013868/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:1070228/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:1470340/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:2022562/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:1499564/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:1277332/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:1231105/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:852997/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:380184/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGAT < 1:1917483/135‑1 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGAT < 2:1112887/135‑1 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAA > 1:115033/1‑127 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGACCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 1:2350879/1‑136 CAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTCACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATT > 2:727021/1‑136 AGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTA > 2:49755/1‑136 GGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGT > 2:2055029/1‑136 TTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTT < 1:59677/135‑1 GGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGG < 2:1732680/135‑1 ATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGT > 2:451870/1‑135 ATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGT > 2:693929/1‑135 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:998444/1‑136 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC < 2:485711/136‑1 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:485711/1‑136 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC > 1:1953174/1‑136 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTC < 2:1630206/136‑1 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTT < 2:567707/135‑1 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCG < 1:1993505/109‑1 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCG > 2:1993505/1‑109 TGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAAACAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGATGTTGGCCGTAGTac > 1:265214/1‑134 CATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGACAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGCTTAACAGTTGTTGGCCGGTGTTCGATG > 2:2397667/1‑135 ATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGA > 2:2131856/1‑136 AGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAG < 1:1617689/136‑1 GGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACT > 1:2225574/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTT > 1:1572192/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTT > 1:105056/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTT > 1:441308/1‑136 GGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTT > 1:414830/1‑136 TCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGT > 2:179359/1‑136 CGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATT > 2:855222/1‑136 CGTTCTACGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATT > 1:9490/1‑136 CGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACG > 1:1419190/1‑136 CGAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACG > 2:191701/1‑136 GAATGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGA > 2:1643386/1‑136 TGTAACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTT < 1:2151505/136‑1 AACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTC < 2:2156657/135‑1 AACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTC < 2:2269930/135‑1 AACCAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTC < 1:862066/135‑1 CCAGACATGATCGTGACTCACCTCGACTAGAAAGCACAGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTTTTCGATGGAAGTCCCACTTGTAAATTTCAAACGAGTTTCtc > 2:1160127/1‑133 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 1:179359/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:1898401/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 1:1767696/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:1608460/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 1:2027879/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 1:1366426/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:131659/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:2341108/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 1:1432022/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:2254851/136‑1 CAGACATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTC < 2:1470340/136‑1 CATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACT < 1:1704525/135‑1 ATGATCGTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCG < 2:614480/136‑1 GTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTG < 1:130406/136‑1 GTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTG < 2:1761368/136‑1 GTGACTCACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTG > 1:317455/1‑136 ACCTCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGGTGGTGGACA > 2:1496192/1‑136 TTGGGAACCAAAGGTTCCCATAAACTTTTCAAAGGCGCTATTTAAGGCCTTGGCAGTTCGGTTAGGGGCTTTGATGGCCCATAGAAGTCGGGTCTTACGTTCTACGAATGTAACCAGACATGATCGTGACTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_22/135‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGACTAGAAAGCACCGTATCTACTTCCCAATGACCAAAAGCTAACCGTTGATTAACAGTTGTTGGCCGTTGTTCGATGGAAGTCCCACTTGTAAATTTCCCACGATTTTCGCTCACTCGGTGCTGGCGGACA < TrimmedAssembly_T66_contig_41/437‑305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |