| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_28 | 1 = | 0 (0.000) | 294 (0.480) | 79/262 | 0.0 | 100% | intergenic (–/+125) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | TrimmedAssembly_T66_contig_4 | = 245870 | 0 (0.000) | intergenic (‑69/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Asn‑GTT/– | |||||
Only 100 of 294 total aligned reads displayed.
ACTTAACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_28/135‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < TrimmedAssembly_T66_contig_4/245870‑245737 CCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTC < 2:1921191/136‑1 CCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTC < 1:145872/136‑1 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTTTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:74527/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:1312640/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:2346275/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:2469999/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:362983/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:1000382/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:1100941/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:1188510/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:909751/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:139546/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:1722856/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:1843550/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:2439930/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:2492054/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:578035/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:768343/1‑136 CAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 1:112728/1‑136 CAAGTAATTGGTGGTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:1641993/1‑136 CAAGTAATTGGAGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCT > 2:2304526/1‑136 ATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGC < 1:2115203/136‑1 CATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTTGCGCCGAGAGTAGTTGGGG > 2:2376316/1‑136 CATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGG < 2:2340975/136‑1 GAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGG < 2:704506/131‑1 GAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGG > 1:704506/1‑131 TATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 2:1128993/136‑1 TATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 2:258381/136‑1 ATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCT < 1:264419/136‑1 ATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCT < 1:2367410/136‑1 TGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCG > 2:613944/1‑136 GATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGA < 1:481418/136‑1 AGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACTATGGCGAGAATGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGTGGATCGCTCCCTGCGAGGGTAGGACG > 1:803929/1‑136 AGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACG > 1:2066698/1‑136 AGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACG > 2:1551640/1‑136 TTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTG < 1:1913128/136‑1 AGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCAT > 1:5475/1‑136 GCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCG > 2:187314/1‑136 GCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGC < 2:1463667/135‑1 tttAGTTTCAC‑ATAGTGTGGTGATGATGGCGAGAAGGATACACCTGTTCCAATGTAGAACACAGAAGTTAAGCTTCTTAGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGAaa < 1:2042540/133‑3 AAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTA < 2:218677/136‑1 AAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTA < 1:1388819/136‑1 AAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTA < 1:613944/136‑1 AAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTAGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTCGCCATGCGAaat > 2:1151575/1‑133 AAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTT < 2:2246937/74‑1 TTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTC < 1:2393318/135‑1 TTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTC < 2:323827/135‑1 TTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTC < 2:502968/135‑1 TCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCG < 2:1699197/136‑1 CAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACA > 1:1410668/1‑136 ATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATA > 2:1994381/1‑136 ATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATA > 1:1306323/1‑136 ATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC > 1:384901/1‑97 ATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCC < 2:384888/97‑1 TGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACAT < 1:2459024/129‑1 GGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGT > 2:2467739/1‑136 GGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTC > 1:1222053/1‑133 GACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTG < 2:1628446/135‑1 GACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTG < 1:2250655/135‑1 GACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTG < 1:2220442/135‑1 CGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGG < 1:948193/97‑1 GCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTC > 1:1033507/1‑123 GCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTC < 2:1033507/123‑1 GCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTAGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGAaat > 1:1581788/1‑106 GAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCT > 1:304343/1‑136 GAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTG > 2:2353421/1‑136 GAAGGATACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCACAGTTGGTAGAGCGCTTG > 1:1799267/1‑136 TACACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTT < 1:1502561/136‑1 CACCTGTTCCCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAA < 1:1680693/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGTACGTTGCCATGAGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:586878/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 1:2304526/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 2:1293714/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 1:337705/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGT < 1:1874060/136‑1 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 2:287490/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:217607/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:2014803/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:868482/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:124096/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:1341980/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:1974356/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 2:852620/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:721195/1‑135 CCATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATG > 1:1531066/1‑135 ATGTCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCG > 1:414759/1‑136 TCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACG > 2:2133755/1‑136 TCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACG > 1:567823/1‑136 TCGAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACG > 2:439742/1‑136 GAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGT > 1:1814851/1‑136 GAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGT > 2:401465/1‑136 GAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGT > 1:1081175/1‑136 GAACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACAGTTAATCAAGATGTCGACGGT > 1:1183208/1‑136 ACACAGAAGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTT < 2:2039619/135‑1 AGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCC < 2:803929/134‑1 AGTTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATAGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCC < 1:638545/134‑1 TTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCG > 2:1349187/1‑134 TTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCG > 1:1924686/1‑134 TTAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTCCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTGGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCG > 2:1260002/1‑134 TAAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < 2:950320/135‑1 TAAGCGTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < 1:105304/135‑1 ACTTAACCAAGTAATTGGTGTTCCGGTTCATATGAAGATATTTGATATTGTCTAGTTTTGAGAGCACAAGTTTCTCAATAGTGTGGTGACGATGGCGAGAAGGATACACCTGTTCCCATGTCGAACACAGAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_28/135‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCTTCTTGGCGCCGAGAGTAGTTGGGGGATCGCTCCCTGCGAGGGTAGGACGTTGCCATGCGATTATTCCGACATAGCTCAGTTGGTAGAGCGCTTGACTGTTAATCAAGATGTCGACGGTTCGAGCCCGCC < TrimmedAssembly_T66_contig_4/245870‑245737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |