| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_32 | = 1640 | 0 (0.000) | 226 (0.670) +TTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAA |
52/162 | 0.0 | 80.8% | intergenic (+24/–) | rasttk_feature_creation_tool=RNA_reps_SSU_rRNA/– | SSU rRNA ## 16S rRNA, small subunit ribosomal RNA/– |
| ? | TrimmedAssembly_T66_contig_7 | = 137493 | 175 (1.130) | noncoding (69/71 nt) | rasttk_feature_creation_tool=tRNAscan‑SE | tRNA‑Gly‑TCC | |||||
Only 100 of 393 total aligned reads displayed.
CGGTGGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_32/1507‑1640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTTTGGAG < TrimmedAssembly_T66_contig_7/137493‑137402 |||||||||||||||||||||||||||||||||||||||||||||||||| CGGTGGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACAT > 1:250966/1‑135 GGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTC > 1:2051899/1‑136 GGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTC > 2:2279590/1‑136 GGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCG > 2:886730/1‑136 TAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAA < 1:2372847/135‑1 CTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTT < 1:671721/136‑1 GGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAACCTTTGTTTAG > 1:522287/1‑136 GGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAG > 1:1678129/1‑136 GAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTACGAAACTTTTTTTAGT > 1:1914970/1‑136 ACCAGCCGCCTAAGGTGGGACAGATGAGTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTT < 2:23260/136‑1 CCAGCCGCCTAAGGTGTGACAGATGATTAGGGTGAAGTCGTAACTAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGACACTTTGTTTAGTTTT < 2:1172485/136‑1 CCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTT < 2:2082966/136‑1 CCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTT < 1:589212/136‑1 CCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTT < 1:1719294/136‑1 CCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTT < 2:685909/136‑1 CCAGCCGCCTAAGGTGGGACAGATGAGTCGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGACTATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTT < 2:1362979/136‑1 CCAGCCGCCTAAGGTGGGAAATATTATTAGGGTGAAGTCTTAACAAGGTAGCCGTAGTAGTACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACAAATTATTCGAAACTTTGTTTAGTTTT < 2:1388181/136‑1 GCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAG > 1:1878274/1‑136 GCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGG > 1:488271/1‑136 AGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAA > 2:1045180/1‑136 AGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGACTATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATT > 2:2366433/1‑136 AGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATT > 2:245996/1‑136 AGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATT > 2:593167/1‑136 AGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATT > 1:176318/1‑136 ATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATA > 2:1892862/1‑136 ATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATA > 2:953944/1‑136 ATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATA > 1:860481/1‑136 TTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAA < 1:1175858/136‑1 TAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAA > 2:1987776/1‑135 GAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTT < 1:1248416/136‑1 GAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTT < 2:225426/135‑1 GAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTT < 2:1823914/135‑1 GAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTT < 2:1550694/135‑1 GAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTT < 2:1721046/135‑1 AGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTTAGGAATATTACGGAAAACTACACATTATTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTT < 2:1463326/135‑1 AGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTT > 2:2024221/1‑136 AGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTT < 1:2233290/135‑1 TCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGG > 1:1428371/1‑136 CGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGG > 2:388336/1‑135 CAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTAT > 1:808959/1‑136 CAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTAT > 1:2528893/1‑136 CAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTAT > 2:1873419/1‑136 CAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTT > 1:1924965/1‑125 TAGCCGTAGGAGTACGTGCGGCTGGATCACCTCCTTTCTAAGGAATTTTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 2:1914970/135‑1 TAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAATGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 2:1417494/135‑1 TAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 2:2012905/135‑1 TAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 1:1623297/135‑1 TAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 1:92184/135‑1 TAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 1:1987776/135‑1 TAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 1:1075487/135‑1 TAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGG > 2:1214987/1‑136 TAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCT < 2:1080245/129‑1 AGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGT < 1:35224/136‑1 AGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGT < 1:2164581/136‑1 GAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGT < 1:1003949/132‑1 ACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCGATAGCTCAGCTGGTTTAGA < 2:833710/135‑1 CCTGCGGCTGGATCTCCTCCTTTCTATGGAATATTACGCAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGTGTTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGC < 1:1018949/136‑1 CCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGC < 1:968457/136‑1 CTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGC > 1:1349096/1‑135 CTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCGGGTTTAGAGC > 2:2168114/1‑135 TGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGC < 1:1111747/136‑1 TGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGC > 1:2122371/1‑136 GCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGC > 1:500003/1‑135 TGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT < 2:1254494/136‑1 TGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT < 1:1396514/136‑1 TGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT < 1:2427124/136‑1 TGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT < 1:1466999/136‑1 TGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT < 2:916626/136‑1 ACCTCCTTTCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAG < 2:1517693/136‑1 TCTAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGT < 1:2279590/136‑1 TAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTATCTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCG > 1:2383450/1‑136 TAAGGAATATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCG > 1:1087248/1‑136 TATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTC < 1:1214987/136‑1 ATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCA < 2:1938463/136‑1 ATTACGGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCA < 2:1678129/136‑1 GGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTTGTACTATAGCTCAGCTGGTTTAGAGCTCACTACTGATAATCGTGAGTTCGATTTTTAAAGTCC > 2:1805351/1‑136 GGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCC < 1:1550443/136‑1 GGAAACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCC < 2:2528893/136‑1 ACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTT < 2:2061177/136‑1 ACCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCGCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTT < 2:2133657/136‑1 CCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTA > 2:2489425/1‑136 CCTACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTA < 2:2431267/136‑1 TACACATTCTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCAGTTAG > 2:447820/1‑135 CTTCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTgg < 2:1138311/136‑3 TCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTggaa < 2:356653/136‑5 TCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTgga > 2:2394990/1‑132 TCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTgga > 2:1579833/1‑132 TCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTgga > 1:694190/1‑132 TCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTgga > 1:399858/1‑132 TCGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTgga > 2:972957/1‑132 CGAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTggaac < 1:293339/136‑6 GAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTggaacc > 2:2075531/1‑130 GAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTggaacc > 2:1738956/1‑130 GAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTggaacc > 2:266054/1‑130 GAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTggaacc > 2:652583/1‑130 GAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTggaacc < 1:245996/136‑7 GAAACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT > 1:423192/1‑88 AACTTTGTTTAGTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGC < 1:1820019/78‑1 GTTTTGAGAGGTCTAACTCTCAATTTAATAAGCGTTT < 1:2014731/37‑1 TTAATAAGCGTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCT < 2:496423/51‑1 |||||||||||||||||||||||||||||||||||||||||||||||||| CGGTGGGGTAACCTTTTAGGAACCAGCCGCCTAAGGTGGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTTCTAAGGAATATTACGGAAACCTACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_32/1507‑1640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTTTTTTTGGGCCTATAGCTCAGCTGGTTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAAGTCCATTTAGGCCCATTTTGGAG < TrimmedAssembly_T66_contig_7/137493‑137402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |