| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | = 88613 | 132 (0.880) | 129 (0.860) | 42/262 | 1.0 | 66.1% | coding (224/300 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_1 | = 655835 | 0 (0.000) | intergenic (‑78/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– | |||||
Only 100 of 129 total aligned reads displayed.
TAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88484‑88613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTT < TrimmedAssembly_T66_contig_1/655835‑655713 AGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATT < 1:662646/136‑1 AGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATT > 2:1038012/1‑136 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:285350/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:2182713/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:2086234/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:2058085/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1496056/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1418219/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1281112/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1204142/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:249070/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:78444/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:351293/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:514166/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1075118/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:773923/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:774531/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1915827/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1153490/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:548266/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:349876/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:321499/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1612514/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1786999/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC > 1:1639461/1‑135 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:2282494/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1716184/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:2353964/135‑1 TCATTCATGGGGAATGCCTCCTGTGATGTAGTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCCTTAATTGC < 2:1223378/135‑1 TCATTCAGGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 2:1678958/135‑1 GAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTAT < 1:2211514/135‑1 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAA > 2:141099/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAA > 1:2207899/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAA > 2:2352287/1‑136 GCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAG < 1:1741049/136‑1 TGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTG > 1:2165510/1‑111 TGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTG < 2:2165510/111‑1 GATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTC < 2:2431751/136‑1 GATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTC < 2:380706/136‑1 GATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATT < 2:358783/135‑1 TTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAA > 1:409941/1‑135 TTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC > 1:215629/1‑107 TCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGG > 1:943927/1‑136 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTT > 1:947165/1‑136 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATT < 2:866660/136‑1 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATT > 2:1076672/1‑136 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATT > 2:2117464/1‑136 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC > 2:1640222/1‑99 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGC < 1:1640222/99‑1 TTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTC > 1:2243207/1‑136 TACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTC < 2:1704483/135‑1 TACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTC < 2:2207899/135‑1 AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGG > 1:692250/1‑136 AAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGG > 1:1850424/1‑136 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCATAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:141598/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:2172918/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:2172907/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:579533/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:2187999/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 2:1229805/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:1370203/136‑1 ATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAA < 1:2356889/136‑1 CATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCAC < 1:1038012/136‑1 ATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACG > 1:1240787/1‑136 AAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAG < 2:1530638/136‑1 AAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAG < 2:681919/136‑1 AAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAG < 1:764287/136‑1 CATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGG < 2:674682/135‑1 CTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTC > 1:1101945/1‑136 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATATTACGCTCTCACTTAATAGCGCACTGCCTATAATAGGCGTTATTCAAATCGGTAATTACATTGGAATCACGAGTTAGGGGGGAGCGTCA > 1:1562750/1‑136 ATTTCTATACTATTCAGCAATCTTTTATGCATTTACACAAGATATTTTCCGCTCTCACTTAATTGCGCACTGCCTATACTAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCAT < 2:286757/136‑1 ATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCAT < 1:1529781/136‑1 AATTCAGAAATCTTTTATGCATTTTCACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTGATGTCATTGGAATCAAGAGTTAGGGGGGAGCGTCTTGCGGATACG > 1:2452521/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 2:395686/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 2:1938165/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 2:198472/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 1:872837/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 1:972033/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 1:2452518/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACG > 2:1328701/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTA‑GGGGGAGCGTCATGCGGATACGTC > 1:815601/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCAAATCGGTTATTTCATTGGAATCACGAGTGAGGGGGGAGCGTCATGCGGATACG > 1:2075699/1‑135 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGATATTCAAATCGGTTATTTCATTGTAATCAAGAGTTATGGGGGAGCGTCATGCGGATACG > 2:2406596/1‑135 ATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTC < 1:534956/136‑1 cAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGA > 1:1944051/2‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 1:2026197/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:2080216/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:1281023/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:1281080/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 2:2152332/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 1:23256/1‑136 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACC > 1:1744422/1‑136 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTC > 2:1432701/1‑136 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTC > 2:169973/1‑136 TGCATTTACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTA > 2:1269678/1‑136 ACACAAGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCA > 1:506848/1‑136 AGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTG < 2:1068660/136‑1 AGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTG < 2:843327/136‑1 AGATATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTG < 2:2022500/136‑1 ATTTTACGCTCTCACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTT > 1:2430322/1‑136 TAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88484‑88613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTAATTGCGCACTGCCTATAATAGGCGTTATTCCAATCGGTTATTTCATTGGAATCACGAGTTAGGGGGGAGCGTCATGCGGATACGTCGACCGGTTCGGTTTTATCGCTCATTTTGGTTT < TrimmedAssembly_T66_contig_1/655835‑655713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |