New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? TrimmedAssembly_T66_contig_1 = 88613132 (0.880)209 (1.240) 67/262 0.0 76.0% coding (224/300 nt) rasttk_feature_annotation_tool=elepa@bvbrc hypothetical protein
?TrimmedAssembly_T66_contig_16 1 = 0 (0.000)intergenic (–/‑89) –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 –/PTS system, beta‑glucoside‑specific IIB component / PTS system, beta‑glucoside‑specific IIC component / PTS system, beta‑glucoside‑specific IIA component

Only 100 of 1590 total aligned reads displayed.

CTGTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGATAGTGGCGTAGTCTTGTAGATAAATCCAAGCGACTAAATCATACTTATCATGAAAATGATAGTAGAAAGCTTGTGGGGTTGCTCCTGCAGCTTTAGCTAAATG  >  TrimmedAssembly_T66_contig_1/88478‑88746
                                                                                                                                       |                                                                                                                                     
  gtgGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGTGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCta                                                                                                                                     <  1:1821905‑M1/136‑3 (MQ=255)
    ggTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgat                                                                                                                                   >  1:339485‑M1/1‑132 (MQ=255)
    ggTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtatt                                                                                                                                   <  2:527263‑M1/136‑5 (MQ=255)
    ggTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtatt                                                                                                                                   <  2:24139‑M1/136‑5 (MQ=255)
           tcattcatGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaaca                                                                                                                              <  2:1790199‑M1/134‑10 (MQ=255)
           tcattcatGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCacttaattgc                                                                                                                             <  1:1915827‑M1/135‑11 (MQ=255)
           tcattcatGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCacttaattgc                                                                                                                             <  2:2058085‑M1/135‑11 (MQ=255)
                catGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttg                                                                                                                       <  2:810831‑M1/136‑17 (MQ=255)
                catGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttg                                                                                                                       <  2:2489486‑M1/136‑17 (MQ=255)
                 atGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgttgtggactagtc                                                                                                                      <  2:1574549‑M1/136‑18 (MQ=255)
                       aaTGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAg                                                                                                                               >  1:2118150/1‑121 (MQ=255)
                       aaTGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtattacacacatgaggtgttaat                                                                                                                >  1:2151012‑M1/1‑113 (MQ=255)
                          gCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACACTTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaata                                                                                                             <  2:1119464‑M1/136‑27 (MQ=255)
                            ctcctGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGCAGGCATTCCCTATTTATATACAATTCATAAATATTTTATGCATTTACACAAGATAATTTACGCTCTCttcgttgtggactagtcgtcaaactgt                                                                                                            <  1:2404926‑M1/135‑28 (MQ=255)
                              cctGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGa                                                                                                         <  2:2147709/136‑1 (MQ=255)
                                tgtgATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttc                                                                                                       >  1:2176990‑M1/1‑105 (MQ=255)
                                  tgATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtattacacacatgaggtgttaataatatatgtaa                                                                                                     >  2:142011‑M1/1‑102 (MQ=255)
                                  tgATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcat                                                                                                     >  1:986593‑M1/1‑103 (MQ=255)
                                   gATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttt                                                                                                    <  2:315801‑M1/136‑36 (MQ=255)
                                   gATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttt                                                                                                    >  1:1232553‑M1/1‑101 (MQ=255)
                                     tGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcg                                                                                                  <  1:1142639‑M1/136‑38 (MQ=255)
                                     tGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcg                                                                                                  <  2:25951‑M1/136‑38 (MQ=255)
                                     tGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcg                                                                                                  <  1:1434044‑M1/136‑38 (MQ=255)
                                          tCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtattacacacatgaggtgttaataatatatgtaatatttgtt                                                                                             >  1:1468991‑M1/1‑94 (MQ=255)
                                            tgtgGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatcttta                                                                                           >  2:2374108‑M1/1‑92 (MQ=255)
                                            tgtgGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaa                                                                                           >  2:337623‑M1/1‑92 (MQ=255)
                                            tgtgGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaa                                                                                           >  1:1184708‑M1/1‑92 (MQ=255)
                                             gtgGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaa                                                                                          <  1:2062439‑M1/136‑46 (MQ=255)
                                             gtgGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggt                                                                                          <  1:249868‑M1/136‑45 (MQ=255)
                                             gtgGTTACTAAATAGCCTCAGGGAAGGCATTCCCTATTTCTATACAATTCCGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatattttacattgttatttggt                                                                                          <  1:498359‑M1/136‑45 (MQ=255)
                                               ggTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGATAGTGGCGTAGTCTTGt                                                                                        >  2:1829735/1‑136 (MQ=255)
                                               ggTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCacttaattgcgcactgcctataataggcgttattccaatcggttatt                                                                                        >  2:2117464‑M1/1‑89 (MQ=255)
                                               ggTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTATATGCATTTACACAAGATATATTACGCACTCtaaaaaacatctagcatacaagcttttacattttttaaattaaaat                                                                                         >  1:1992076‑M1/1‑89 (MQ=255)
                                                 ttACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacg                                                                                      >  2:96878‑M1/1‑87 (MQ=255)
                                                      aaaTATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaataaatactc                                                                                 >  1:443849‑M1/1‑82 (MQ=255)
                                                           tCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcacccta                                                                            >  2:2180509‑M1/1‑77 (MQ=255)
                                                            cATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCacttaattgcgcactgcctataataggcgttattccaatcggttatttcattggaatcac                                                                           <  1:1038012‑M1/136‑61 (MQ=255)
                                                             aTAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTatcatc                                                                                                                 >  1:233863/1‑97 (MQ=255)
                                                               aaGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCacttaattgcgcactgcctataataggcgttattccaatcggttatttcattggaatcacgag                                                                        <  2:681927‑M1/136‑64 (MQ=255)
                                                                 gggAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaa                                                                      >  2:423137‑M1/1‑71 (MQ=255)
                                                                   gAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaat                                                                     <  1:1108776‑M1/135‑67 (MQ=255)
                                                                    aaGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGATAGTGGCGTAGTCTTGTAGATAAATCCAAGCGACTaaa                                                                   >  1:1300245/1‑136 (MQ=255)
                                                                    aaGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcgggactgtacttagtcaggacattagttggat                                                                   >  2:2324113‑M1/1‑68 (MQ=255)
                                                                     aGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcgggactgtacttagtcaggaaattagttggat                                                                   <  1:797135‑M1/135‑69 (MQ=255)
                                                                     aGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacg                                                                   <  2:228195‑M1/135‑69 (MQ=255)
                                                                       gCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtattacacacatgaggtgttaataatatatgtaatatttgttattattattaattatgctattttatttt                                                                 >  1:266368‑M1/1‑65 (MQ=255)
                                                                        cATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtattacacacatgaggtgttaataatatatgtaatatttgttattattattaattatgctattttatttt                                                                 <  1:718716‑M1/134‑71 (MQ=255)
                                                                         aTTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacggctaa                                                              >  1:844043‑M1/1‑63 (MQ=255)
                                                                         aTTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacggctaa                                                              >  1:2454083‑M1/1‑63 (MQ=255)
                                                                         aTTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacggctaa                                                              >  1:17380‑M1/1‑63 (MQ=255)
                                                                         aTTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccag                                                              >  1:762179‑M1/1‑63 (MQ=255)
                                                                          ttCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagccc                                                             <  1:2251446‑M1/136‑74 (MQ=255)
                                                                              cTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagcccaatt                                                         >  2:627105‑M1/1‑59 (MQ=255)
                                                                               tATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGATAGTGGCGTAGTCTTGTAGATAAATCCAAGCGACTAAATCATACTTATc                                                        >  1:587845/1‑136 (MQ=255)
                                                                               tATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagcccaatta                                                        <  1:314603‑M1/136‑79 (MQ=255)
                                                                                aTTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCacttaattgcgcactgcctataataggcgttattccaatcggttatttcattggaatcacgagttaggggggagcgtcat                                                       <  1:1529781‑M1/136‑81 (MQ=255)
                                                                                     tataCAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagcccaattaacgct                                                   >  1:394679‑M1/1‑52 (MQ=255)
                                                                                          aaTTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGa                                                                                                         <  1:2025747/76‑1 (MQ=255)
                                                                                          aaTTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgatgtggactagtcgtcaaactgtcgggggttcgggactgtacttagtcaggaacttagttggattttctccgttaaggttggtgaa                                             >  2:777203‑M1/1‑46 (MQ=255)
                                                                                          aaTTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtattacacacatgaggtgttaataatatatgtaatatttgttattattattaattatgctattttatttttctatagacggtactgtcat                                             >  1:1772743‑M1/1‑46 (MQ=255)
                                                                                          aaTTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgccttttta                                             >  1:1611754‑M1/1‑46 (MQ=255)
                                                                                          aaTTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaataaatactcaaacgtaaccgttaattaatggaggtgtatgcgaca                                             >  2:122872‑M1/1‑46 (MQ=255)
                                                                                          aaTTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCaacttttatatctaatgatatatgttaaaagaatcgttaataaaataaatactcaaacgtaacctttaattaatgtaggtgtatgcgaca                                             >  2:1625930‑M1/1‑46 (MQ=255)
                                                                                          aaTTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagcccaattaacgctgcactc                                             <  2:1674372‑M1/136‑90 (MQ=255)
                                                                                              cagAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacggctaatttcttattaatacgttgaaa                                         <  1:1570930‑M1/135‑95 (MQ=255)
                                                                                               aGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGATAGTGGCGTAGTCTTGTAGATAAATCCAAGCGACTAAATCATACTTATCATGAAAATGAtagtag                                        >  2:47932/1‑136 (MQ=255)
                                                                                               aGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaataaatactcaaacgtaaccgttaattaatggaggtgtatgcgacatgaaa                                        >  2:2006658‑M1/1‑41 (MQ=255)
                                                                                               aGAAAACTTTTATGCATTTACACAAGATATTTTACGCTCTCAgggaggcagttgtggctaataaatatttttcattgttatttgtagcccagttctaccgtcgagaatttagcccaattaacgctgcactcaact                                         >  2:571930‑M1/1‑42 (MQ=255)
                                                                                                  aaTCTTTTATGCATTTACACAAGATATTTTACGCTCTCtattacacacatgaggtgttaataatatatgtaatatttgttattattattaattatgctattttatttttctatagacggtactgtcataaaat                                        <  1:1869004‑M1/133‑96 (MQ=255)
                                                                                                  aaTCTTTTATGCATTTACACAAGATATTTTACGCTCTCacttaattgcgcactgcctataataggcgttattccaatcggttatttcattggaatcacgagttaggggggagcgtcatgcggatacgtcgacc                                        <  2:223246‑M1/133‑96 (MQ=255)
                                                                                                  aaTCTTTTATGCATTTACACAAGATATTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaataaatactcaaacgtaaccgttaattaatggaggtgtatgcgacatgaaaaat                                     >  1:1701961‑M1/1‑38 (MQ=255)
                                                                                                  aaTCTTTTATGCATTTACACAAGATATTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaataaatactcaaacgtaaccgttaattaatggaggtgtatgcgacatgaaaa                                       <  1:877436‑M1/134‑97 (MQ=255)
                                                                                                  aaTCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagcccaattaacgctgcactcaactacg                                      <  2:1734760‑M1/135‑97 (MQ=255)
                                                                                                   aTCTTTTATGCATTTACACAAGATATTTTACGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcgggactgtacttagtcaggaaattagttggattttctccgttaaggttggtgaattgttaaat                                    <  2:1037021‑M1/136‑100 (MQ=255)
                                                                                                    tcatttatgCATTTACACAATATATTTTACGCTCTAtattacacacattaggtgttaataaaatatgtaatattttttattattattaattatgctattttatttttctatagactgtactggcataaaatagtga                                   >  2:1875555‑M1/4‑36 (MQ=255)
                                                                                                    tCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgctta                                   <  1:1665348‑M1/136‑101 (MQ=255)
                                                                                                    tCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgctta                                   <  2:851821‑M1/136‑101 (MQ=255)
                                                                                                    tCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgctta                                   <  1:100552‑M1/136‑101 (MQ=255)
                                                                                                    tCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgctta                                   <  2:1400511‑M1/136‑101 (MQ=255)
                                                                                                    tCTTTTATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagcattttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgctta                                   <  2:1981092‑M1/136‑101 (MQ=255)
                                                                                                    tCTTTTATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagcccaattaacgctgcactcaactacggat                                   <  2:1180253‑M1/136‑100 (MQ=255)
                                                                                                    tCTTTTATGCATTTACACAAGATAATTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgctta                                   <  2:1935273‑M1/136‑101 (MQ=255)
                                                                                                      ttttATGCATTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgcttaat                                 <  2:1358936‑M1/136‑103 (MQ=255)
                                                                                                       tttATGCATTTACACAAGATATTTTACGCTCTCCgggaggcagttgtggctaataaatatttttcattgttatttggtgcccagttctaccgtcgagattttagcccaattaacgctgcactcaactacggatacg                                <  1:681987‑M1/136‑103 (MQ=255)
                                                                                                        ttatgcatTTACACAAGATATTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaataaatactcaaacgtaaccgttaattaatggaggtgtatgcgacatgaaaaataaggat                               <  2:1457591‑M1/133‑105 (MQ=255)
                                                                                                         tatgcaTTTACACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgcttaatcaa                              <  2:905943‑M1/134‑106 (MQ=255)
                                                                                                          atgcATTTACACAAGATATATTACGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcgggactgtacttagtcaggaaattagttggattttctccgttaaggttggtgaattgttaaataaaaaca                             <  1:1339947‑M1/135‑107 (MQ=255)
                                                                                                           tgCATTTACACAAGATATTTTACGCTCTCacttaattgcgcactgcctataataggcgttattccaatcggttatttcattggaatcacgagttaggggggagcgtcatgcggatacgtcgaccggttcggtttta                            >  2:1269678‑M1/1‑29 (MQ=255)
                                                                                                              atttaCACAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacggctaatttcttattaatacgttgaaagacccgtggtgtata                          <  1:928121‑M1/134‑110 (MQ=255)
                                                                                                              atttaCACAAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgcttaatcaactgat                         <  2:724110‑M1/135‑111 (MQ=255)
                                                                                                                  acacAAGATATTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacggctaatttcttattaatacgttgaaagacccgtggtgtatagcaaa                     <  2:1517517‑M1/136‑115 (MQ=255)
                                                                                                                   cacaAGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgcttaatcaactgatac                       >  1:1383398‑M1/1‑21 (MQ=255)
                                                                                                                      aaGATATTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgcttaatcaactgatacactgcc                 <  1:960312‑M1/136‑119 (MQ=255)
                                                                                                                          tatTTTACGCTCTCtaaaaaacatctagcattcaagctttttcattttttaaattaaaatacgtgtcaccctattttaataaaccagtttgatccgcctttttaaccacgcttaatcaactgatacactgcccc               <  1:624219‑M1/134‑121 (MQ=255)
                                                                                                                          tatTTTACGCTCTCaacttttctatctaatgatatatgttaaaagaatcgttaataaaataaatactcaaacgtaaccgttaattaatggaggtgtatgcgacatgaaaaataaggataaacagtatgaaaaagt              <  1:2286156‑M1/135‑122 (MQ=255)
                                                                                                                           atTTTACGCTCTCtgatttcatctggttgtatcagaatatgattgactaaatctttaatttcaacttcgcttaaattaacggctaatttcttattaatacgttgaaagacccgtggtgtatagcaaatatgtgt              >  1:2213153‑M1/1‑13 (MQ=255)
                                                                                                                           atTTTACGCTCTCtattacacacatgaggtgttaataatatatgtaatatttgttattattattaattatgctattttatttttctatagacggtactgtcataaaatagtgagtgttaatcggaagataaaggaa            >  2:1093176‑M1/1‑13 (MQ=255)
                                                                                                                                aCGCTCTCttcgttgtggactagtcgtcaaactgtcgggggttcgggactgtacttagtcaggaaattagttggattttctccgttaaggttggtgaattgttaaataaaaacatgtggtattttggttgggagag       >  2:1310879‑M1/1‑8 (MQ=255)
                                                                                                                                     ctctgatttcatctggttgtatcagaatatgattgactaaaactttaatttcaacttcgcttaaattaacggctaatttcttattaatacgttgaaagacccgtggtgaatagcaaatatgtgttctaattaactc  >  2:369510‑M1/1‑3 (MQ=255)
                                                                                                                                       cttcgttgtggactagtcgtcaaactgtcgggggttcgggactgtacttagtcaggaaattagttggattttctccgttaaggttggtgaattgttaaataaaaac                              <  1:527809‑M1/106‑106 (MQ=255)
                                                                                                                                       |                                                                                                                                     
CTGTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCCACTAAAGGATCGGGTATCATCCGCAACGATAGTGGCGTAGTCTTGTAGATAAATCCAAGCGACTAAATCATACTTATCATGAAAATGATAGTAGAAAGCTTGTGGGGTTGCTCCTGCAGCTTTAGCTAAATG  >  TrimmedAssembly_T66_contig_1/88478‑88746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.