| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_17 | = 66737 | 4 (0.020) | 886 (1.620) +A |
100/260 | 0.0 | 99.8% | intergenic (+451/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_32 | 1 = | 0 (0.000) | intergenic (–/‑42) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 925 total aligned reads displayed.
TATGTAATAGTTGTGTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_17/66602‑66738 | gatgattaAGTTGTGTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTTTAGTGTCTCTAGATTTTGAATCAAGAGCAAAACATTTTCGAAGTCAATTCTCTAGc < 1:1277689‑M1/128‑1 (MQ=255)gatgattaAGTTGTGTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGc < 1:1054485‑M1/128‑1 (MQ=255) atgattaagctgtgttaagcgattaacacacGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAgca > 2:1659417‑M2/32‑135 (MQ=255) tgattaAGTTGTGTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTagcaa > 2:465690‑M1/7‑134 (MQ=255) gctgtgttAAGCGATTAACACACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaatt > 1:2231746‑M1/3‑127 (MQ=255) gTTGTGTTAATCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTATTGATTTTGAATCCAGAGCAAATCATTTGAGAAGTCAATTCGCTAGCaaataaatt > 2:672088‑M1/1‑127 (MQ=255) gtgtTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaatttta < 2:2203265‑M1/136‑13 (MQ=255) gtgtTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaatttta > 1:791499‑M1/1‑124 (MQ=255) gtgtTAAGCGATTAACACACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaatttta < 2:1271964‑M1/136‑13 (MQ=255) gtTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttag < 2:1010822‑M1/135‑14 (MQ=255) gtTAAGCGATTAACACACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttag < 1:294615‑M1/135‑14 (MQ=255) ttAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagt > 1:201825‑M1/1‑121 (MQ=255) ttAACACACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacatta > 1:1698980‑M1/1‑113 (MQ=255) acacacgGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaactaaattttagtacaacattaaat > 1:1100306‑M1/4‑110 (MQ=255) acacacgGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaat > 2:355940‑M1/4‑110 (MQ=255) acacacgGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaat > 2:1829386‑M1/4‑110 (MQ=255) acacacgGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaat < 2:409490‑M1/133‑27 (MQ=255) acacacgGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaat > 1:1322232‑M1/4‑110 (MQ=255) acacacgGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGAGAATTCAATTCGCTAGCaaataaattttagtacaacattaaat > 2:585344‑M1/4‑110 (MQ=255) acacacgGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAAAATTTGCGAATTCAATTCGATAGAaaataaattttagaacaacattaaat > 1:1953366‑M1/4‑110 (MQ=255) aCGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaat > 2:2393812‑M1/1‑110 (MQ=255) aCGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaat < 1:52058‑M1/136‑27 (MQ=255) aCGCACTGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaat < 2:805740‑M1/136‑27 (MQ=255) acgatttagaccTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagct < 2:969617‑M1/131‑32 (MQ=255) acgatttagaccTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagct < 1:694755‑M1/131‑32 (MQ=255) acgatttagaccTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagct > 1:837062‑M1/6‑105 (MQ=255) acgatttagaccTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagct < 1:870696‑M1/131‑32 (MQ=255) gatttagaCCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagcttt > 2:1116717‑M1/4‑103 (MQ=255) aaTTAGATCTTTGAAAACTGGACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGATTCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgtgctttt > 2:930407‑M1/1‑102 (MQ=255) aaTTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttt > 2:2028403‑M1/1‑102 (MQ=255) ttGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcat < 1:95345‑M1/136‑45 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcat > 2:1446584‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcat > 2:1165337‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcat > 2:1994029‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcat > 1:381915‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcagcat > 2:1236500‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttag < 2:1954204‑M1/102‑14 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgtgctttttagaactcatcat > 2:892487‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcat > 1:738591‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcat > 2:2162026‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcat > 2:15770‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttataactcatcct > 1:413501‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcat > 1:1396058‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcat > 1:2536053‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcat > 1:1545353‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCGAGCgactaaattttagtacaacattaaatgagctttttagaactcatcat > 2:2270875‑M1/1‑89 (MQ=255) aaaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGAATTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcat > 1:2344886‑M1/1‑89 (MQ=255) aaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcatt > 2:2530935‑M1/1‑88 (MQ=255) aaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcatt > 1:1615005‑M1/1‑88 (MQ=255) aaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcatt > 2:1885044‑M1/1‑88 (MQ=255) aaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcatt > 2:7035‑M1/1‑88 (MQ=255) aaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcatt > 1:136197‑M1/1‑88 (MQ=255) aaaCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcatt > 1:1504930‑M1/1‑88 (MQ=255) aCTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaa < 2:2231746‑M1/136‑51 (MQ=255) tGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcattaatt < 1:603369‑M1/136‑53 (MQ=255) tGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcattaatt < 2:291503‑M1/136‑53 (MQ=255) ttCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttg < 2:1702497‑M1/136‑63 (MQ=255) ttCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttg < 1:1571507‑M1/136‑63 (MQ=255) tCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcattaatttgagagtttga < 2:1355482‑M1/136‑64 (MQ=255) cgaATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgat > 1:1220211‑M1/1‑69 (MQ=255) cgaATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcagtaatttgagagtttgat > 2:1776119‑M1/1‑69 (MQ=255) gaATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctg < 1:1732636‑M1/136‑69 (MQ=255) aTCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctgg < 1:2060414‑M1/135‑70 (MQ=255) ggTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaac > 1:1152451‑M1/1‑53 (MQ=255) ggTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaac > 2:541461‑M1/1‑53 (MQ=255) ggTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaat > 2:1541958‑M1/1‑53 (MQ=255) tctTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggc < 1:238708‑M1/136‑88 (MQ=255) tctTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggc < 1:1446584‑M1/136‑88 (MQ=255) tctTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggc < 1:1003126‑M1/136‑88 (MQ=255) tctTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggc < 1:660452‑M1/136‑88 (MQ=255) tctTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggc < 1:1830386‑M1/136‑88 (MQ=255) tctTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggc < 1:906861‑M1/136‑88 (MQ=255) tGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggc > 1:1181225‑M1/1‑46 (MQ=255) gATTTTTAATCAAGAGCAAAACAATTGCGAAGTCAATTCGCTAGCaaataaatttaagtacaacattaaatgagctttttagaactcatcattaattttagagtttgatcctggctcaggacgaacgctggcggcg > 2:2309239‑M1/1‑45 (MQ=255) gATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcg > 2:1626759‑M1/1‑45 (MQ=255) gATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcg > 1:1907208‑M1/1‑45 (MQ=255) gATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcg > 2:1387964‑M1/1‑45 (MQ=255) gATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcg > 1:2511222‑M1/1‑45 (MQ=255) gATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcg > 1:2203730‑M1/1‑45 (MQ=255) ttttGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaat < 1:575840‑M1/69‑27 (MQ=255) gAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaattaaattttagtacaacattaaatgagctttttagaactcatctttaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgccta > 2:1499316‑M1/1‑39 (MQ=255) aaTCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaa > 1:1997842‑M1/1‑38 (MQ=255) aTCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaat > 1:473687‑M1/1‑37 (MQ=255) aaaaCATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgca < 1:1802717‑M1/134‑107 (MQ=255) cATTTGCGAAGTCAATTCGCTAGCgaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcga < 2:622695‑M1/136‑113 (MQ=255) cATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcga < 2:1062903‑M1/136‑113 (MQ=255) cATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcga < 2:2420760‑M1/136‑113 (MQ=255) cATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcga < 1:2279185‑M1/136‑113 (MQ=255) cATTTGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcga < 1:2103126‑M1/136‑113 (MQ=255) cATGTGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcga < 2:2080867‑M1/136‑113 (MQ=255) tttGCGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaac < 2:2377010‑M1/136‑115 (MQ=255) tGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggtcgaacgctggcggcgtgcctaatacatgcaagtcgaacga < 2:1851918‑M1/136‑117 (MQ=255) tGCGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacga < 1:326977‑M1/136‑117 (MQ=255) cGAAGTCAATTCGCTAGCaaataaattttagtacaatattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacga > 1:2157899‑M1/1‑18 (MQ=255) cGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacga > 2:516017‑M1/1‑18 (MQ=255) cGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacga > 1:625557‑M1/1‑18 (MQ=255) cGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacga > 1:1768770‑M1/1‑18 (MQ=255) cGAAGTCAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcg > 1:243842‑M1/1‑18 (MQ=255) cAATTCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgaactctg < 1:2123119‑M1/134‑123 (MQ=255) ttCGCTAGCaaataaattttagtacaacattaaatgagctttttagaactcatcattaatttgagagtttgatcctggctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgaacgaactctggtatt < 2:2458736‑M1/136‑128 (MQ=255) | TATGTAATAGTTGTGTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_17/66602‑66738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |