| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_19 | 1 = | 0 (0.000) | 279 (0.890) | 72/262 | 0.2 | 100% | intergenic (–/+149) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_35 | = 1096 | 0 (0.000) | intergenic (+10/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Mobile element protein/– | |||||
Only 100 of 279 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACGAGTAAATT > TrimmedAssembly_T66_contig_19/1‑134 | gataattatacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTc > 1:2458562‑M1/134‑136 (MQ=255) attatacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaa > 2:1669752‑M1/130‑136 (MQ=255) attatacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaa > 2:1837586‑M1/130‑136 (MQ=255) tatacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaaaa < 2:1200433‑M1/9‑1 (MQ=255) atacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaaaaa > 2:840381‑M1/127‑136 (MQ=255) tacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaaaaa < 2:1819946‑M1/10‑1 (MQ=255) tacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaaaaa < 1:378902‑M1/10‑1 (MQ=255) tacagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaaaaa < 2:151583‑M1/10‑1 (MQ=255) acagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGc > 2:421393‑M1/125‑136 (MQ=255) acagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGc > 1:2033113‑M1/125‑136 (MQ=255) acagaacaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGc > 1:1698793‑M1/125‑136 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGcc > 1:1848551‑M1/120‑132 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCg > 1:170461‑M1/120‑133 (MQ=255) acaggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCg > 1:108746‑M1/120‑133 (MQ=255) aggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATg < 2:1943725‑M1/19‑1 (MQ=255) aggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATg < 1:488926‑M1/19‑1 (MQ=255) aggacgttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATg < 2:1906796‑M1/19‑1 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTa > 1:224087‑M1/113‑117 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAATAGCCGTCATGGGTAt < 1:1143717‑M1/24‑1 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 1:163144‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt < 1:841387‑M1/24‑1 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 2:801174‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 1:2364278‑M1/113‑136 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt < 2:112523‑M1/24‑1 (MQ=255) gttgaacactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 2:930960‑M1/113‑136 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaa < 2:2512557‑M1/7‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTaaa > 1:2512557‑M1/108‑114 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAATAAAGCCGTCATGGGTATGCaa < 1:2006012‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 2:1271857‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 2:1424778‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 1:1889656‑M1/28‑1 (MQ=255) acactgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCaa < 2:198189‑M1/28‑1 (MQ=255) tgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATcccc > 2:457926‑M1/104‑136 (MQ=255) tgccaaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATcccc > 1:1943725‑M1/104‑136 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcaca < 1:2503007‑M1/36‑1 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcaca < 2:2379657‑M1/36‑1 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcaca < 1:767963‑M1/36‑1 (MQ=255) caaaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCcaca < 1:62329‑M1/36‑1 (MQ=255) aaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc < 2:1065833‑M1/38‑1 (MQ=255) aaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc > 1:2520020‑M1/99‑136 (MQ=255) aaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc < 2:647112‑M1/38‑1 (MQ=255) aaagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc > 1:574908‑M1/99‑136 (MQ=255) aagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACg > 2:350534‑M1/98‑136 (MQ=255) aagcagttaaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACg > 1:1730905‑M1/98‑136 (MQ=255) taaatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTg > 1:432337‑M1/91‑134 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAAc > 1:2453237‑M1/89‑126 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtat < 2:2470806‑M1/48‑1 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtat < 1:1455238‑M1/48‑1 (MQ=255) aatcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtat < 1:776729‑M1/48‑1 (MQ=255) atcaacgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtatt > 1:745264‑M1/88‑136 (MQ=255) aacaacgtcctcgcaaagggatacactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTCAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCtatt > 1:2109742‑M1/88‑136 (MQ=255) cgtcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCtt > 2:2237390‑M1/83‑136 (MQ=255) tcctcgcaaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgatgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGt < 2:483959‑M1/56‑1 (MQ=255) aaagtgttaaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGcc < 1:977459‑M1/63‑1 (MQ=255) taaactatgaaaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACa > 1:1341597‑M1/67‑135 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGTGTATGCAATCACCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 2:43422‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt < 1:546750‑M1/24‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTAt > 2:546750‑M1/57‑80 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 2:2270109‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 2:706467‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 1:648902‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 2:583409‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 1:354209‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTcaac < 2:1105001‑M1/80‑1 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATACACACAACGGCCTGCAATTATATTGTAATAGCCAAAACAAGAGGTtcaaa < 1:2351976‑M1/80‑2 (MQ=255) aaccccatatgaagtattttttgacaaaccgttgaacttagtttgtaaattcgccaGTCTAAAAAAGCCGACATGGTTATGCAATCCCCACAACGGCCTTCTATAATCGTGTAATAGCAAAAACAAGCGGATcaac < 2:2014865‑M1/80‑1 (MQ=255) cccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCaacaac > 2:1591058‑M1/54‑136 (MQ=255) cccatatgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCaacaac > 2:767963‑M1/54‑136 (MQ=255) atgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTg < 2:1173821‑M1/85‑1 (MQ=255) atgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTg < 2:1758952‑M1/85‑1 (MQ=255) atgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCt > 1:1034177‑M1/49‑136 (MQ=255) tgaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTg > 1:1243726‑M1/48‑136 (MQ=255) gaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGt < 2:1628930‑M1/90‑1 (MQ=255) gaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGt < 2:300222‑M1/90‑1 (MQ=255) gaagtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGt < 1:522548‑M1/90‑1 (MQ=255) agtattttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGttt > 1:472424‑M1/45‑136 (MQ=255) attttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGttt > 2:506345‑M1/42‑133 (MQ=255) attttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTc > 1:180395‑M1/42‑134 (MQ=255) attttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTc > 2:2177812‑M1/42‑134 (MQ=255) ttttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGAt < 1:1571956‑M1/96‑1 (MQ=255) tttttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGAtt < 1:1005173‑M1/97‑1 (MQ=255) ttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGa > 2:1624199‑M1/37‑136 (MQ=255) ttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGa > 1:1300354‑M1/37‑136 (MQ=255) ttgacaaaccgttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGa > 1:1977515‑M1/37‑136 (MQ=255) gttgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGt > 2:1351755‑M1/27‑136 (MQ=255) tgcacttagtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTAc > 2:2046088‑M1/25‑136 (MQ=255) agtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCt > 1:1200433‑M1/18‑136 (MQ=255) agtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCt > 2:1064432‑M1/18‑136 (MQ=255) agtttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCt > 1:96909‑M1/18‑136 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGTCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCAGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 2:1606568‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTg < 1:2045130‑M1/55‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 2:170136‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc > 1:151583‑M1/15‑135 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 1:22882‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc > 2:1449854‑M1/15‑135 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 1:32254‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 2:2005181‑M1/121‑1 (MQ=255) ttgacaattcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCAATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTAc < 2:1238451‑M1/121‑1 (MQ=255) attcgcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACGAg < 1:201669‑M1/128‑1 (MQ=255) gcccGTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACGAGTaaa < 1:1447280‑M1/132‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTAAAAAAGCCGTCATGGGTATGCAATCCCCACAACGGCCTGCTATTATCTTGTAATAGCCAAAACAAGCGGTTCAACAACTGCCTGTTTCGATTAGATCCAACTGGTACCCAATCTACTCACGAGTAAATT > TrimmedAssembly_T66_contig_19/1‑134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |