| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_2 | 2 = | 1 (0.000) | 449 (0.920) +CCTTTGATTTTTAAAGTTGGTCCCTACCGTGACCAG |
79/190 | 0.0 | 99.9% | coding (1/180 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_42 | 1 = | 0 (0.000) | coding (318/318 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Transposase, IS4 family | |||||
Only 100 of 522 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTAT > TrimmedAssembly_T66_contig_2/1‑133 | tgaaggcttctttacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggc > 2:2413896‑M1/135‑135 (MQ=255) agatgaaggcttctttacatttcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGt > 1:59005‑M1/134‑136 (MQ=255) gaaggcttctttacatttcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGc < 1:1032840‑M1/7‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATggg < 2:2100864‑M1/14‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATggg < 2:1822705‑M1/14‑1 (MQ=255) tacatttcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaaatttaaaaatcaaaggCGTAAGCAAATggg < 2:2272254‑M1/14‑1 (MQ=255) ttttcaatcgattctcggtgcgatgtttcgacaaggtcaccaaggaagccggaatagtaatactggcgttaaactttatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACg > 1:2160406‑M1/120‑136 (MQ=255) tacatttcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACga < 1:1698680‑M1/18‑1 (MQ=255) tcaatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACgaga < 2:1202868‑M1/20‑1 (MQ=255) catttcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACgaga > 2:1048679‑M1/117‑136 (MQ=255) aatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttcaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGaa < 2:2489674‑M1/21‑1 (MQ=255) aatcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGaa < 2:175415‑M1/21‑1 (MQ=255) tcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACg > 1:1089586‑M1/113‑129 (MQ=255) tcgattctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAAcc < 2:258840‑M1/24‑1 (MQ=255) attctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCaaa < 2:1288072‑M1/27‑1 (MQ=255) ctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAAt < 1:748896‑M1/29‑1 (MQ=255) ctcggtgcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAAt < 2:1625342‑M1/29‑1 (MQ=255) gcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGttt > 2:2250704‑M1/101‑136 (MQ=255) gcgaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGtt > 1:913986‑M1/101‑135 (MQ=255) gaggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaacattaaaaatcaaaggCGTAAGCAAATGGGACGTGAAACCAAAATTCGGTTtc > 1:1476914‑M1/99‑135 (MQ=255) ggtttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacgggagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCg < 2:1110477‑M1/40‑1 (MQ=255) ttcgacaaggtcaccacggaagccggaatcgtaatactgtcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatccaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:265597‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaccattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAAGTCGGTTTCTCGTc > 2:2433079‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAACATTCGGTTTCTCGTc > 2:370969‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTc > 1:1230790‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAAGTCGGTTTCTCGTc > 1:12855‑M1/94‑135 (MQ=255) ttcgacaaggtcaccaagcaagccggaatcgtaatacaggcgttacacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAACTGGGCCGAGAAACCACACTTCGGTTTCTCGTc > 2:2213777‑M1/94‑135 (MQ=255) tcgacaatgtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggacaaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 2:1736265‑M1/93‑136 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 1:2389456‑M1/93‑136 (MQ=255) tcgacaaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTccc > 1:415515‑M1/93‑136 (MQ=255) caaggtcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAttt < 2:1018066‑M1/48‑1 (MQ=255) aaatgtaaccaaggtagccggaatcgtactactggcgttaaacattatgaaactggtcactgtagggaccaactttaaaaatcaaaggCTTAAGCAAATGGGACGAGAAACCAAACTTCGGTTTCTCGTCCCAtt > 2:920487‑M1/89‑135 (MQ=255) tcaccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTta < 2:1868291‑M1/53‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaacggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:2345091‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaacggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:1424194‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:443736‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:572835‑M1/54‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:62567‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:530985‑M1/83‑136 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:353578‑M1/54‑1 (MQ=255) caccaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:2312198‑M1/83‑136 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:1767713‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 2:2382255‑M1/54‑1 (MQ=255) accaaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 2:1916490‑M1/82‑135 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcactgtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 2:1397430‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 1:1529920‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 1:1363201‑M1/79‑136 (MQ=255) aaggaagccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag > 1:1834374‑M1/79‑136 (MQ=255) agccggaatcgtaatactggcgttatacattatgaaactggtctcggtagggaccaactttaaaattcataggCGTTAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCt > 2:1193288‑M1/74‑136 (MQ=255) agccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCt > 1:1158173‑M1/74‑136 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 2:968355‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAg < 1:1196904‑M1/65‑1 (MQ=255) ccggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCCTTTGCTTATACAGAGGCTAg < 2:2064717‑M1/65‑1 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 1:1746469‑M1/71‑134 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGt < 2:1501280‑M1/66‑1 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGt < 2:1310098‑M1/66‑1 (MQ=255) cggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaacattaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 1:1940557‑M1/71‑134 (MQ=255) ggaatcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGtt < 1:687558‑M1/67‑1 (MQ=255) gactcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaataatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTa < 1:2261057‑M1/68‑1 (MQ=255) gaatcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTa < 1:533927‑M1/68‑1 (MQ=255) atcgtaatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 2:22931‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat > 1:2210321‑M1/67‑120 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg > 2:1578994‑M1/67‑136 (MQ=255) atcgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGATTATACAGAGGCTAGTTATg > 2:2164429‑M1/67‑136 (MQ=255) cgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc > 2:1238485‑M1/65‑136 (MQ=255) cgtaatactggcgttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc > 1:1625342‑M1/65‑136 (MQ=255) aatactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcac > 1:1596565‑M1/62‑135 (MQ=255) tactggcgttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCAGTTGCTTATACAGAGGCTAGTTATGTCACAg < 2:780573‑M1/76‑1 (MQ=255) gttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCtcttcg < 1:1313403‑M1/84‑3 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcctttt < 1:2297459‑M1/85‑6 (MQ=255) ttaaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATGTGCTTATACAGAGGCTAGTTATGTCacagcctcgtctt < 2:1688505‑M1/85‑6 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcacagcctgttcgt < 2:1028741‑M1/85‑7 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCacagcctcatttt < 2:652604‑M1/85‑6 (MQ=255) ttaaacattatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCctcttcgt < 1:1572950‑M1/85‑4 (MQ=255) taaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcacagcctcgtctta > 2:21516‑M1/51‑130 (MQ=255) taaacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTGTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTcacagcctcgtctta < 1:2044822‑M1/86‑7 (MQ=255) aacattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCcttttttg > 2:2325614‑M1/49‑135 (MQ=255) cattatgaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAAATCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCtccttttttgaa < 1:946109‑M1/90‑4 (MQ=255) attatgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCtcattttttatg < 1:1877430‑M1/90‑4 (MQ=255) tgaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCATTTTttatggccgt < 2:1426133‑M1/95‑5 (MQ=255) gaaattggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTa > 2:1995894‑M1/41‑104 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag < 2:752038‑M1/58‑1 (MQ=255) gaaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCATTTtttatggccgtg < 2:48831‑M1/96‑6 (MQ=255) aaactggtcacggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACag < 1:458541‑M1/58‑1 (MQ=255) acggtagggaccaactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCtt > 2:329613‑M1/31‑82 (MQ=255) agggaccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTtatttatatt > 1:764434‑M1/26‑135 (MQ=255) agggaccaacattaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACCGAGGCTAGTTATTTCACAGCATCTTATTTTTTGGATCTTCATTtatttatatt > 1:1379095‑M1/26‑135 (MQ=255) ccaactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:505497‑M1/54‑1 (MQ=255) caactttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATAc < 1:388829‑M1/56‑1 (MQ=255) aactttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAg > 1:85102‑M1/19‑136 (MQ=255) ctttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa > 1:2483144‑M1/17‑136 (MQ=255) tttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTtat < 1:559625‑M1/54‑1 (MQ=255) tttaaaaatcaaaggCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATg < 2:295266‑M1/70‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTc < 2:1537502‑M1/72‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 1:2101004‑M1/120‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 1:311074‑M1/120‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATGTATTTATATTTATCAAAGTa < 1:1004173‑M1/120‑1 (MQ=255) tttaaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAAGTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTGTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTa < 2:1963229‑M1/120‑1 (MQ=255) taaaaatcaaagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATGTTTTGGATCATCATTTATTTATATTTATCAAAGTAACg < 1:2063792‑M1/123‑1 (MQ=255) aagaCGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTAt < 1:1971659/133‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTAAGCAAATGGGACGAGAAACCAAAATTCGGTTTCTCGTCCCATTTGCTTATACAGAGGCTAGTTATGTCACAGCCTCTTATTTTTTGGATCATCATTTATTTATATTTATCAAAGTAACGGTCTGTTAT > TrimmedAssembly_T66_contig_2/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |