New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? TrimmedAssembly_T66_contig_20 16208 =70 (0.430)66 (0.490) 28/216 2.2 48.4% intergenic (‑66/‑80) rasttk_feature_annotation_tool=elepa@bvbrc/rasttk_feature_annotation_tool=elepa@bvbrc hypothetical protein/hypothetical protein
?TrimmedAssembly_T66_contig_20 16359 = 83 (0.620)coding (72/117 nt) rasttk_feature_annotation_tool=elepa@bvbrc hypothetical protein

Only 100 of 214 total aligned reads displayed.

CGACGTAAGTCGTTTTAAGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTCGCACTATTTTTT  >  TrimmedAssembly_T66_contig_20/16074‑16343
                                                                                                                                      |                                                                                                                                       
ggatagacggctatttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgat                                                                                                                                         <  2:2388424‑M1/1‑1 (MQ=255)
ggatagacggctatttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgat                                                                                                                                         <  1:1446369‑M1/1‑1 (MQ=255)
cGACGTAAGTCGTTTTAAGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCT                                                                                                                                         >  1:1811540‑M1/1‑135 (MQ=255)
         gctatttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGAtt                                                                                                                               <  2:1424250‑M1/11‑1 (MQ=255)
         gctatttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGAtt                                                                                                                               <  2:887734‑M1/11‑1 (MQ=255)
         gctatttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGAtt                                                                                                                               <  1:1198968‑M1/11‑1 (MQ=255)
           tatttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGAttt                                                                                                                              >  2:2137231‑M1/124‑135 (MQ=255)
           gTTTTAAGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTT                                                                                                                             >  2:831145‑M1/1‑136 (MQ=255)
           gTTTTAAGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTT                                                                                                                             <  2:2258909‑M1/136‑1 (MQ=255)
           gTTTTAAGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTT                                                                                                                             >  1:447832‑M1/1‑136 (MQ=255)
             tttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTa                                                                                                                           <  2:2252795‑M1/15‑1 (MQ=255)
             tttttgaccagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTa                                                                                                                           <  2:2085530‑M1/15‑1 (MQ=255)
               tAAGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAA                                                                                                                         >  2:2334182‑M1/1‑136 (MQ=255)
                aaGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAA                                                                                                                        >  1:2200445‑M1/1‑136 (MQ=255)
                     cagctaaactgtgaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAata                                                                                                                   >  1:2456062‑M1/114‑136 (MQ=255)
                                gCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattga                                                                                                        >  2:1285774‑M1/1‑125 (MQ=255)
                                 gaccggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGaaa                                                                                                       >  2:602496‑M1/102‑136 (MQ=255)
                                  accggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAAc                                                                                                      <  1:2381333‑M1/36‑1 (MQ=255)
                                  aTGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGaaa                                                                                                       <  1:1030162/135‑1 (MQ=255)
                                  aTGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGaaa                                                                                                       <  2:2375652/135‑1 (MQ=255)
                                  aTGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGaaa                                                                                                       <  1:2531669/135‑1 (MQ=255)
                                  aTGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGaaa                                                                                                       <  2:1352937/135‑1 (MQ=255)
                                    gATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGaaaatt                                                                                                    >  2:800519/1‑133 (MQ=255)
                                    gATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGt                                                                                                    <  2:1823401/136‑1 (MQ=255)
                                     ggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGtt                                                                                                   >  1:1281356‑M1/98‑136 (MQ=255)
                                     ggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGtt                                                                                                   <  1:1815427‑M1/39‑1 (MQ=255)
                                     ggtagtcaaagttatttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtctaaataattgaTTCGCATGATTTTTAAAAAAAAATTGAGagtgaaaaggt                                                                                                   <  1:2407195‑M1/39‑5 (MQ=255)
                                     ggtagtcaaagtaatttgtgtaaattttgtaattatgcaataataatattgttaataaagtgtgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGAGAGTGAAACGtt                                                                                                   <  1:1532735‑M1/39‑1 (MQ=255)
                                          tcaaagttatgtgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACtt                                                                                              <  2:2200445‑M1/44‑1 (MQ=255)
                                          cATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaa                                                                                              >  1:228643‑M1/1‑115 (MQ=255)
                                            taatataatTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTaa                                                                                            >  1:748256/1‑136 (MQ=255)
                                            taatataatTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTaa                                                                                            <  1:1573512/136‑1 (MQ=255)
                                            taatataatTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTaa                                                                                            >  1:132208/1‑136 (MQ=255)
                                                 taattaatTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAg                                                                                       >  2:441523/1‑136 (MQ=255)
                                                   tttgtgtatattttgtaattatgcaataataatcttgttaataaagtttgttaacaaatataactattcgacttaataattgaTTCGCATGTTTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTATTTGAGgt                                                                                     >  1:2346635‑M1/84‑136 (MQ=255)
                                                   tttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGgt                                                                                     >  2:744333‑M1/84‑136 (MQ=255)
                                                    ttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGgtc                                                                                    >  1:298337‑M1/83‑136 (MQ=255)
                                                    ttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGgtc                                                                                    >  2:122115‑M1/83‑136 (MQ=255)
                                                    ttgtgtaaattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGgtc                                                                                    >  1:6631‑M1/83‑136 (MQ=255)
                                                    ttaattTTTTGTTGAATACTAACATCATCCTTCCTGAAATTTTTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCTCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGgtc                                                                                    <  2:2316720/136‑1 (MQ=255)
                                                    ttaattGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGgtc                                                                                    <  2:2489825/136‑1 (MQ=255)
                                                    ttaattGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGgtc                                                                                    <  2:2513866/136‑1 (MQ=255)
                                                     taattGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttt                                                                                   <  1:1892084‑M1/136‑33 (MQ=255)
                                                     taattGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttt                                                                                   <  1:1482289‑M1/136‑33 (MQ=255)
                                                         tGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCaa                                                                               <  1:2224460/136‑1 (MQ=255)
                                                           aattttgtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAgg                                                                             >  2:1859353‑M1/76‑136 (MQ=255)
                                                            ttgttgCATACTAACAGCATCCTTCCTGAAATTTGTACTATTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAgg                                                                             <  1:1558677/135‑1 (MQ=255)
                                                              gttgCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGAt                                                                           >  1:706749/1‑135 (MQ=255)
                                                                 gtaattatgcaataataatattgttaataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACgg                                                                       >  2:422850‑M1/70‑136 (MQ=255)
                                                                    tACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtca                                                                    >  2:1144057‑M1/1‑89 (MQ=255)
                                                                     aCTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcat                                                                   <  2:911834‑M1/136‑49 (MQ=255)
                                                                       tAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattg                                                                 <  2:1193629‑M1/136‑51 (MQ=255)
                                                                        aaCAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGa                                                                >  2:1105557/1‑136 (MQ=255)
                                                                            gCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgc                                                             >  2:2213022‑M1/1‑81 (MQ=255)
                                                                            gCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATAAGGTTATCGAGCg                                                             >  1:734437/1‑135 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcg                                                          >  2:216265‑M1/1‑79 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctc                                                           <  1:1404211‑M1/135‑57 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgct                                                            <  2:145025‑M1/134‑56 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgct                                                            <  2:57301‑M1/134‑56 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgct                                                            <  2:228643‑M1/134‑56 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCg                                                             <  1:2334182/133‑1 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCg                                                             <  1:262931/133‑1 (MQ=255)
                                                                              aTCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAAAAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctc                                                           <  1:1161420‑M1/135‑57 (MQ=255)
                                                                                ccttcctGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAAt                                                        >  2:612063/1‑136 (MQ=255)
                                                                                 cttcctGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCg                                                             <  2:773939/130‑1 (MQ=255)
                                                                                  ttcctGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataa                                                      <  1:1502389‑M1/136‑62 (MQ=255)
                                                                                  ttcctGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATg                                                       >  2:2412743/1‑135 (MQ=255)
                                                                                  ttcctGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTGGACTGATTTGAGGTCGTCAAGGATACGGGGATGGAGCGGCAATg                                                       >  1:804519/1‑135 (MQ=255)
                                                                                      tGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATTgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgt                                                  >  2:456195‑M1/1‑71 (MQ=255)
                                                                                      tGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgt                                                  >  2:288649‑M1/1‑71 (MQ=255)
                                                                                      tGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgt                                                  >  1:2210376‑M1/1‑71 (MQ=255)
                                                                                      tGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATAATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgt                                                  >  2:25843‑M1/1‑71 (MQ=255)
                                                                                       gAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGaa                                                  >  1:1126213/1‑135 (MQ=255)
                                                                                        aaaTTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATc                                                >  1:1981042/1‑136 (MQ=255)
                                                                                          aataaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGt                                              <  1:95326‑M1/92‑1 (MQ=255)
                                                                                            ttGTACTTATTTAATTAACCGTTCAAAACAAGCCATTGTCCCGTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTAt                                            <  2:1068228/136‑1 (MQ=255)
                                                                                             aaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATc                                           <  1:288649‑M1/95‑1 (MQ=255)
                                                                                             aaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATc                                           <  1:486811‑M1/95‑1 (MQ=255)
                                                                                             aaagtttgttaacaaatataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATc                                           <  1:216265‑M1/95‑1 (MQ=255)
                                                                                                aCTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgtatccttgacg                                        <  1:332677‑M1/136‑76 (MQ=255)
                                                                                                aCTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgtatccttgacg                                        >  2:1919597‑M1/1‑61 (MQ=255)
                                                                                                aCTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgtatccttgac                                         <  1:614954‑M1/135‑75 (MQ=255)
                                                                                                    ttttCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgtatccttgacgacct                                    <  1:1013208‑M1/136‑80 (MQ=255)
                                                                                                              ataactattcgtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAAc                          <  1:1826561‑M1/112‑1 (MQ=255)
                                                                                                                        gtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAAt                <  2:1597704‑M1/122‑1 (MQ=255)
                                                                                                                        gtcttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAAt                >  1:1637354‑M1/15‑136 (MQ=255)
                                                                                                                          cttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTc              <  2:1888011‑M1/124‑1 (MQ=255)
                                                                                                                          cttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTc              <  2:1747101‑M1/124‑1 (MQ=255)
                                                                                                                           ttaataattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTc              <  1:2048594‑M1/124‑1 (MQ=255)
                                                                                                                              aTTGTCCCTTCGCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgtatccttgacgacctcaattaagtcaacgtttcactcgcaa          >  2:1631571‑M1/1‑31 (MQ=255)
                                                                                                                              aTTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGAttt                             <  2:542026/117‑1 (MQ=255)
                                                                                                                              aTTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGAttt                             >  1:542026/1‑117 (MQ=255)
                                                                                                                              aTTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTCGc            >  2:348599/1‑134 (MQ=255)
                                                                                                                              aTTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAAATCGc            >  1:1307088/1‑134 (MQ=255)
                                                                                                                                aattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTCGCACTa        <  2:1496725‑M1/130‑1 (MQ=255)
                                                                                                                                aattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTCGCACTa        <  1:831145‑M1/130‑1 (MQ=255)
                                                                                                                                aattgaTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTCGCACTa        <  1:1838762‑M1/130‑1 (MQ=255)
                                                                                                                                   cccTTCTCATGATTTTTAAAAAAATAgtgcgaattgattcctgttaaatcaatatttttgatacgattcgtcattgccgctcgataaccgtatccttgacgacctcaattaa                             <  1:2094755‑M1/112‑87 (MQ=255)
                                                                                                                                   cccTTCGCATGATTTTTAAAAAAATAgtgcgaattgattactgttaaatcaatatttttgatacgattcgacattgccgctcgataaccgtatccttgacgacctcaattaagtcaacgtttcactcgcaatattt     >  2:1532735‑M1/1‑26 (MQ=255)
                                                                                                                                   cccTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTCGCACtattt     <  1:1654074‑M2/136‑6 (MQ=255)
                                                                                                                                      |                                                                                                                                       
CGACGTAAGTCGTTTTAAGTCCCGTTCAAGGTGCATGATATTCATAATATAATTAATTGGTTGTTGCATACTAACAGCATCCTTCCTGAAATTTGTACTTTTTTCATTAACCGTTCAAAACAAGCCATTGTCCCTTCGCATGATTTTTAAAAAAATATTGCGAGTGAAACGTTGACTTAATTGAGGTCGTCAAGGATACGGTTATCGAGCGGCAATGACGAATCGTATCAAAAATATTGATTTAACAGGAATCAATTCGCACTATTTTTT  >  TrimmedAssembly_T66_contig_20/16074‑16343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.