| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_36 | = 864 | 0 (0.000) | 106 (0.230) +AGTTAGATACATATTATATGTACGAAGGCATTTCATTTACACAAGATTCTTGACGCTACC |
36/142 | 0.1 | 100% | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Transposase/– |
| ? | TrimmedAssembly_T66_contig_7 | 1 = | 0 (0.000) | intergenic (–/+104) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/SAM‑dependent methyltransferase | |||||
Only 100 of 1512 total aligned reads displayed.
AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 | aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 2:1911380/136‑1 (MQ=40) gAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTATATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAag < 2:2254426‑M2/136‑3 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 2:179674‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 2:664345‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt > 2:1856032‑M2/1‑132 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:2366362‑M2/136‑5 (MQ=255) cAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtta > 1:1253216‑M2/1‑131 (MQ=255) aaTTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttag > 2:808372‑M2/1‑130 (MQ=255) aaTTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttag > 1:180757‑M2/1‑130 (MQ=255) aTTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttaga > 1:1693813‑M2/1‑129 (MQ=255) ttCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagat < 1:346569‑M2/135‑9 (MQ=255) ttCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagat < 1:2218300‑M2/135‑9 (MQ=255) aCGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatat > 2:1700749‑M2/1‑122 (MQ=255) tCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcat > 1:782367‑M2/1‑105 (MQ=255) gCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcattt > 1:1046328‑M2/1‑103 (MQ=255) ttCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttca > 1:1092945‑M2/1‑101 (MQ=255) tttCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagattcatattatatgtacgaaggcatttcatttaca > 2:1263181‑M2/1‑94 (MQ=255) cAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagat > 1:1365955‑M2/1‑89 (MQ=255) aGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagat < 1:668696‑M2/135‑48 (MQ=255) aGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagat < 1:1429634‑M2/135‑48 (MQ=255) ttAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattct > 2:333622‑M2/1‑85 (MQ=255) tAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttg > 1:232213‑M2/1‑84 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAATGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 1:2404286‑M2/1‑81 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGACGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 1:2476609‑M2/1‑81 (MQ=255) tataACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctac > 2:564130‑M2/1‑77 (MQ=255) aaCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaa < 2:1105374‑M1/136‑63 (MQ=255) aCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccg < 1:804883‑M2/134‑62 (MQ=255) aCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctga > 2:1035390‑M1/1‑73 (MQ=255) aCGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgat < 1:745673‑M2/136‑64 (MQ=255) aGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttag > 1:2438565‑M2/1‑67 (MQ=255) gTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtac > 2:255894‑M1/1‑66 (MQ=255) tGAAGCGGATCCACCGAGTGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcgg > 2:1935359‑M2/1‑61 (MQ=255) tGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcgg > 1:481337‑M2/1‑61 (MQ=255) gAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggt > 1:613025‑M2/1‑60 (MQ=255) aGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcatt < 1:2531589‑M2/136‑79 (MQ=255) aGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctct < 1:390388‑M1/135‑78 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 2:2302511‑M2/1‑55 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaata > 1:1309943‑M2/1‑55 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGAAACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 2:2082973‑M2/1‑55 (MQ=255) ggATCCACAGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaata > 2:1380324‑M2/1‑55 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattca > 2:1645713‑M2/1‑51 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttactcaagattcttgacgctaccgtgtaatactgtacacccatcaggt > 2:245294‑M2/1‑51 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggt > 1:1593970‑M2/1‑51 (MQ=255) ccACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggt > 2:251023‑M2/1‑51 (MQ=255) cACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcattta < 2:1493467‑M2/136‑87 (MQ=255) cACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcag < 2:1286455‑M2/136‑87 (MQ=255) aCCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttat < 1:438342‑M2/136‑88 (MQ=255) cGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaa > 2:2218300‑M2/1‑47 (MQ=255) gTTCAAAGGACTCCAGGACACCTAGGAAGCATCATTTATTTTagttagatacatattatatatacgaaggaatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatat < 2:615051‑M1/135‑94 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatcta < 1:1479217‑M2/136‑97 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccg > 1:1405686‑M1/1‑40 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccg > 1:2183002‑M1/1‑40 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacatt > 1:709927‑M2/1‑40 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgt > 1:1632646‑M2/1‑40 (MQ=255) aaaGGACTCCAGTACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatactaaggcatttcatttacacaatattcttgacgctaccgattgttaataacgtaataatatacaaaatctctgttc > 2:1546417‑M2/1‑38 (MQ=255) aGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtga < 1:99898‑M2/136‑101 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagatta < 1:1856784‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaat > 1:2004585‑M1/1‑28 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagc > 2:2421257‑M1/1‑28 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctcta < 2:845774‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactga < 1:292406‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatc < 2:1443179‑M2/121‑94 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatata < 1:1542354‑M2/112‑85 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg < 2:1359665‑M2/83‑56 (MQ=255) cacCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcg < 1:1759973‑M1/135‑112 (MQ=255) acCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgc > 2:1604844‑M2/1‑23 (MQ=255) cTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagata > 1:1001762‑M2/1‑21 (MQ=255) tGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagg > 1:1214418‑M2/1‑19 (MQ=255) tGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagg > 2:1199819‑M2/1‑19 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagataggg < 2:1758837‑M2/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtg < 2:2023439‑M2/133‑116 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaat < 2:417999‑M2/135‑118 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccga > 1:513093‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtaga > 1:226141‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtaga > 2:2160996‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtaga > 2:388727‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaa > 2:916929‑M1/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaa > 1:114457‑M2/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaa < 2:527184‑M2/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaa < 1:933086‑M2/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaa < 2:1067628‑M2/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaa < 2:2390005‑M2/136‑119 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatataaacgaaggcatttcatttacacaatattcttgacgctacctgaaaacaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtaga > 1:853827‑M1/1‑18 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgg < 1:1943571‑M2/136‑121 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaacgatt > 2:1160135‑M1/1‑16 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtagaact > 2:782425‑M1/1‑16 (MQ=255) catTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccgattacgttt < 1:912341‑M1/136‑127 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagggtggtggcta < 1:1897901‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagggtggtggcta < 1:964307‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgggtatcgcc < 2:233499‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgggtatcgcc < 1:2132130‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgggtatcgcc < 2:219530‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgggtatcgcc < 1:574860‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaattcgctttgct < 1:2064038‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcct < 2:1320252‑M2/131‑124 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaaaaagagccaa < 2:723175‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaaaaagagccaa < 2:477606‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaaaaagagccaa < 2:1963963‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatatacgaaggaatttcatttacacatgattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtagaactaacagtca < 2:947998‑M1/136‑129 (MQ=255) tttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaaaaaagagccaaattg > 1:1175059‑M2/1‑4 (MQ=255) | AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |