| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_33 | 1 = | 0 (0.000) | 71 (0.590) +GAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGA |
25/158 | 0.6 | 73.6% | intergenic (–/‑193) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_9 | = 79 | 85 (0.380) | intergenic (–/+180) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 423 total aligned reads displayed.
‑‑GATAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTG > TrimmedAssembly_T66_contig_9/1‑210 | aggatAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtat < 1:795945‑M2/134‑57 (MQ=255) aTAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttt < 2:2147943‑M2/136‑60 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTa < 2:1500270/135‑1 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTa < 1:527036/135‑1 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgccttttt > 2:2257044‑M2/1‑76 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttt > 2:1858323‑M2/1‑76 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgttttt > 2:1682196‑M2/1‑129 (MQ=255) tAATTTCGTAGAGTATCGGGTGCGACCGATGC‑‑TCTTTTTTTATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCttttttg < 2:2119144/135‑6 (MQ=25) aaTTTCGTAGAGTATCGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCGATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCAAGACCTGCTTTGTTTCTAGAGACGTATGTCACAGCAGCTTCGTAtt > 1:315867/1‑136 (MQ=38) tttCGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaa < 1:1106127‑M2/136‑64 (MQ=255) tCGTAGAGTATCGGGTGCGACCGATGCTTTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTaa < 1:1605500/136‑1 (MQ=255) cGTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGCAAAAATCCGAAGATTTTTCCAGACCTGATTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtc > 1:2104380‑M2/1‑123 (MQ=255) gTAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtg > 2:1216358‑M2/1‑69 (MQ=255) tAGAGTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtcta < 1:349551‑M2/136‑16 (MQ=255) agTATCGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGc > 1:1363887/1‑136 (MQ=255) agTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttag < 2:1004588‑M2/136‑72 (MQ=255) agTATCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctatta < 1:2390886‑M2/136‑19 (MQ=255) aTCGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCAtt > 1:1968417/1‑136 (MQ=255) aTCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatg > 2:220781‑M2/1‑62 (MQ=255) aTCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagtt > 2:1424774‑M2/1‑62 (MQ=255) aTCGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaa > 1:171589‑M2/1‑115 (MQ=255) cGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGTTTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACTACTGCTTTGc > 2:1137840/1‑136 (MQ=255) cGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGc > 1:2463079/1‑136 (MQ=255) cGGGTGCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgt > 2:1249805‑M2/1‑60 (MQ=255) ggTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcc > 1:459334‑M2/1‑59 (MQ=255) ggTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTTCaa > 1:843164/1‑136 (MQ=255) gCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAAtt > 2:2388309/1‑135 (MQ=255) gCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatat < 1:113146‑M2/136‑82 (MQ=255) gCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttata > 1:260088‑M2/1‑55 (MQ=255) gCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagaattatgtcacagcctcttttttataaaaaatatttaaatgtcttg > 2:108308‑M2/1‑55 (MQ=255) gCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccc > 2:398986‑M2/1‑108 (MQ=255) gCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccc > 2:1709109‑M2/1‑108 (MQ=255) gCGACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATAAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttata > 1:1654429‑M2/1‑55 (MQ=255) gACCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgc > 1:1741912‑M2/1‑53 (MQ=255) aCCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTa > 1:1461437/1‑136 (MQ=255) aCCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaa < 1:716368‑M2/136‑85 (MQ=255) aCCGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgttt < 1:588446‑M2/136‑85 (MQ=255) aCCGATGC‑TCTTATTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCGGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgaagtctattaaaatggacccta < 1:1083025‑M2/135‑31 (MQ=255) ccGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaa < 1:2518316‑M2/136‑86 (MQ=255) ccGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctacc < 1:2422888‑M2/136‑33 (MQ=255) cGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGt > 1:1228682/1‑136 (MQ=255) cGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAATCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGGCGGTtgttgttgatgtgtattaatatggaccctaccg < 2:452376‑M2/136‑34 (MQ=255) cGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaa < 1:2301988‑M2/136‑87 (MQ=255) cGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaa < 2:1185717‑M2/136‑87 (MQ=255) cGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgc < 1:130852‑M2/136‑87 (MQ=255) cGATGC‑TCTTTTTTT‑ATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctatagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttga < 1:1630697‑M2/136‑87 (MQ=255) tGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTg < 2:415451/135‑1 (MQ=255) atgctctttttttattttcTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaa < 2:188419‑M2/130‑89 (MQ=255) gctctttttttatttTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgcattgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaata > 1:1421835‑M2/5‑46 (MQ=255) ctctttttttattTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacc < 1:2497289‑M2/61‑20 (MQ=255) tctttttttatTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaataga < 1:30721‑M2/134‑93 (MQ=255) tctttttttatTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagag < 1:2283991‑M2/77‑36 (MQ=255) tctttttttatTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttt < 2:336900‑M2/101‑60 (MQ=255) tctttttttatTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttg < 1:677016‑M2/134‑40 (MQ=255) tctttttttatTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCACTtgtttttgatgtctattaaaattgaccctacaggatttg < 1:2256840‑M2/134‑40 (MQ=255) tttttttCTGTTCTATTATATCAAACGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttacatgtcttgcaaaaaatagaag > 1:1584582‑M2/1‑42 (MQ=255) tttttttATTTTCTATTATATCAAAAGCATGTCTGGAAAAATtcgaagatttttccagacctgcattgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag > 2:499753‑M2/1‑42 (MQ=255) tttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag > 2:941252‑M2/1‑42 (MQ=255) tttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag > 1:1204381‑M2/1‑42 (MQ=255) tttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgat > 1:2216999‑M2/1‑42 (MQ=255) tttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAAAtcgaagatttttccagacctgcttagtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaag > 2:839152‑M2/1‑42 (MQ=255) ttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgatt > 1:2020305‑M2/1‑41 (MQ=255) ttttttATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCa < 2:1288500/136‑1 (MQ=255) ttATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgac > 1:1009786‑M2/1‑90 (MQ=255) ttATTTTCTATTATATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgac > 2:754446‑M2/1‑90 (MQ=255) tatattttatCAAAAGAAGTACTGGATAAATtagaagatttttccagacatgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgtaaatttctttatataaagcaatatcggattgatcggca > 1:881361‑M2/3‑31 (MQ=255) tCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggca > 2:889432‑M2/1‑31 (MQ=255) tCTATTATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggca > 1:633339‑M2/1‑31 (MQ=255) cTATAATATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaaggcgtgataatat > 2:1917426‑M2/1‑30 (MQ=255) tattatATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatc > 2:30624‑M2/1‑29 (MQ=255) tattatATCAAAAGCAGGTCTGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatc > 1:2161552‑M2/1‑29 (MQ=255) tattatATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgac > 1:1491453‑M2/1‑29 (MQ=255) tattatATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttcgagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgac > 2:1045772‑M2/1‑29 (MQ=255) tattatATCAAAAACAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacct < 2:135519‑M2/133‑52 (MQ=255) ttatATCAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactt > 1:1038559‑M2/1‑27 (MQ=255) cAAAAGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacg < 2:1582636‑M2/102‑82 (MQ=255) aaaaGCAGGTCTGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgt > 2:22428‑M2/1‑20 (MQ=255) tacatGTCTGGAAAAATCCGTAGATTTTTCCAGACCTGTTTTGTCTCTAGAGACTTATGGCACAGCCTCTtgtttttgatgtatattaaaatggaccctaccggatttgaaccgacgtcctcctgcatgcgaagca > 2:2308130‑M2/3‑70 (MQ=255) aacagGTCTTGAAAAATCCGAATATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTATtgtttttgatgtctattaaaatggaccctaccggttttgaaccgacgacctcctgcatgcgaagca > 1:2398927‑M2/3‑70 (MQ=255) aacagGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagca > 2:2486929‑M2/3‑70 (MQ=255) aGCAGGTATTGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaaggcgtgataatatagttaatgaaaac > 2:523649‑M2/1‑17 (MQ=255) gCAGGTCTGGAAAAATtcgaagatttttccagagctgcgttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaaggcgtgataatatagttaatgaaaacg < 2:676393‑M2/136‑121 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACCGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag < 1:1875591‑M2/135‑68 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag < 2:902128‑M2/135‑68 (MQ=255) acaGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcag < 1:1545131‑M2/135‑68 (MQ=255) tCTGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcagg > 2:2428172‑M2/1‑64 (MQ=255) cTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTcc < 2:206042/136‑1 (MQ=255) tGGAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcttttttataaaaaatatttaaatgtcttgcaaaaaatagaaggcgtgataatatagttaatgaaaac < 2:650003‑M2/128‑120 (MQ=255) tGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcggcgtacttggtcttg < 2:1629746‑M2/136‑128 (MQ=255) tGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgtacttggtcttg < 2:2519791‑M2/136‑128 (MQ=255) tGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgtacttggtcttg < 1:2129858‑M2/136‑128 (MQ=255) tGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgt > 2:1793302‑M2/1‑9 (MQ=255) tGGAAAAATccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgt < 1:1793302‑M2/125‑117 (MQ=255) tGGAAAAATCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctc < 1:487391‑M2/135‑74 (MQ=255) tGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCt > 2:1311093/1‑136 (MQ=255) gAAAAATtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatcattgtcgtgtacaccgaacata < 1:963374‑M2/136‑130 (MQ=255) aaaaaTtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggcttgatcggcatcattgtcgtgtacaccgaacata > 1:1284839‑M2/1‑6 (MQ=255) aaaaaTCCGAAGATTTTTCCAGACCTGTTTTGTTTCTAGAGACTTATGTCACAGCCTCTtgtttttgatgtctattaaaatggaccctaccggatttgaaccgacgacctcctgcatgcgaagcaggcgctctcc > 2:583698‑M2/1‑59 (MQ=255) aaaaTccgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgcctttttgaaagtgttagttcgttgacgtttgagtgctgattagtcggtctgactttcagcgtacttggtcttgatat > 1:76007‑M2/1‑5 (MQ=255) aaaTtcgaagatttttccagacctgctttgtttctagagacttatgtcacagcctcgtatgggttaatcgaaaaattctttatataacgcaataacggctt < 2:1996887‑M2/101‑98 (MQ=255) | ‑‑GATAATTTCGTAGAGTATCGGGTGCGACCGATGC‑TTTTTTTTTTATTTTCTATTATATCAAAAGCAGGTCTGGAAAAATCCGAAGATTTTTCCAGACCTGCTTTGTTTCTAGAGACTTATGTCACAGCCTCTTCGTATTTAACAACTGCATTGCAATTGCTAGTTGACCTTGCATCAATCAACTATGGTGACGCGATGAAATTCCTTCTG > TrimmedAssembly_T66_contig_9/1‑210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |