| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_17 | = 66737 | 4 (0.020) | 1078 (1.700) +A |
112/258 | 0.0 | 99.8% | intergenic (+451/–) | rasttk_feature_annotation_tool=elepa@bvbrc/– | hypothetical protein/– |
| ? | TrimmedAssembly_T66_contig_32 | 1 = | 0 (0.000) | intergenic (–/‑42) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
Only 100 of 1086 total aligned reads displayed.
TAGTTGTGTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_17/66609‑66737‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 | aAGTTGTGTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTCGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAA > 2:1457356/2‑136 GTTAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAG < 2:2010270/135‑1 GTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAG < 1:1873986/135‑1 TTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGT > 1:2340218/1‑135 TAAGCGATTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTAC < 1:2263988/136‑1 TAAGCGATTAACACACGGACTTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTAC > 1:1008952/1‑136 TAAGCGATTAACACACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTA > 2:1637398/1‑132 AGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACA > 1:681367/1‑135 TTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTA < 1:1224450/136‑1 TTAACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTA > 1:2456063/1‑136 acaCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAAT > 2:858006/4‑136 acaCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAG > 1:376636/4‑123 ACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAAT > 1:1720088/1‑136 ACGCATGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAAT > 1:5510/1‑136 ACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAAT < 2:2442332/136‑1 tGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCT < 1:240807/135‑1 acgatTTAGACCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCT > 1:2747660/6‑136 acgatTTAGACCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACAATTGCGAAGTCAATTCGCTAGCAAATAAATTTTATTACAACATTAAATGAGCT > 1:587049/6‑136 GAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTT > 1:998114/1‑136 AATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTAGCTAGCAAATAACTTTTAGTAAAACATTAAATGAGATTTT > 1:2309960/1‑136 AGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGA < 2:1955176/136‑1 TCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAAC > 1:1921104/1‑135 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTCGGGTCTCTAGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATATTAGTACAACATTAAATTAGCTTTTTAGAACTAATCAT > 1:1559034/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 2:1895367/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 2:2467960/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAG < 2:2802788/102‑1 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAG > 1:2802788/1‑102 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCACATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAg > 1:1592202/1‑135 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCAT > 1:1638155/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCAT > 1:1974608/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCAggag > 1:1171110/1‑132 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 2:687756/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 1:799555/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 1:1814500/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 1:1749645/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 1:2217837/1‑136 AAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCAT > 2:403411/1‑136 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATT > 2:1696132/1‑136 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATT > 2:2205998/1‑136 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATT > 2:154667/1‑136 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATT > 2:4476/1‑136 AAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATGTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATT > 2:1288796/1‑136 CTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAAT < 1:519068/136‑1 CTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAT < 2:289440/136‑1 TGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATT < 1:858006/136‑1 CAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAG < 1:2370422/136‑1 TTCGACGAATCAATTGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTG < 2:1403585/136‑1 TTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTG < 1:1322349/136‑1 TCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGA < 2:2568850/136‑1 GACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGAT > 1:1399927/1‑135 CGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGAT > 2:1189045/1‑133 GAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTG < 2:2310440/136‑1 GAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTG < 2:2344498/136‑1 ATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGG < 1:20436/135‑1 AATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAG > 2:2245418/1‑136 AGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAC < 1:734152/136‑1 GGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAC > 2:2056106/1‑134 GGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAAC > 1:948220/1‑134 GGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAAT < 2:2524089/104‑1 TCTTGATTTTGACTCAAGAGCAAACCAATTGCGAACTCCATTCGCTAGCGAATACATCTTAGTACAACAGGACAGGAGCATTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:173455/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:2736057/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 1:2170601/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 1:335099/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:2137068/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:1100750/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:2652488/136‑1 TCTTGATTTTGAATCAAGAGCAAAACATGTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:947655/136‑1 CTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCG > 1:2610784/1‑136 TGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGC > 1:481431/1‑136 TGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGC > 2:1361039/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 2:612292/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:1457350/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG < 2:2774990/136‑1 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGGTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:1271219/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCCTTAATTTGAGAGTTTGATCCTGGCTCTGGACGAACGCTGGCGGCG > 1:1118114/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG < 2:498991/136‑1 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:2086330/1‑136 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG < 1:2537040/136‑1 GATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG > 1:41937/1‑136 TTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGT < 1:1361039/135‑1 TTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCC < 2:1326462/136‑1 GAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTA > 1:2686546/1‑136 GAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTA > 1:257437/1‑136 AAGAGCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACA > 1:628400/1‑136 GCAAAACATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCA > 1:286774/1‑136 AAAACAATTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCA < 2:1499180/134‑1 ACATTTGCGAAGTCAATTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCG > 1:1048584/1‑136 CATTTGCGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 2:784282/136‑1 CGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCG < 2:531837/109‑1 CGAAGTCAATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGC < 2:1038538/105‑1 AATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAGCTCTGGTA > 1:1507776/1‑136 ATTCGCTAGCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTAT > 2:1071982/1‑136 ATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTAT > 2:2613430/1‑136 ATTCGCTAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCA < 1:2781363/116‑1 TTCGCTAGCTAATAAATTTTAGTACAACATTATATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGA < 2:1603963/121‑1 TTCGCTAGCGAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATT < 2:1835250/136‑1 TAGCAAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAGCTCTGGTATTGATTG < 2:336198/136‑1 GCAAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > 2:2383393/1‑136 AAATAAATTTTAGTACAATATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > 2:747693/1‑134 AAATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAGCTCTGGTATTGATTGGT > 2:1253851/1‑134 | TAGTTGTGTTAAGCGATTAACGCACGGAATTAGATCTTTGAAAACTGAACAAAGTTTCGACGAATCAAATGTGTAGGGTCTCTTGATTTTGAATCAAGAGCAAAACATTTGCGAAGTCAATTCGCTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_17/66609‑66737‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAAATTTTAGTACAACATTAAATGAGCTTTTTAGAACTCATCATTAATTTGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAACTCTGGTATTGATTGGT > TrimmedAssembly_T66_contig_32/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |