| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_3 | 176059 = | 261 (0.920) | 183 (0.700) | 74/240 | 0.3 | 41.5% | coding (556/804 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | = 178058 | 274 (1.040) | coding (242/633 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Aggregation promoting factor | |||||
Only 100 of 288 total aligned reads displayed.
CAACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/176202‑176059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgacttcaaCACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC < TrimmedAssembly_T66_contig_3/178058‑177927 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTATCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:1104384/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG < 2:1009124/136‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG < 1:2276146/136‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG < 1:2372918/136‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:1793908/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG < 1:853021/136‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:1689956/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG < 2:2111966/136‑1 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:1239037/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:740248/1‑136 AACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAAC < 1:2555051/135‑1 ACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGA < 2:1004230/136‑1 ACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 2:2746037/1‑135 ACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:2067963/1‑135 CGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGAC < 1:940553/136‑1 GAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACT < 2:138783/136‑1 GAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACT < 1:593616/136‑1 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA > 1:656994/1‑136 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA > 2:1185146/1‑135 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA < 2:2133385/135‑1 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA > 1:1062847/1‑135 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA < 1:2674415/135‑1 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA > 2:329489/1‑135 GCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA > 1:1275755/1‑135 GCTGCTTATTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCA < 1:1591798/135‑1 TGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA > 2:2300645/1‑134 GCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACAC < 2:680592/136‑1 TCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGA < 1:549576/136‑1 GCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACG > 1:276676/1‑117 TCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACA < 2:2569449/134‑1 aAACGAAATCAGCTGCTAGCAAAGCTTCAAGTTATGCTGAAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGAATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAAC < 1:1476362/135‑1 CAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAAC < 1:2398330/136‑1 AACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACG > 2:2637088/1‑136 AACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACG < 1:1323039/136‑1 ATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACG < 1:2341743/136‑1 CAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 2:495802/136‑1 CAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 2:1564976/136‑1 CAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGAC < 1:535446/136‑1 CAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTAATCATGTGCTACTAGATCAGCTGAATCATCAACAGCTTCAACATCCTCACCGAATTCAACACAGACTACTCAACTAACGACCACGAC < 2:2479251/136‑1 GCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACAC > 2:1487443/1‑136 GCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACAC > 2:1738478/1‑136 GCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACAC > 1:1219149/1‑136 GCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACAC > 1:806443/1‑136 TGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCCACGACTTCAACACAGACGACTCAACAAACGACCACGACACA < 2:659363/135‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACTACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 2:526614/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 2:384598/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 2:1332567/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:1678015/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:329489/136‑1 GCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:570894/136‑1 GCTAGCAAAGCTTCAAGTTCTGCTGCAACCAATAGTAAAGATTCATCAAGTGCTACTAGCTCAGCTGCATAATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT < 1:2491171/136‑1 TAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT > 2:271974/1‑134 AAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCA > 2:2406271/1‑134 TCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAG > 1:15280/1‑135 GCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAA < 2:866794/136‑1 CTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCGTCAACAACCACAACGACTTCAACACAGACGACTCAAAAAACGACCACGACACAATCATCAGCTCAGACTAGTCAA > 2:817840/1‑134 CACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCT < 2:1148395/136‑1 ACTAGTCAAGCTTCATCATGTGCTACTAGCTCAGTTGCAAAATCAACAGCTTCAACAACCTAAACGACTTAAACACAGACGAATCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTC < 1:1481816/136‑1 CAAGCTTCATCATGTTATACTAGCTCTGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACC < 2:806443/134‑1 CAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCACCGACTTCAACACAGCCGACTCCACAAACGCCCACGACACACTCCTCAGCTCAGACTAGTCAAACTCAAGCTCAACC < 2:305583/134‑1 CAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACC < 1:504604/134‑1 TTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCC < 1:681959/134‑1 TTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCC < 1:1925170/134‑1 CATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAA > 2:976949/1‑134 CATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAA > 2:1933220/1‑134 ATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCT < 2:2352473/136‑1 AAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAG > 1:983249/1‑135 AAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCA > 1:2151433/1‑99 AAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCA < 2:2151433/99‑1 AGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCC > 2:1115264/1‑136 TACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGAC > 2:1761235/1‑135 TACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAAT > 1:36379/1‑83 CTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCA < 2:1460260/136‑1 TCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAA < 1:2801467/136‑1 TGCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 1:1089078/1‑136 GCATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAA > 1:2190215/1‑135 CATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAAC > 1:1958105/1‑136 ATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACA < 2:2807675/136‑1 ATCATCAACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACA < 1:442935/136‑1 ACAGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTA > 1:482276/1‑136 AGCTTCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGC > 1:189557/1‑136 TCAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAAC < 2:625454/136‑1 CAACAACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAA > 2:1627988/1‑134 AACCTCAACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCT < 2:2190215/136‑1 AACTACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTCGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACATGCTGCTCAG > 2:557699/1‑136 ACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGA < 1:2005543/136‑1 ACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGA < 2:2530594/136‑1 ACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAG > 2:2041494/1‑135 ACGACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAA < 2:2255973/114‑1 GACTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACG > 1:1564221/1‑136 CTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGA < 2:1835734/135‑1 CTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACG > 1:26478/1‑134 CTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACG > 2:1802281/1‑134 CTTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTC > 1:1391795/1‑102 TTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACT < 1:664485/136‑1 TTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACT < 2:2691390/136‑1 TTCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACT < 2:2501101/136‑1 TCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC > 1:850876/1‑136 TCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC > 1:1770088/1‑136 TCAACACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC > 1:1015206/1‑136 CAACGAGTGCTGCTTCTTCAGCAAGCTCAACGCAATCAGCTGCTAGCCAAGCTTCAAGTTCTGCTGCAACCACTAGTCAAGCTTCATCAAGTGCTACTAGCTCAGCTGCATCATCAACAGCTTCAACAACCTCAACGACTTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_3/176202‑176059‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgacttcaaCACAGACGACTCAACAAACGACCACGACACAATCATCAGCTCAGACTAGTCAAACTCAAGCTCAACCGAGCCAAGCTAGCCAGACCCAATCAAGTCAAACACAAACTAGCAAACCTGCTGCTCAGACGACTC < TrimmedAssembly_T66_contig_3/178058‑177927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |