| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_33 | 1 = | 0 (0.000) | 85 (0.640) +GAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGA |
29/156 | 0.6 | 72.1% | intergenic (–/‑193) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_9 | = 79 | 110 (0.440) | intergenic (–/+180) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein | |||||
Only 100 of 179 total aligned reads displayed.
CAACAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_33/134‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑ < TrimmedAssembly_T66_contig_9/79‑1 |||||||||||||||||||||||||||||||||||||||||||||||||||| CAACAATTAAAAGTTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGA < 2:1550282/136‑1CAACAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTGAATTTCAGTTTTATAGAAAACGATTTCATTAACTATATTATCACGCCTACTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGA < 2:406323/136‑1 AACAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAG < 1:2617103/136‑1 AACAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAG < 1:1337374/136‑1 ACAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGG < 2:1365116/136‑1 CAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAG > 1:2827517/1‑134 CAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAG > 1:380190/1‑134 AAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTG < 1:309937/135‑1 AGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACAT < 1:1361667/136‑1 TAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAA < 2:2111331/135‑1 ATGCCTCAAAGAGTATGATTTCCAATCCTTAATGTCAGTTTTATAGAAAAAGTTTTCATTAACTATTTTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTC < 1:941467/136‑1 ATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTC < 2:1389797/136‑1 ATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTC < 2:236399/136‑1 CTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTA > 1:1785079/1‑136 CTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTA > 2:1252195/1‑136 CTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCT < 2:4359/135‑1 CTCAAAGAGTATGAGTTACAATCCTTAATGTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCT < 2:2841276/135‑1 TCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCTTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAG < 2:1082223/136‑1 TCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAG < 1:1710072/136‑1 GAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACA > 2:1866988/1‑136 GTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACA < 2:2075966/134‑1 GTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACA < 2:450953/134‑1 GTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACA < 2:1143913/134‑1 GAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 1:2660530/1‑136 GAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 1:1394338/1‑136 GAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 2:575407/1‑136 GAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 1:560244/1‑136 GAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 1:273275/1‑136 GAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAG > 1:1963459/1‑136 GTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGG > 1:2359173/1‑135 ATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA > 1:701867/1‑136 ATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA > 1:658764/1‑136 ATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA > 2:1487776/1‑136 ATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA > 1:2547152/1‑136 ATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA > 2:734046/1‑136 ATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA > 2:1873217/1‑136 ATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAA > 2:2660311/1‑136 CCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGAAAGACAGTTAAATATTTTTTATAAAAAATAGGATGTGACATAAGTCTCTAGAAACAAATCAGGTCTGGAAAA > 2:2152975/1‑136 TTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAAT < 1:2060305/136‑1 AATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCT > 1:2282893/1‑136 TTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTC > 1:635897/1‑136 TTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCA < 1:1761974/119‑1 TTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 1:2850417/136‑1 TTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 2:1694623/136‑1 TTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTATTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 2:2105302/136‑1 TTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTT > 1:1242929/1‑136 TTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTT > 1:1276581/1‑135 TTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTT > 2:1162200/1‑135 TTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCG < 2:311874/129‑1 tataatACGTTTTCATTAACTATATTCTCACGCCTTCTATTTTTTGCAAGATATTTAAATATTTTTTATACAAAAGAGGCTGTGACATAAGTCTCTAGAAACAACGCATGTCTTGAAAAATCTTCGAATTTTTCCA < 2:347035/130‑1 TAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA < 1:155158/136‑1 TAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA < 1:2013815/136‑1 TAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA < 1:2722597/136‑1 TAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA < 1:2680020/136‑1 TAGAAAACGTTTTCATTAACTAGATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCA < 2:2634924/136‑1 AACTTTTTCATTAACTATATTATCACGCCTTCTATTTTTTTAAATACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGAAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCT < 1:2169880/136‑1 ACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGAACT > 1:2233788/1‑135 CGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAACGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGC < 2:1754892/136‑1 CGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGC < 1:1306052/136‑1 CGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGC < 2:686290/136‑1 TATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATA < 1:605019/136‑1 TCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA > 1:1509850/1‑136 TCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATA > 2:2781609/1‑136 CTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAATGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAta > 1:997175/1‑134 CTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAA > 2:469149/1‑136 CTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAA > 2:1943752/1‑136 CTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAA > 2:1121743/1‑136 CTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAA < 2:721783/128‑1 CTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAAACTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAA > 1:451629/1‑136 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAATGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga > 2:850229/1‑134 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATATAAAAAga > 2:2850461/1‑134 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga > 2:639003/1‑134 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga > 2:13334/1‑134 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga > 2:2078775/1‑134 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga < 1:853985/136‑3 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAG < 2:1279562/71‑1 TCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAG > 1:1279562/1‑71 CTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAgag < 2:2283549/136‑4 CTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga > 1:967800/1‑133 CTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAga > 2:2006112/1‑133 TTTTTTGCAAGACATTTAAATATTTTTTATTAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAATGCAGGTCTGGAAAAATCTTCGAATTTGTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAgagca > 1:1045662/1‑130 TTTTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAgagca > 1:2110262/1‑130 TTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:1785079/136‑1 TTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 1:722632/136‑1 TTTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAAATTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCG < 2:2528774/136‑1 TTTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGG < 2:2825304/136‑1 gTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:971482/135‑1 TTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 2:309457/136‑1 TTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:2781609/136‑1 TTGCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:1197170/136‑1 TTGAAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAATTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:423634/136‑1 TTGAAAGAAATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGT < 1:463473/136‑1 GCAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTC > 1:2219819/1‑135 CAAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTATTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 2:172769/1‑136 AAGACATTTAAATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGC > 1:1635313/1‑135 ATATTTTTTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCT < 1:2000465/136‑1 TTATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAAT > 1:1046807/1‑136 TATAAAAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATT < 2:2288110/136‑1 ATAAAAAAGAGGCTGTGACCTAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTA > 2:2194729/1‑136 AAAAGAGGCTGTGACATAAGTCTCTAGAAACAAAGCAGGTCTGGAAAAATCTTCGAATTTTTCCAGACCTGCTTTTGATATAATAGAAAAT‑AAAAAAAGAGCATCGGTCGCACCCGATACTCTACGAAATTATCct < 2:2233788/136‑3 |||||||||||||||||||||||||||||||||||||||||||||||||||| CAACAAGTAAAAGGTAATGCCTCAAAGAGTATGAGTTACAATCCTTAATTTCAGTTTTATAGAAAACGTTTTCATTAACTATATTATCACGCCTTCTATTTTTTGCAAGACATTTAAATATTTTTTATAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < TrimmedAssembly_T66_contig_33/134‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTTTCCAGACCTGCTTTTGATATAATAGAAAATAAAAAAAAAAGCATCGGTCGCACCCGATACTCTACGAAATTATC‑‑ < TrimmedAssembly_T66_contig_9/79‑1 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |