| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | = 88614 | 151 (0.880) | 277 (1.220) | 72/258 | 0.1 | 78.7% | coding (223/300 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_3 | 2 = | 0 (0.000) | coding (2/474 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | CRISPR‑associated protein Cas1 | |||||
Only 100 of 278 total aligned reads displayed.
TGTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88479‑88614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGAT > TrimmedAssembly_T66_contig_3/2‑134 GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGG < 1:1632366/136‑1 GGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGG < 2:1191085/136‑1 TCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGT > 1:2457094/1‑136 CATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTG > 1:1393111/1‑135 GAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATA > 1:2832292/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAA > 2:914184/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAA > 1:474716/1‑136 AATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTACTATACAATACAGAAATCTTTTATGCATTTACACAAGATATATTACGATCTCCGGGAGTAAGTAGTGGCTAAAAA > 2:2431481/1‑136 CTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATT > 2:140733/1‑136 CTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATT > 2:1867853/1‑136 CTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATT < 1:1651175/136‑1 CTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATT > 1:1821638/1‑136 GTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCA > 2:1242605/1‑136 TGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCAT > 1:1888525/1‑136 ATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTG > 1:2623457/1‑136 GTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTT < 2:2347185/136‑1 TTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTAT < 2:813808/136‑1 TTTCTGAGGTTACTAAAGATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTAT < 2:152093/136‑1 CTGTGGTTACTAAATATCATAAGGGAAGTCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTG < 2:653114/136‑1 CTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTG < 1:826610/136‑1 CTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTG < 1:7606/136‑1 CTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTG < 1:914184/136‑1 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGG > 2:156544/1‑136 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGG > 2:2503459/1‑136 TGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTAACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGG > 2:1790802/1‑136 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 1:630399/136‑1 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 2:306133/136‑1 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 1:2004202/136‑1 GTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGT < 2:2042994/136‑1 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTG > 2:377163/1‑135 GGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTG > 1:2071894/1‑135 TACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCA > 2:2168154/1‑136 CTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTG > 2:1883113/1‑127 ATAAGGGAAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGGGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTC > 1:193410/1‑136 AAGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTT > 2:565140/1‑136 AGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTT < 1:120763/136‑1 AGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTT < 2:1071492/136‑1 AGGCATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTT < 1:1095889/136‑1 ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGC > 2:1834490/1‑135 ATTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGC > 1:2601790/1‑135 TTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCC < 2:2601973/136‑1 TTCCCTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCC < 2:2307675/136‑1 CTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATT > 1:976572/1‑136 CTATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATT > 1:17597/1‑136 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA > 2:688940/1‑136 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:530575/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:1433413/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:1082676/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:2742379/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 2:1299677/136‑1 TATTTCTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 1:1968786/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATatac > 2:1119564/1‑129 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCT < 1:1101440/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCT < 2:2495995/136‑1 CTATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAAC > 1:1786953/1‑133 ATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGC < 1:1384248/136‑1 ATACAATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGC < 2:496080/136‑1 ATACAATTCAGAAATCTTTTATGAATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGC < 1:2175959/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:1636393/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:1678615/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:1821638/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:1192937/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 2:1283235/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC < 2:2555029/136‑1 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:2758299/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:1765588/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTC > 1:2354381/1‑136 AATTCAGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTA < 2:757948/125‑1 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACTCTGCACTCAACT > 2:2680424/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 2:1124303/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 2:474758/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 1:2208415/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 1:1070699/1‑135 AGAAATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCACAGTTCTACCGACGAGATTTTAGCCCAATTAACGCTGCACTCAACT > 1:784678/1‑135 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACG < 2:1388027/135‑1 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACG < 2:1765588/135‑1 AATCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACG < 1:1012703/135‑1 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT > 1:148957/1‑136 TCTTTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGAT < 2:148957/136‑1 TTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACG < 1:1036624/136‑1 TTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACG < 1:156544/136‑1 TTTATGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACG < 1:1834490/136‑1 taTGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCC < 1:1744467/134‑1 taTGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCC > 1:345449/3‑136 taTGCATTTACACAAGATAATTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCC > 1:710235/3‑136 TGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGT < 2:2457094/136‑1 TGCATTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGT < 1:1591649/136‑1 gcaTTTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTG < 1:2503459/133‑1 TTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGT < 2:1752896/136‑1 TTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGT < 1:377163/136‑1 TTACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGT > 2:1027227/1‑136 ACACAAGATATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTA < 1:56572/136‑1 ATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGag > 2:2824574/1‑134 ATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTG > 2:1320782/1‑136 ATTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTG > 2:1832924/1‑136 TTTTACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGA > 1:417849/1‑136 ACGCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCG > 1:1331383/1‑136 GCTCTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAG < 2:2758299/136‑1 CTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGA < 2:2184464/136‑1 CTCCGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGA > 1:2164463/1‑136 TGTGGTAAGTTCATTCATGGGGAATGCCTCCTGTGATGTTTTCTGTGGTTACTAAATATCATAAGGGAAGGCATTCCCTATTTCTATACAATTTAGAAATCTTTTGTGCGTTTACACAAGATATTTTACGCTCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_1/88479‑88614‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGGGAGGCAGTTGTGGCTAATAAATATTTTTCATTGTTATTTGGTGCCCAGTTCTACCGTCGAGATTTTAGCCCAATTAACGCTGCACTCAACTACGGATACGCCGTGCTGTTATCCATGGTGAATCGAGAGAT > TrimmedAssembly_T66_contig_3/2‑134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |