New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? TrimmedAssembly_T66_contig_15 = 906300 (0.000)153 (0.900)
+AGTTGCGTTGAGGTAATCAACGAACGAT
46/204 0.6 79.8% intergenic (+107/–) rasttk_feature_annotation_tool=elepa@bvbrc/– hypothetical protein/–
?TrimmedAssembly_T66_contig_17 66638 = 99 (0.540)intergenic (+352/–) rasttk_feature_annotation_tool=elepa@bvbrc/– hypothetical protein/–

Only 100 of 211 total aligned reads displayed.

TGCAATTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  TrimmedAssembly_T66_contig_15/90499‑90630
                                                                                                                                   |                                                                                                                                      
   aaTTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcg                                                                                                                                 >  2:853484‑M1/1‑129 (MQ=255)
   aaTTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcg                                                                                                                                 >  2:2576962‑M1/1‑129 (MQ=255)
   aaTTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgc                                                                                                                                  <  2:1621161‑M1/135‑7 (MQ=255)
   aaTTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgc                                                                                                                                  <  1:1297617‑M1/135‑7 (MQ=255)
    aTTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgt                                                                                                                                >  1:2159618‑M1/1‑128 (MQ=255)
    aTTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgt                                                                                                                                >  1:2184829‑M1/1‑128 (MQ=255)
               tAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatca                                                                                                                     >  2:1578843‑M1/1‑117 (MQ=255)
                aaTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaa                                                                                                                    <  2:1692690‑M1/136‑21 (MQ=255)
                aaTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatca                                                                                                                     >  2:1876459‑M1/1‑116 (MQ=255)
                aaTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatca                                                                                                                     >  1:842525‑M1/1‑116 (MQ=255)
                aaTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatca                                                                                                                     >  1:632260‑M1/1‑116 (MQ=255)
                aaTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatca                                                                                                                     >  1:2620946‑M1/1‑116 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  2:2820295‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  2:435457‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  1:2444416‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  1:2250932‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  2:868120‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  1:1077233‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  1:1253715‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  1:1788993‑M1/136‑22 (MQ=255)
                 aTTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  1:115979‑M1/136‑22 (MQ=255)
                          ttAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgattt                                                                                                          <  2:1409103‑M1/136‑31 (MQ=255)
                          ttAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgattt                                                                                                          >  2:1988341‑M1/1‑106 (MQ=255)
                          ttAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgattt                                                                                                          <  2:2227289‑M1/136‑31 (MQ=255)
                          ttAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgattt                                                                                                          >  2:2263703‑M1/1‑106 (MQ=255)
                           tAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgattta                                                                                                         >  1:336198‑M1/1‑105 (MQ=255)
                                        tgAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaa                                                                                              >  2:775074‑M1/1‑92 (MQ=255)
                                        tgAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaa                                                                                              >  1:1100750‑M1/1‑92 (MQ=255)
                                        tgAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaa                                                                                              >  1:2840‑M1/1‑92 (MQ=255)
                                          aGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtcctcaacgaacgatttagacctttgaaaactg                                                                                          >  2:729233‑M1/1‑90 (MQ=255)
                                          aGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactg                                                                                          >  2:2302977‑M1/1‑90 (MQ=255)
                                          aGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgagttagacctttgaaaactg                                                                                          >  2:82717‑M1/1‑90 (MQ=255)
                                               cacaAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaa                                                                                     >  1:1882872‑M1/1‑85 (MQ=255)
                                               cacaAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   >  2:1922475‑M1/1‑85 (MQ=255)
                                                acaAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcggtgtggtaatcaacgaacgatttagacctttgaaaactgaacaaa                                                                                    >  2:647413‑M1/1‑84 (MQ=255)
                                                  aaaGCGGTTAGCCGCTTGCTTCCAACGAAATTTAATTATAAAAAGTTTTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgtaaactgaagaaagt                                                                                  >  2:2126639‑M1/1‑82 (MQ=255)
                                                  aaaGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagt                                                                                  >  1:1275060‑M1/1‑82 (MQ=255)
                                                  aaaGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagt                                                                                  >  2:53860‑M1/1‑82 (MQ=255)
                                                  aaaGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagt                                                                                  >  2:2835126‑M1/1‑82 (MQ=255)
                                                  aaaGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagt                                                                                  >  1:1648499‑M1/1‑82 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagttt                                                                                <  1:2031893‑M1/136‑57 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagttt                                                                                <  1:2323971‑M1/136‑57 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagttt                                                                                <  1:680073‑M1/136‑57 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagttt                                                                                <  2:2617903‑M1/136‑57 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagttt                                                                                <  1:2470760‑M1/136‑57 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtt                                                                                 >  1:2274311‑M1/1‑80 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtt                                                                                 >  2:309163‑M1/1‑80 (MQ=255)
                                                    aGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtt                                                                                 >  2:1354869‑M1/1‑80 (MQ=255)
                                                         ttAGCCGCTTGCTTCCAACGAAAATTAAGTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacg                                                                           >  2:2194675‑M1/1‑75 (MQ=255)
                                                          tAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacg                                                                           <  1:2807682‑M1/135‑62 (MQ=255)
                                                          tAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacg                                                                           <  1:2707129‑M1/135‑62 (MQ=255)
                                                           aGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaa                                                                         <  1:2225029‑M1/136‑64 (MQ=255)
                                                           aGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaa                                                                         <  2:2764874‑M1/136‑64 (MQ=255)
                                                           aGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaa                                                                         <  1:2194675‑M1/136‑64 (MQ=255)
                                                            gCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaa                                                                         >  2:1523242‑M1/1‑72 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATTATTAagttgcgttgaggtaatctacgaacgatttagacctttgaaaactgaactaagtttcgacgaat                                                                        <  2:2098703‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatca                                                                      <  1:1038841‑M1/136‑67 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  1:1924961‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  1:2479527‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  1:2560807‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  1:1147181‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  1:729478‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  2:1001468‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  1:1323040‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  2:1253281‑M1/134‑65 (MQ=255)
                                                              cGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        <  2:1275060‑M1/134‑65 (MQ=255)
                                                               gcttgcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgtagaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaa                                                                     >  2:1418115‑M1/1‑69 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgt                                                                 >  2:1737373‑M1/1‑65 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgt                                                                 >  2:1392952‑M1/1‑65 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgt                                                                 >  1:1725739‑M1/1‑65 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgt                                                                 >  2:1470685‑M1/1‑65 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgt                                                                 >  1:1702258‑M1/1‑65 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgt                                                                 <  1:1523242‑M1/136‑72 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgt                                                                 >  2:1822477‑M1/1‑65 (MQ=255)
                                                                   gcttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagttt                                                                                >  2:2473541‑M1/1‑65 (MQ=255)
                                                                     ttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgt                                                               >  1:299342‑M1/1‑63 (MQ=255)
                                                                     ttCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagttt                                                                                <  1:1640516‑M1/119‑57 (MQ=255)
                                                                                            aaGTTGTTGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaa                                        <  2:115184‑M1/136‑97 (MQ=255)
                                                                                              gttgttGACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaac                                                                                                                   <  2:1716131‑M1/59‑22 (MQ=255)
                                                                                                tgttgACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacgtttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaaga                                      <  1:53860‑M1/134‑99 (MQ=255)
                                                                                                   tgACAAGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaa                                 <  2:2164584‑M1/136‑104 (MQ=255)
                                                                                                       aaGATGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacat                             >  2:1904456‑M1/1‑29 (MQ=255)
                                                                                                           tGTTGATAACTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacattt                           <  1:1392952‑M1/134‑110 (MQ=255)
                                                                                                           tGTTGATAACTTGAGATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacattt                           <  2:2246870‑M1/134‑110 (MQ=255)
                                                                                                            gTTGATAACTTGATATGATGATTAagttgcgttgaggtaatc                                                                                                                      <  2:237437‑M1/42‑19 (MQ=255)
                                                                                                            gTTGATAACTTGATATGATGATTAagttgcgttgaggtaatc                                                                                                                      >  1:237437‑M1/1‑24 (MQ=255)
                                                                                                                  aaCTTGATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtca                  >  2:1611634‑M1/1‑18 (MQ=255)
                                                                                                                       gATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattc              >  2:484823‑M1/1‑13 (MQ=255)
                                                                                                                       gATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattc              >  2:1314908‑M1/1‑13 (MQ=255)
                                                                                                                       gATATGATGATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaat                                                                        >  1:510030‑M1/1‑13 (MQ=255)
                                                                                                                          atgatgATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgcta          >  1:901215‑M1/1‑10 (MQ=255)
                                                                                                                          atgatgATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgcta          >  2:113040‑M1/1‑10 (MQ=255)
                                                                                                                          atgatgATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgcta          >  2:570614‑M1/1‑10 (MQ=255)
                                                                                                                          atgatgATTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgcta          >  2:806414‑M1/1‑10 (MQ=255)
                                                                                                                             atgatTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagca       >  1:469369‑M1/1‑7 (MQ=255)
                                                                                                                              tgatTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaa      <  2:2274311‑M1/136‑131 (MQ=255)
                                                                                                                              tgatTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaa      <  1:1876459‑M1/136‑131 (MQ=255)
                                                                                                                              tgatTAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaa      <  1:589276‑M1/136‑131 (MQ=255)
                                                                                                                                  tAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaaataa  >  1:996908‑M1/1‑2 (MQ=255)
                                                                                                                                  tAagttgcgttgaggtaatcaacgaacgatttagacctttgaaaactgaacaaagtttcgacgaatcaaatgtgtagggtctcttgattttgaatcaagagcaaaacatttgcgaagtcaattcgctagcaaataa  >  2:10788‑M1/1‑2 (MQ=255)
                                                                                                                                   |                                                                                                                                      
TGCAATTTATCAGGATAATTGGTAAATTAGTATACGTTGTTGAGGCGCACAAAGCGGTTAGCCGCTTGCTTCCAACGAAAATTAATTATAAAAAGTTGTTGACAAGATGTTGATAACTTGATATGATGATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  TrimmedAssembly_T66_contig_15/90499‑90630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.