| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_31 | 1 = | 0 (0.000) | 208 (0.620) | 68/260 | 0.2 | 100% | intergenic (–/+71) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_34 | 1 = | 0 (0.000) | intergenic (–/‑119) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 212 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTCCCCCG > TrimmedAssembly_T66_contig_31/1‑135 | taattcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCttt < 2:725663‑M1/4‑1 (MQ=255) aattcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCtttt < 1:257793‑M1/5‑1 (MQ=255) tcgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAAt < 1:50159‑M1/8‑1 (MQ=255) cgggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAAtt > 1:1106855‑M1/128‑136 (MQ=255) gggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAAttt > 2:49608‑M1/127‑136 (MQ=255) gggtcatgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAAttt > 1:1659469‑M1/127‑136 (MQ=255) gggtcatgaagatacctctttctgttttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAAttt > 2:42972‑M1/127‑136 (MQ=255) atgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCg < 2:1183578‑M1/15‑1 (MQ=255) atgaagatacctctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCg < 2:2752887‑M1/15‑1 (MQ=255) tctttcttgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGaa < 1:2673295‑M1/26‑1 (MQ=255) tgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCttt < 1:2821276‑M1/33‑1 (MQ=255) tgtttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCttt < 2:2204151‑M1/33‑1 (MQ=255) ttgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCtttttt > 1:1690828‑M1/101‑136 (MQ=255) tgtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtatagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCtttttt < 2:2788500‑M1/36‑1 (MQ=255) gtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTg < 1:232179‑M1/37‑1 (MQ=255) gtggtgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTg < 2:80136‑M1/37‑1 (MQ=255) tgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCaa > 1:2461214‑M1/95‑135 (MQ=255) tgaattaagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCaa > 2:136315‑M1/95‑135 (MQ=255) taagaataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTcc > 2:681238‑M1/90‑103 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGt > 2:1726559‑M1/85‑135 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGt > 2:2720746‑M1/85‑135 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGt > 1:424501‑M1/85‑135 (MQ=255) ataggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTg < 1:2090748‑M1/52‑1 (MQ=255) aggtcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAt > 1:1471104‑M1/83‑136 (MQ=255) tcttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggttttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAttt < 2:140229‑M1/56‑1 (MQ=255) cttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGc > 1:1428308‑M1/79‑136 (MQ=255) ttcttggcctatttgactagtctgaaaaaataaatggtctagtagagcaggtgttgcacttcaattttaaatagattCTTATAAATTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTAATTCGTGATTTGCt < 2:212133‑M1/59‑1 (MQ=255) ttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCt < 2:404213‑M1/59‑1 (MQ=255) ttcatggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTAGTGATTTGCt < 2:2302926‑M1/59‑1 (MQ=255) ttcatggccttgttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTAAATTTTTCCGTCATAGCTGAATGTCTTTTTTGCCAAATGCATTCGTGCTATGCt < 2:2126205‑M1/59‑1 (MQ=255) atggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaa < 1:1241774‑M1/62‑1 (MQ=255) ggcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAattc < 1:763033‑M1/45‑1 (MQ=255) ggcctttttgacaagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGATGAATCTCTTTTTTTCCAAAATCATTCGTGATTTGCTTaaa < 2:1821177‑M1/63‑1 (MQ=255) gcctttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTaaa < 1:741181‑M1/63‑1 (MQ=255) ttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTa < 1:2640128‑M1/68‑1 (MQ=255) ttttgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAg > 1:1000225‑M1/68‑136 (MQ=255) tgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATcttatca < 1:821657‑M1/71‑4 (MQ=255) tgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCa < 1:2496994‑M1/71‑1 (MQ=255) tgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCa < 1:1839710‑M1/71‑1 (MQ=255) tgactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGAGTTGCTTAAATCTTAGCa < 2:2822527‑M1/71‑1 (MQ=255) gactagtctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATc < 2:1333839‑M1/73‑1 (MQ=255) ctgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACAtt > 2:1635435‑M1/57‑134 (MQ=255) tgaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTc < 1:1587717‑M1/81‑1 (MQ=255) gaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCtttttt > 2:2084275‑M1/55‑90 (MQ=255) gaataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCAcattttaa < 2:1026860‑M1/82‑3 (MQ=255) ataaagaactggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAAt > 2:848210‑M1/53‑136 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACAtt > 2:1981964‑M1/46‑123 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTttgaa < 1:1192368‑M1/91‑3 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 1:1770003‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 1:2743083‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 1:404213‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 1:2010456‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 1:136086‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTg > 1:930519‑M1/46‑134 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc > 2:1286902‑M1/46‑135 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGc > 2:605147‑M1/46‑135 (MQ=255) actggtctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCa < 1:163343‑M1/91‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCa < 1:2047429‑M1/71‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCa > 2:2047429‑M1/41‑111 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 1:682838‑M1/96‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 1:1551376‑M1/96‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 2:1671608‑M1/96‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 1:654116‑M1/96‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 1:563558‑M1/96‑1 (MQ=255) tctagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgt < 1:882863‑M1/96‑1 (MQ=255) tagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgtt < 2:205662‑M1/97‑1 (MQ=255) tagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgtt < 1:593436‑M1/97‑1 (MQ=255) tagtagagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAgttgtt < 2:2499855‑M1/97‑1 (MQ=255) gagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAAt < 1:25997‑M1/102‑1 (MQ=255) gagcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATc < 2:1099622‑M1/103‑1 (MQ=255) gcaggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATcc > 2:457420‑M1/32‑135 (MQ=255) ggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCtttttt < 2:1468171‑M1/36‑1 (MQ=255) ggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:1167353‑M1/108‑1 (MQ=255) ggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:2594239‑M1/108‑1 (MQ=255) ggtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:2594088‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGTATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAAACCCGcc < 1:337048‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:1132901‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:1324278‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:2092486‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 1:2522469‑M1/108‑1 (MQ=255) gtgttgcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGcc < 2:1846644‑M1/108‑1 (MQ=255) gcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAAc > 2:421410‑M1/23‑136 (MQ=255) gcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCAGCCACCAAc < 2:2656568‑M1/114‑1 (MQ=255) gcacttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTGGTTCCAATCCCGCCACCAAc < 1:2234104‑M1/114‑1 (MQ=255) cttcaattttaaatcgcggCTTTTAATTTTTCCGTCAAAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 2:2436135‑M1/117‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 2:1342298‑M1/117‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 1:2029975‑M1/117‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 2:613928‑M1/117‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 2:669465‑M1/117‑1 (MQ=255) cttcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGAt < 2:1936911‑M1/117‑1 (MQ=255) tcaattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGt > 1:748668‑M1/18‑136 (MQ=255) caattttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGtt > 1:2127272‑M1/17‑136 (MQ=255) attttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCg < 2:2076782‑M1/122‑1 (MQ=255) ttttaaatcgaggCTTTTATTTTTTACGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATGTGCTTAAATCTTAGCATCACATTATAAATTTTTGCAGTTGTTCCAATCCCGACACCAACCATGTTCGt < 1:1915363‑M1/123‑1 (MQ=255) ttttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTTTTCCAATACCGCCACCAACGATGTTCGt < 1:2775746‑M1/123‑1 (MQ=255) ttttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGt < 2:365775‑M1/123‑1 (MQ=255) ttttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGt < 1:1270199‑M1/123‑1 (MQ=255) ttaaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGa > 2:1639715‑M1/12‑136 (MQ=255) taaatcgaggCTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGaa < 1:359394‑M1/126‑1 (MQ=255) cTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTg < 2:751557/57‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTTTAATTTTTCCGTCATAGCTGAATCTCTTTTTTGCCAAATTCATTCGTGATTTGCTTAAATCTTAGCATCACATTTTCAATTTTTGCAGTTGTTCCAATCCCGCCACCAACGATGTTCGTGAAATTCCCCCG > TrimmedAssembly_T66_contig_31/1‑135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |