| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_27 | = 3273 | 0 (0.000) | 307 (0.830) | 86/260 | 0.0 | 100% | intergenic (‑110/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Adenine specific DNA methylase Mod/– |
| ? | TrimmedAssembly_T66_contig_41 | 1 = | 0 (0.000) | intergenic (–/‑2) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 530 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGGTCG > TrimmedAssembly_T66_contig_41/1‑136 | ttaaaaagcccaaagcaatcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATaa > 2:1308283‑M2/133‑136 (MQ=255) aagcccaaagcaatcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCt < 2:648222‑M2/8‑1 (MQ=255) aagcccaaagcaatcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCt < 2:2529305‑M2/8‑1 (MQ=255) aagcccaaagcaatcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCt < 2:2025090‑M2/8‑1 (MQ=255) aaagcccaaagcaatcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCt < 2:1143860‑M2/8‑1 (MQ=255) aaagcaatcacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCaa < 1:2543590‑M2/14‑1 (MQ=255) tcacttacaatggtagtagctacttccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATCAATCTTACCAAGTAATGGc < 1:862162‑M2/22‑1 (MQ=255) tcacttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 1:2836848‑M2/22‑1 (MQ=255) cacttacaatggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGc < 1:2463337‑M2/22‑1 (MQ=255) cttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTg > 1:1002640‑M2/112‑135 (MQ=255) cttacaatggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTg > 2:1757412‑M2/112‑135 (MQ=255) atggtagtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCt > 2:1125476‑M2/107‑136 (MQ=255) tggtagtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTa < 2:1361044‑M2/32‑1 (MQ=255) gtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCt > 2:2598866‑M2/101‑108 (MQ=255) gtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCg > 1:1378094‑M2/101‑136 (MQ=255) gtaactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCg > 2:2822125‑M2/101‑136 (MQ=255) gtagctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCg > 1:921936‑M2/100‑135 (MQ=255) aactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATACATCTTACCAAGGAATGGCTGACGCCTTCGGCGTc > 2:878828‑M2/99‑136 (MQ=255) aactaattccaaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTc > 1:1507436‑M2/99‑136 (MQ=255) agctaattccaaccaatattgggagtgattactttgtgtacatctactttatctcgttttccacgtggcgcacgagcacaactggtcaatgaggggaATAAATCTTACCAAGTATTGGCTGACGCCTTAGGCGTCg < 2:41715‑M2/39‑1 (MQ=255) agctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGt < 2:1551354‑M2/37‑1 (MQ=255) agctaattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTc > 2:296876‑M2/98‑135 (MQ=255) aattccaaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCaa > 2:1909‑M2/94‑136 (MQ=255) caaccaactatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATg < 2:2195290‑M2/20‑1 (MQ=255) aaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgctctagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc < 1:1756401‑M2/49‑1 (MQ=255) aaccaatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc < 2:1781915‑M2/49‑1 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 2:1841892‑M2/22‑1 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc < 1:1146599‑M2/49‑1 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGata > 2:833235‑M2/84‑135 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGAtt > 1:1481411‑M2/84‑136 (MQ=255) aatatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGAtt > 2:1813908‑M2/84‑136 (MQ=255) ctatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 2:1893580‑M2/54‑1 (MQ=255) atatcgggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaAGAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:376167‑M2/54‑1 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 2:49255‑M2/54‑1 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:2787858‑M2/54‑1 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 2:607664‑M2/54‑1 (MQ=255) atatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:296882‑M2/54‑1 (MQ=255) agatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTGACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 2:2702414‑M2/54‑1 (MQ=255) tatagggagtgattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAg < 2:2468695‑M2/55‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 1:840903‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 1:58018‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg > 1:106254‑M2/72‑136 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 2:214868‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt < 1:2305310‑M2/64‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGtt < 1:1973529‑M2/64‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:2163580‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 2:327815‑M2/65‑1 (MQ=255) gattactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 2:1506227‑M2/65‑1 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACTCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 1:339807‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 1:493572‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 1:660221‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 2:1073589‑M2/70‑135 (MQ=255) ttactttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTgg > 1:600783‑M2/70‑135 (MQ=255) tttgggtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCgg < 1:2226349‑M2/71‑1 (MQ=255) tttgggtacatctactttatcacgttttcaacgtggcgcacgagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCgg < 2:1580407‑M2/71‑1 (MQ=255) gtacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTa < 1:183393‑M2/54‑1 (MQ=255) tacatctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTaa > 1:2503968‑M2/60‑135 (MQ=255) catctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCaaa < 2:2333783‑M2/44‑1 (MQ=255) catctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAAcc < 1:2135036‑M2/79‑1 (MQ=255) catctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAAcc < 2:1697680‑M2/79‑1 (MQ=255) atctactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCt < 2:193948‑M2/80‑1 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggtgaATAAATATTACCAATTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACAGGGTTAAACCTTAt < 1:1287533‑M2/83‑1 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcAt > 1:1101610‑M2/54‑55 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACATTAt > 1:2396890‑M2/54‑136 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTAt > 2:760140‑M2/54‑136 (MQ=255) tactttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTAt > 1:1448429‑M2/54‑136 (MQ=255) ctttatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGa < 1:1702084‑M2/85‑1 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTg < 1:999370‑M2/65‑1 (MQ=255) tatcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATcc > 2:1201544‑M2/49‑136 (MQ=255) tcacgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAg < 1:1201544‑M2/90‑1 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAt > 1:788543‑M2/44‑136 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAt > 2:1966561‑M2/44‑136 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAAt > 1:2031622‑M2/44‑136 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGc < 1:2645003‑M2/22‑1 (MQ=255) cgttttcaacgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTAc > 2:386945‑M2/44‑92 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATg < 1:1660666‑M2/84‑1 (MQ=255) tttcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 1:1135650‑M2/95‑1 (MQ=255) tttcaacgtggcgcactagcacaactggtcaaggaggggaACAAATCTTACCAAGTAAGGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTa < 2:229478‑M2/95‑1 (MQ=255) tcaacgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGc > 1:1956445‑M2/39‑135 (MQ=255) acgtggcgcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCa > 2:2422135‑M2/36‑135 (MQ=255) acgtggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCa > 1:2709947‑M2/36‑135 (MQ=255) ggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAg < 2:2361646‑M2/105‑1 (MQ=255) ggcgcactagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAg > 2:1442456‑M2/32‑136 (MQ=255) gcactagcacaactggtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATg < 2:2060162‑M2/108‑1 (MQ=255) actagcacaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCa > 1:1433959‑M2/27‑136 (MQ=255) acaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGc < 2:353591‑M2/116‑1 (MQ=255) acaactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGc < 1:727861‑M2/116‑1 (MQ=255) aactggtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCaa > 1:1252131‑M2/19‑136 (MQ=255) gtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 2:541621‑M2/14‑136 (MQ=255) gtcaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 2:697740‑M2/14‑136 (MQ=255) gtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 1:2089922‑M2/14‑136 (MQ=255) gtcaatgaggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 2:1148688‑M2/14‑136 (MQ=255) gacaatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGc > 1:179846‑M2/14‑136 (MQ=255) caatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCggg < 1:121559‑M2/72‑1 (MQ=255) caatgaggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCgg > 2:2689705‑M2/12‑136 (MQ=255) ggggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc > 1:406082‑M2/6‑136 (MQ=255) ggggaATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc > 1:2248570‑M2/6‑136 (MQ=255) ggcATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGc < 1:1573851‑M2/131‑1 (MQ=255) aTAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGgtcg > 2:160608/1‑136 (MQ=255) aTAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGgtcg > 1:1905774/1‑136 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAATCTTACCAAGTAATGGCTGACGCCTTAGGCGTCGCCAAAGCTACGATTAGCTATGAGTTGGACCGGGTTAAACCTTATGATCCAGAATTAGCTCAGCAAGATGCAGATCGCAAAAGGCGGAATTGCGGTCG > TrimmedAssembly_T66_contig_41/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |