| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_28 | 1 = | 0 (0.000) | 326 (0.470) | 77/260 | 0.2 | 100% | intergenic (–/+125) | –/rasttk_feature_creation_tool=RNA_reps_LSU_rRNA | –/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | TrimmedAssembly_T66_contig_4 | = 245870 | 0 (0.000) | intergenic (‑69/–) | rasttk_feature_creation_tool=tRNAscan‑SE/– | tRNA‑Asn‑GTT/– | |||||
Only 100 of 337 total aligned reads displayed.
GGCGGGCTCGAACCGTCGACATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_4/245737‑245870 | tagtcttagttcgcccagtaggctaatttttggcaacaaaaaaaggaatcgaattaacgattccttaggttGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCTAAGAAgcttaa < 2:1850039‑M2/65‑3 (MQ=255) cGGGCTCGAACCGTCGACATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaa > 1:2017166‑M2/1‑132 (MQ=255) ggCTCGAACCGTCGACATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaact < 1:2511729‑M2/134‑5 (MQ=255) cTCGAACCGTCGACATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaact < 1:484759‑M2/132‑5 (MQ=255) cGTCGACATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCTACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcga > 2:1286530‑M2/1‑121 (MQ=255) aCATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg < 2:360423‑M2/136‑21 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 1:2850518‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 1:622704‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 2:484759‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 1:1534879‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 2:1164876‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 2:1668205‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 2:2187476‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 2:1647688‑M2/1‑115 (MQ=255) cATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 1:1365754‑M2/1‑115 (MQ=255) cATATTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCATACCCTCGCAGGGAGCGATCCCCCACCGACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 2:630875‑M2/1‑115 (MQ=255) tCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaa > 1:128966‑M2/1‑113 (MQ=255) ttAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggt > 1:2111892‑M2/1‑107 (MQ=255) tAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgt > 2:2288483‑M2/1‑106 (MQ=255) aGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctc > 1:1730243‑M2/1‑97 (MQ=255) aGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctc < 2:2608177‑M2/136‑40 (MQ=255) aGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctc > 2:2787302‑M2/1‑97 (MQ=255) aGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctc < 1:30663‑M2/136‑40 (MQ=255) gcTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgc > 2:1062611‑M2/1‑94 (MQ=255) gcTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgc > 2:723775‑M2/1‑94 (MQ=255) gcTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgc > 2:2717028‑M2/1‑94 (MQ=255) gcTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgc > 1:1581252‑M2/1‑94 (MQ=255) tctACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccat > 2:297054‑M2/1‑92 (MQ=255) ccAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtc > 1:2436611‑M2/1‑88 (MQ=255) cAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtc < 1:1837594‑M2/135‑49 (MQ=255) cAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtc < 2:1120708‑M2/135‑49 (MQ=255) cAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtc < 1:3962‑M2/135‑49 (MQ=255) aCTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcacc > 1:1793988‑M2/1‑85 (MQ=255) gAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccac < 1:2674751‑M2/135‑54 (MQ=255) aGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccac < 2:1524161‑M2/134‑54 (MQ=255) cTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcg < 2:1367022‑M2/125‑47 (MQ=255) gAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaa < 1:271881‑M2/135‑65 (MQ=255) gAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaa < 1:100105‑M2/135‑65 (MQ=255) atttcgcATGGCGACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCTAAGAAGCTTaacttctgtgttcgacatgg < 1:1502396‑M2/85‑21 (MQ=255) atttcgcATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCTAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcatcaccacactatgtgaaactaa < 2:1915828‑M2/133‑69 (MQ=255) atttcgcATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCTAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcatcaccacactatgtgaaactaa < 1:358470‑M2/133‑69 (MQ=255) gCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgc < 2:1783041‑M2/135‑73 (MQ=255) gCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgc < 1:656568‑M2/135‑73 (MQ=255) gCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgc < 1:1382901‑M2/135‑73 (MQ=255) gCATGGCAACGTCCTACCCTAGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcga < 2:2357610‑M2/78‑16 (MQ=255) gCATGGCAACGTCCTACCCTAGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcga > 1:2357610‑M2/1‑63 (MQ=255) cATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgc < 2:1463366‑M2/134‑73 (MQ=255) ggCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctca > 1:911192‑M2/1‑59 (MQ=255) cGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaact > 1:741338‑M2/1‑54 (MQ=255) ccTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactag < 1:1912045‑M2/135‑85 (MQ=255) ccTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactag < 2:1007674‑M2/135‑85 (MQ=255) tCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatc < 2:2455961‑M2/136‑93 (MQ=255) aGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctctaaactcgacaatatcaaat < 2:2823276‑M2/136‑97 (MQ=255) aGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaat < 1:1260253‑M2/136‑97 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 1:1847581‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 1:2620876‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 2:592254‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 2:1258200‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 2:2418746‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 2:2515132‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 1:1854314‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 1:2329285‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata < 1:382007‑M2/136‑98 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaact > 2:670518‑M2/1‑39 (MQ=255) gggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtca < 2:871697‑M2/88‑50 (MQ=255) ggAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgg > 1:582325‑M2/1‑38 (MQ=255) gAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaata > 2:3962‑M2/1‑37 (MQ=255) cGATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttc < 2:2123663‑M2/136‑103 (MQ=255) gATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttca < 1:1012870‑M2/136‑104 (MQ=255) gATCCCCCAACTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttca < 1:1993377‑M2/136‑104 (MQ=255) aaCTACTCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaacc > 2:1333130‑M2/1‑25 (MQ=255) ctactCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccgg < 2:2307549‑M2/136‑114 (MQ=255) actCTCGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcat < 2:1413958‑M2/125‑105 (MQ=255) ctcGGCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaaca < 2:563292‑M2/135‑118 (MQ=255) ggCGCCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactag < 1:1395656‑M2/99‑85 (MQ=255) gcgcCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaat < 2:2055486‑M2/136‑123 (MQ=255) gcgcCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaat < 2:797197‑M2/136‑123 (MQ=255) gcgcCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaat < 1:894148‑M2/136‑123 (MQ=255) cgcCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaat > 1:715794‑M2/1‑13 (MQ=255) gcCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaatt < 2:951314‑M2/135‑124 (MQ=255) gcCAAGAAGCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaatt < 1:1627295‑M2/135‑124 (MQ=255) aagaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattactt < 1:458781‑M2/136‑128 (MQ=255) aagaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattactt < 2:234263‑M2/136‑128 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:1416531‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:1472725‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:1151060‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 2:822826‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:1663780‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:1802784‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:1056467‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:1959562‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 2:1813358‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 1:670696‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 2:2508487‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 2:1205152‑M2/1‑8 (MQ=255) agaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttg > 2:1741212‑M2/1‑8 (MQ=255) gaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaat < 1:2480040‑M2/129‑123 (MQ=255) gaagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaact > 1:2251543‑M2/1‑7 (MQ=255) gaagCTTaacttctgtgttcgacatgggaacaggtgtatccgtctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatagcaaatatcttcatatgaaccggaacaccaattacttgg < 2:315462‑M2/136‑130 (MQ=255) aagCTTaacttctgtgttcgacatgggaacaggtgtatccttctcgccatcgtcaccacactattgagaaacttgtgctctcaaaactagacaatatcaaatatcttcatatgaaccggaacaccaattacttggt < 2:1768610‑M2/136‑131 (MQ=255) | GGCGGGCTCGAACCGTCGACATCTTGATTAACAGTCAAGCGCTCTACCAACTGAGCTATGTCGGAATAATCGCATGGCAACGTCCTACCCTCGCAGGGAGCGATCCCCCAACTACTCTCGGCGCCAAGAAGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_4/245737‑245870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |