| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_33 | = 1499 | 0 (0.000) | 127 (0.270) +GGTAGCGTCAAGAATCTTGTGTAAATGAAATGCCTTCGTACATATAATATGTATCTAACT |
34/140 | 0.2 | 100% | coding (585/585 nt) | rasttk_feature_annotation_tool=elepa@bvbrc | hypothetical protein |
| ? | TrimmedAssembly_T66_contig_36 | = 864 | 0 (0.000) | intergenic (+2/–) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2/– | Transposase/– | |||||
Only 100 of 1500 total aligned reads displayed.
AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 | aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 1:2483769/136‑1 (MQ=40)aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 2:2744904/136‑1 (MQ=40)aaGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCAtttattta < 2:1938226/136‑1 (MQ=40) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 2:782917‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1187187‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:2183806‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:2033041‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:1000716‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 2:2133431‑M2/136‑5 (MQ=255) aCAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 2:1835805‑M2/136‑5 (MQ=255) cAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtta > 1:354398‑M2/1‑131 (MQ=255) cAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtta > 1:2540221‑M2/1‑131 (MQ=255) aaTTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttag < 1:2645961‑M2/136‑7 (MQ=255) aTTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttaga > 1:2079653‑M2/1‑129 (MQ=255) ttCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagat < 1:464065‑M2/135‑9 (MQ=255) tCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGGTCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatac > 1:2355610‑M2/1‑126 (MQ=255) tCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatac > 2:368208‑M2/1‑126 (MQ=255) cAACGGAAGATTCACTGGAGCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacat > 2:1018130‑M2/1‑124 (MQ=255) ggATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaagg > 2:1679502‑M2/1‑108 (MQ=255) ggATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaagg > 2:2514645‑M2/1‑108 (MQ=255) aTCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggca < 2:630124‑M2/136‑31 (MQ=255) tCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcat < 1:503900‑M2/136‑32 (MQ=255) ttCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAATCGGATCCACCGAGGGTTCAAAGTACTCCAGGACACCTTGGAAGCATCATTTATATAagttagaaacataatatatgtacgaaggcatttca < 1:225902‑M2/136‑36 (MQ=255) tCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcat > 2:659174‑M2/1‑100 (MQ=255) ccTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttatatacatattatatttacgaaggcatttcatt < 1:1331723‑M2/136‑38 (MQ=255) cTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcattt < 1:308090‑M2/136‑39 (MQ=255) ggTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttac > 2:2595931‑M2/1‑96 (MQ=255) ggTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtt < 1:858718‑M2/100‑5 (MQ=255) tttCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttaca > 1:673796‑M2/1‑94 (MQ=255) ttCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacac > 2:237080‑M2/1‑93 (MQ=255) ttCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacac > 1:105460‑M2/1‑93 (MQ=255) cAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagat > 1:781484‑M2/1‑89 (MQ=255) cAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagat < 1:595279‑M2/136‑48 (MQ=255) cAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagat < 2:2046099‑M2/136‑48 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 2:1165415‑M2/1‑81 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 2:107671‑M2/1‑81 (MQ=255) tGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 1:1789515‑M2/1‑81 (MQ=255) taACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgcta < 2:1424883‑M2/133‑59 (MQ=255) aGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaag < 1:628356‑M1/134‑68 (MQ=255) aGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaag < 2:2645961‑M1/134‑68 (MQ=255) gTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaa > 1:1972660‑M1/1‑66 (MQ=255) gTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaat < 1:155447‑M2/133‑68 (MQ=255) ctctGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatact > 2:543902‑M2/1‑64 (MQ=255) tGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtc > 2:2291553‑M2/1‑61 (MQ=255) tGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtc > 1:229169‑M2/1‑61 (MQ=255) gAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtc < 1:2386807‑M2/135‑76 (MQ=255) aGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctg > 2:749897‑M1/1‑58 (MQ=255) aGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacaccc > 2:189463‑M2/1‑58 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 1:2812267‑M2/1‑55 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 1:1695686‑M2/1‑55 (MQ=255) ggATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattac > 2:2821056‑M2/1‑55 (MQ=255) aTCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacg > 2:834660‑M2/1‑53 (MQ=255) cACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttaggagcggttacgcagtga < 2:1796409‑M2/136‑87 (MQ=255) cACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcag < 2:967326‑M2/136‑87 (MQ=255) cGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaa > 1:1281189‑M2/1‑47 (MQ=255) gAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaat > 2:1576231‑M1/1‑46 (MQ=255) gAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaat < 2:1535025‑M2/136‑91 (MQ=255) tCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctagcgtgtaatactgtacacccatcaggttagagacatt > 2:1495116‑M2/1‑40 (MQ=255) aaaGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattata > 2:343391‑M2/1‑38 (MQ=255) aGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtga > 2:896753‑M2/1‑36 (MQ=255) aGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgacta < 2:402015‑M2/136‑101 (MQ=255) aGGACTCCAGGACACCTTGGAAGCATCATTTATTTAagtcagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgacta < 1:938601‑M2/136‑101 (MQ=255) aCTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaa > 2:12137‑M2/1‑33 (MQ=255) aCTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaag < 2:589864‑M1/134‑102 (MQ=255) cTCCAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatag > 2:2701418‑M2/1‑32 (MQ=255) ccAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatc > 1:2216021‑M2/1‑30 (MQ=255) cAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatc < 1:2754971‑M2/136‑108 (MQ=255) cAGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctct < 1:122840‑M2/136‑108 (MQ=255) aGGACCCCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagc > 2:1375542‑M1/1‑28 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatcttatatatacgaaggcatttcatttacacaatattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagc > 1:1619413‑M1/1‑28 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagatta < 2:2233331‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatca < 1:1490672‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgta < 2:464695‑M2/136‑109 (MQ=255) aGGACACCTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagc > 1:736937‑M1/1‑28 (MQ=255) acacCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattatt > 2:1610968‑M2/1‑25 (MQ=255) cacCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattca < 2:2094688‑M1/135‑112 (MQ=255) acCTTGGAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgc < 2:2428076‑M2/79‑57 (MQ=255) cTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattact > 1:1118875‑M2/1‑21 (MQ=255) cTTGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattact < 2:1118875‑M2/127‑107 (MQ=255) tGGAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgattgttaataacgtaataatatacaaaatatctgttcatattactgaagccaacaa > 1:2122513‑M2/1‑19 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattatt > 1:1847586‑M2/1‑18 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtg < 1:405578‑M2/133‑116 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtg < 2:172021‑M2/133‑116 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaat < 1:97658‑M2/135‑118 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaat < 1:1150884‑M2/135‑118 (MQ=255) ggAAGCATCATTTATTTAagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcat < 2:1264953‑M2/134‑117 (MQ=255) ggAAGCATCATTTATTTAagttagatacatataatatatacgaaggcatttcatttacacaagattcttgacgatacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcgggtagaa > 2:1761528‑M1/1‑18 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgg < 1:2441786‑M2/136‑121 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgg < 1:1650696‑M2/136‑121 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaag > 2:2194220‑M2/1‑16 (MQ=255) aaGCATCATTTATTTAagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccgatt > 1:2602781‑M1/1‑16 (MQ=255) catTTATTTAagatagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccaattaagtacaagctctgaatactcaaatccaacgtttaagctacaattcataaccgattacgttt < 1:1431712‑M1/136‑127 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagggtggtggcta < 2:1338317‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgttttttagaagcggttacgcatttatggtaatctagtgaatagattattagatagggtggtggcta < 1:2721945‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgcctcccgattagtcacatcattcagttctaacttatccaactcatcaacaagtgtctgggtatcgcc < 2:19940‑M2/136‑129 (MQ=255) tttatttaagttagatacatattatatgtacgaaggcatttcatttacacaagattcttgacgctaccgaaaagttcatcatcattactattagtatcaagttgactatcaacgtagtctgcaattcgctttgct < 2:2475663‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctacctgaaatcaaaaggtgtgggaaaaattattatatccgaagtcgtaaagcgcg > 1:1750108‑M1/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctagaaa > 2:698136‑M2/1‑8 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctagaa < 1:1898662‑M2/135‑128 (MQ=255) tttatttaagttagatacatattatatatacgaaggcatttcatttacacaagattcttgacgctaccgtgtaatactgtacacccatcaggttagagacattatacaatcctctaacactcattcttcctagaa < 2:301846‑M2/135‑128 (MQ=255) | AAGAACAATTTCCAACGGAAGATTCACTGGATCGCTTCCTGGTTTCTCAGTTTAATGTTTATAACGAGAAGTCTCTGAAGCGGATCCACCGAGGGTTCAAAGGACTCCAGGACACCTTGGAAGCATCATTTATTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > TrimmedAssembly_T66_contig_36/729‑864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |