| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | TrimmedAssembly_T66_contig_1 | 1 = | 0 (0.000) | 216 (0.700) | 72/260 | 0.1 | 100% | intergenic (–/‑2) | –/rasttk_feature_annotation_tool=elepa@bvbrc | –/hypothetical protein |
| ? | TrimmedAssembly_T66_contig_35 | 1 = | 0 (0.000) | intergenic (–/‑99) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Mobile element protein | |||||
Only 100 of 490 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAACGTGAAA > TrimmedAssembly_T66_contig_35/1‑136 | taatgcagctaataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGc > 2:1651345‑M2/134‑136 (MQ=255) ttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACaa < 1:1050215‑M2/13‑1 (MQ=255) ttcgattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACaa < 1:2258546‑M2/13‑1 (MQ=255) ataatcactttcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAAt > 1:1343384‑M2/123‑136 (MQ=255) gattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGa > 2:194323‑M2/120‑136 (MQ=255) gattaagtccaatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGa > 2:560170‑M2/120‑136 (MQ=255) tcattcatagactcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCa > 2:2641491‑M2/113‑135 (MQ=255) caatgcgtccaagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAaca < 1:1720169‑M2/26‑1 (MQ=255) tagactcccccaagtctgatgaatggggttcatcaacgcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAg < 2:1584299‑M2/31‑1 (MQ=255) gtccaagatacggcctgccggaatgaaagattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGt > 1:554604‑M2/105‑136 (MQ=255) tcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa < 1:45482‑M2/36‑1 (MQ=255) tcccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa < 2:1315628‑M2/36‑1 (MQ=255) aagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACaa < 1:414672‑M2/13‑1 (MQ=255) aagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa > 1:1366594‑M2/101‑136 (MQ=255) aagatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa > 1:2449912‑M2/101‑136 (MQ=255) cccccaagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaa > 1:107766‑M2/100‑136 (MQ=255) agatacggcctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaa > 2:224998‑M2/100‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 1:1848826‑M2/96‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 1:1265160‑M2/96‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 1:1470964‑M2/96‑136 (MQ=255) caagtctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATa > 2:2833895‑M2/96‑136 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAaca < 2:148174‑M2/26‑1 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 1:1163555‑M2/46‑1 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc > 2:821847‑M2/91‑136 (MQ=255) ctgccggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc > 2:1338036‑M2/91‑136 (MQ=255) ctgatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAAccc < 2:85840‑M2/46‑1 (MQ=255) gatgaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCAt < 1:2285044‑M2/48‑1 (MQ=255) ggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc < 2:178826‑M2/51‑1 (MQ=255) ggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 1:1518769‑M2/86‑136 (MQ=255) ggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 2:2350652‑M2/86‑136 (MQ=255) ggaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc < 1:100212‑M2/51‑1 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTaaaaa > 2:895813‑M2/86‑122 (MQ=255) gaatggggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATAcc > 2:2158031‑M2/86‑136 (MQ=255) gaatgaacgattccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCg > 1:304155‑M2/85‑136 (MQ=255) ggttcatcaaagcccccactttgttgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAg > 2:2087233‑M2/80‑136 (MQ=255) ggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAg > 1:2063128‑M2/80‑136 (MQ=255) ggttcatcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAg > 1:2559103‑M2/80‑136 (MQ=255) ttccgtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAatat > 1:2662908‑M2/75‑136 (MQ=255) atcaaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAATAAAATAAACCCATACCGGGTAGAatat > 2:1745475‑M2/75‑136 (MQ=255) aaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGtt > 2:1218020‑M2/72‑136 (MQ=255) aaagcccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGtt > 2:2101907‑M2/72‑136 (MQ=255) gtgaaggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGttt > 1:792240‑M2/71‑136 (MQ=255) ccccactttgatgtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTaa < 2:1071619‑M2/68‑1 (MQ=255) aggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACg > 1:1399920‑M2/67‑136 (MQ=255) aggtctgctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACg > 2:1541829‑M2/67‑136 (MQ=255) ctttttaccatcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCaaa > 2:117997‑M2/60‑135 (MQ=255) gtttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAAc > 1:687775‑M2/55‑136 (MQ=255) tttcctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAAAAAACCCATACCGGGTAGAAAATGTTTAACGACCAAATCAAACa > 2:2737354‑M2/54‑136 (MQ=255) catcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAaca > 1:1299898‑M2/52‑77 (MQ=255) cctactccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAAtt < 2:1613765‑M2/86‑1 (MQ=255) atcaataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAAt > 2:2171115‑M2/51‑135 (MQ=255) actccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGACTTTACAATTGACATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGa > 2:2475222‑M2/48‑136 (MQ=255) ataagtaattccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAg > 2:308122‑M2/47‑136 (MQ=255) tccttgaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAgg < 2:1462811‑M2/91‑1 (MQ=255) taccaatacatcctcttatgtggtggcttttttattgacgTGCGAATTTAATATTTAAATGCAACACAAAGTAAAAAAATAAACCAATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATcc < 1:851632‑M2/96‑1 (MQ=255) gaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATc < 2:241511‑M2/78‑1 (MQ=255) gaccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATc > 1:241511‑M2/41‑118 (MQ=255) ttccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:2531103‑M2/98‑1 (MQ=255) ttccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:1200451‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACACAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAACTCAACCAATTCGAGGTATCCgg < 2:636829‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAATAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCcgt < 1:145854‑M2/98‑2 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:705896‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:826645‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg > 1:2162597‑M2/39‑136 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:1647591‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 1:1602094‑M2/98‑1 (MQ=255) ccactacatccgctgatgtggtggcatttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:2553518‑M2/98‑1 (MQ=255) tccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGt < 2:594718‑M2/99‑1 (MQ=255) tccatctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGt < 1:2463856‑M2/99‑1 (MQ=255) cactacatccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGt > 1:73346‑M2/38‑136 (MQ=255) catctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTAt < 2:1366594‑M2/101‑1 (MQ=255) catctttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTAt > 1:2780877‑M2/36‑136 (MQ=255) catccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGa > 1:2523069‑M2/33‑135 (MQ=255) ttagtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCt > 2:940286‑M2/31‑136 (MQ=255) tccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCt > 2:734758‑M2/31‑136 (MQ=255) tccgctgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCt > 1:2357188‑M2/31‑136 (MQ=255) agtggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCtat < 2:2797290‑M2/108‑1 (MQ=255) tgatgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATaa > 2:1255421‑M2/26‑135 (MQ=255) ggtgtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATaaa < 2:409266‑M2/111‑1 (MQ=255) tgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 1:955650‑M2/113‑1 (MQ=255) tgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 2:1006780‑M2/113‑1 (MQ=255) tgtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 2:1105095‑M2/113‑1 (MQ=255) gtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTaaaa < 1:1679335‑M2/36‑1 (MQ=255) gtactcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACa < 1:1983684‑M2/113‑1 (MQ=255) gtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCgg < 2:2284‑M2/98‑1 (MQ=255) gtggtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATc < 1:596888‑M2/115‑1 (MQ=255) tcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCtt > 2:1692339‑M2/19‑135 (MQ=255) tcatagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCtt > 2:515817‑M2/19‑135 (MQ=255) gtggcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCtt > 2:470851‑M2/19‑135 (MQ=255) atagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACt > 1:616116‑M2/17‑136 (MQ=255) tagttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACta < 1:2133939‑M2/121‑1 (MQ=255) gcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACta > 2:382531‑M2/16‑136 (MQ=255) gcttttttattgccgGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTAGAGGTATAAGGTATGAGCTATAAACATCTAACta > 2:2767204‑M2/16‑136 (MQ=255) gttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTa < 2:2216941‑M2/100‑1 (MQ=255) gttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACtata > 1:39302‑M2/14‑136 (MQ=255) gttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACtata > 1:2220822‑M2/14‑136 (MQ=255) gttttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACtata > 2:1880220‑M2/14‑136 (MQ=255) tttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa < 1:2043239‑M2/125‑1 (MQ=255) tttttccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATaaa > 1:1915929‑M2/12‑136 (MQ=255) ccctccGGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAAc < 2:2031969‑M2/130‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTTACAATTGAAATGCAACACAAAGTAAAAAAATAAACCCATACCGGGTAGAATATGTTTAACGACCAAATCAAACAATTCGAGGTATCCGGTATGAGCTATAAACATCTTACTATAAAAGAACGTGAAA > TrimmedAssembly_T66_contig_35/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |