| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_11 | 1 = | 0 (0.000) | 1980 (1.590) +C |
136/258 | 0.0 | 100.0% | intergenic (–/‑74) | –/rasttk_feature_creation_tool=RNA_reps_SSU_rRNA | –/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA |
| ? | Annotation_U21_Trimmed_contig_3 | 2 = | 1 (0.000) | intergenic (–/+370) | –/rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | –/Integral membrane protein LafC, accessory function in glycolipid and LTA synthesis | |||||
Only 100 of 2007 total aligned reads displayed.
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACA > Annotation_U21_Trimmed_contig_11/1‑133 | gatctcgatgatatagttaaatagttgtcaaaagcgctaacagcgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTaa > 1:2065371‑M1/123‑135 (MQ=255) taaatagttgtcaaaagcgctaacaacgttgatatgacaacaatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGaa < 2:353427‑M1/29‑1 (MQ=255) aatagttgtcaaaagcgctaacagcgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagtgtcttacaaatctCAAGATTATGTAAGAAAACATTAAGCGaagac < 2:1002799‑M1/32‑3 (MQ=255) aatagttgtcaaaagcgctaacagcgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTc < 1:1262715‑M1/32‑1 (MQ=255) aatagttgtcaaaagcgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTc < 2:2256614‑M1/32‑1 (MQ=255) agttgttaaaaacgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCaa < 2:1288428‑M1/34‑1 (MQ=255) agttgttaaaaacgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCaa < 2:2037367‑M1/34‑1 (MQ=255) agttgttaaaaacgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttaaaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCaa < 2:242178‑M1/34‑1 (MQ=255) gttaaaaacgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCg < 2:1505799‑M1/38‑1 (MQ=255) tcaaaagcgctaacagcgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCa < 1:192759‑M1/40‑1 (MQ=255) aaaagcgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCaaa > 2:2456735‑M1/94‑135 (MQ=255) aaaagcgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCaaa > 1:203887‑M1/94‑135 (MQ=255) aaaagcgctaacaacgttgatatgacaacaatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGAtt < 1:524316‑M1/7‑1 (MQ=255) aaaagcgctaacaacgttgatatgacaacaatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATAATGCGAAGTCAATTCGCaa < 2:2662415‑M1/41‑1 (MQ=255) aaaaacgctaacaacgttgatctgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcactagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCaaa > 2:2138704‑M1/94‑135 (MQ=255) aaaaacgctaacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCaaa > 1:2252849‑M1/94‑135 (MQ=255) aaaaacgataacaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCaaa > 1:2657922‑M1/94‑135 (MQ=255) acaacgttgatatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAAtt > 1:2467146‑M1/84‑135 (MQ=255) atatgacaacgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCtt < 1:1992549‑M1/61‑1 (MQ=255) acgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATTAGCTTGaaaaa < 2:1761992‑M1/67‑1 (MQ=255) acgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTgaaaaaa < 2:578279‑M1/68‑2 (MQ=255) acgatagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGaaaaa < 1:1525511‑M1/67‑1 (MQ=255) tagtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttactaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACtca > 1:960585‑M1/63‑135 (MQ=255) agtagacctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACtca > 1:303743‑M1/62‑135 (MQ=255) acctttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCAttt < 1:2746917‑M1/79‑1 (MQ=255) tttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAat > 2:1672919‑M1/54‑135 (MQ=255) tttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAat > 1:1196300‑M1/54‑135 (MQ=255) tttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAat > 2:676065‑M1/54‑135 (MQ=255) ttgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAata > 1:1563702‑M1/53‑135 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCa > 2:1152570‑M1/52‑53 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAata < 1:261764‑M1/84‑1 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAatat < 1:2134717‑M1/84‑1 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAatat < 1:2570061‑M1/84‑1 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAatat < 1:1806450‑M1/84‑1 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAatat < 2:1964982‑M1/84‑1 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGaa > 2:2349001‑M1/52‑67 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAatat < 2:304976‑M1/84‑1 (MQ=255) tgaaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAatat < 1:2515959‑M1/84‑1 (MQ=255) aaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAATATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATTAGCTTTAAAAA‑ATACTCATCATTTAAAATg < 2:634334‑M1/86‑1 (MQ=255) aaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATTAGCTTGAAAAAAG‑ACTCATCATTTaatatt < 2:530697‑M1/86‑2 (MQ=255) aaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATga < 1:187369‑M1/86‑1 (MQ=255) aaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATga < 2:1184690‑M1/86‑1 (MQ=255) aaaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATga < 2:377307‑M1/86‑1 (MQ=255) aaactgaacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATgag < 1:1721913‑M1/87‑1 (MQ=255) aacaaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTg < 2:1600051‑M1/93‑1 (MQ=255) acaaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCaaa < 2:725165‑M1/42‑1 (MQ=255) caaaattttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGa > 1:580973‑M1/41‑135 (MQ=255) aaaattttgacaatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATc < 2:2607452‑M1/96‑1 (MQ=255) attttgacaatcactagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATAATGCGAAGTCAATTAGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGAtctgg > 2:2698335‑M1/37‑133 (MQ=255) attttgacaatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTg > 1:221457‑M1/37‑135 (MQ=255) atgttgacaatcaatagtgtcgggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTg > 1:1095683‑M1/37‑135 (MQ=255) aatttgacaatcaatattttagtgtcttacaaatcgCAAGATTATGTAATAAAAAATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTg > 2:2086521‑M1/37‑135 (MQ=255) aatctattgtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAACCACACAATTAATGTGATTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAgg > 1:1000254‑M1/29‑134 (MQ=255) aatcaatagtgtagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACACTTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAgg > 2:440093‑M1/29‑135 (MQ=255) aatcaatagtgtagggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGATCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAgg > 1:2424397‑M1/29‑134 (MQ=255) tatggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTg > 2:2503183‑M1/18‑133 (MQ=255) tagggtcttacaaatcgCAAGATTATTTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggc > 1:787638‑M1/18‑135 (MQ=255) tagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTgg > 2:1886881‑M1/18‑135 (MQ=255) tagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggc > 1:231222‑M1/18‑135 (MQ=255) tagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggc > 2:1107248‑M1/18‑135 (MQ=255) tagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggc > 1:476891‑M1/18‑135 (MQ=255) tagggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggc > 1:635709‑M1/18‑135 (MQ=255) gggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggc > 2:1722289‑M1/16‑134 (MQ=255) gggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggc > 2:933086‑M1/16‑134 (MQ=255) ggtcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggcgg < 1:90322‑M1/121‑1 (MQ=255) ggtcttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggcggc < 1:695918‑M1/121‑1 (MQ=255) tcttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTggcggc > 1:434534‑M1/13‑133 (MQ=255) cttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCt < 1:848412‑M1/98‑1 (MQ=255) cttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGgcggcg > 2:880068‑M1/12‑134 (MQ=255) cttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGgcggcg > 1:738239‑M1/12‑134 (MQ=255) cttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGgcggcg < 1:332797‑M1/123‑1 (MQ=255) cttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGgaggcg < 2:1230058‑M1/123‑1 (MQ=255) cttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGt < 2:835578‑M1/123‑1 (MQ=255) cttacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGt < 1:137459‑M1/123‑1 (MQ=255) cttacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGt < 1:2371135‑M1/123‑1 (MQ=255) tacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAaaacaa < 2:1332492‑M1/46‑1 (MQ=255) tacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGt < 1:1616283‑M1/124‑1 (MQ=255) tacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGcc < 2:1548855‑M1/126‑1 (MQ=255) tacaaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGcc < 2:2306912‑M1/126‑1 (MQ=255) tacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGcc < 1:1047342‑M1/126‑1 (MQ=255) tacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGcc > 1:389349‑M1/10‑135 (MQ=255) tacaaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGcc < 2:1044797‑M1/126‑1 (MQ=255) caaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCt < 1:1310733‑M1/128‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGaa > 1:270590‑M1/7‑118 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTa < 1:1481391‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATAATTTAATATGAGAGTTTTATCTTGGCTCAGGATGAACGATGGCGGCGTGCCTa < 2:1819684‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGTACGCTGGCGGCGTGCCTaa < 2:238410‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGgcggcg < 2:486078‑M1/122‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 2:2558692‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 2:78530‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 1:1152323‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 1:1761040‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 2:2748001‑M1/129‑1 (MQ=255) aaatcgCAAGATTATGTAAGAAAAAATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGTAAAA‑G‑ACTCATCCTTTAATATGAGAGGTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 1:2174043‑M1/129‑1 (MQ=255) aaatcgCAAGATTACGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAAAG‑ACTCATCATTTAATATGAGAGTTTGATCTTGTCTCAGGATGAACTCTGGCGGCGTGCCTa < 2:147228‑M1/129‑1 (MQ=255) aaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGATCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTgg < 2:1426392‑M1/117‑1 (MQ=255) aaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTgg > 1:1426392‑M1/7‑123 (MQ=255) aaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 1:1664857‑M1/129‑1 (MQ=255) aaatcaCAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTaa < 2:1384385‑M1/129‑1 (MQ=255) tcacAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATAc < 2:2196838/132‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGATTATGTAAGAAAACATTATGCGAAGTCAATTCGCAAAACAAACAATTAATGAGCTTGAAAAA‑G‑ACTCATCATTTAATATGAGAGTTTGATCTTGGCTCAGGATGAACGCTGGCGGCGTGCCTAATACA > Annotation_U21_Trimmed_contig_11/1‑133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |