| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_13 | 1 = | 0 (0.000) | 196 (0.570) | 52/258 | 1.4 | 59.0% | intergenic (–/‑4) | –/rasttk_feature_creation_tool=tRNAscan‑SE | –/tRNA‑Phe‑GAA |
| ? | Annotation_U21_Trimmed_contig_8 | 48167 = | 273 (0.860) | intergenic (‑22/+1) | rasttk_feature_creation_tool=tRNAscan‑SE/rasttk_feature_creation_tool=tRNAscan‑SE | tRNA‑Phe‑GAA/tRNA‑Asp‑GTC | |||||
Only 100 of 196 total aligned reads displayed.
AAGGCTGTGGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Annotation_U21_Trimmed_contig_13/134‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAAAG > Annotation_U21_Trimmed_contig_8/48167‑48245 AAGGCTGTGGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTA > 1:112033/1‑135 GGCTGTGGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACG < 1:10720/135‑1 TGGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 2:683081/1‑135 GGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCTCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTAACGACTGAGCTACCGAGCCATTTACGGTCCT > 1:1207535/1‑134 GGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 2:1896084/1‑134 GGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 2:1901447/1‑134 GGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 2:1956840/1‑134 GGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 1:2230792/1‑134 GGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 2:513707/1‑134 GGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 1:1835844/1‑134 GTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTA < 2:1548264/134‑1 GTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTA < 1:2092773/134‑1 CCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGAC < 1:193050/135‑1 ACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACATAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTC > 2:2889945/1‑135 CTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCG < 2:1054770/135‑1 CTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCG < 2:2616103/135‑1 CTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCG < 1:153447/135‑1 CTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCG < 2:1718909/135‑1 AAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAA < 2:166611/135‑1 ACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCACTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACT > 1:233186/1‑135 CCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGAT > 2:1220990/1‑134 CCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGAT > 1:778750/1‑134 CCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGAT > 1:2450522/1‑134 CCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGT < 2:2212393/131‑1 CGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACTGTCCTAACGAGACTCGAACTCGTGATCT < 2:2661646/135‑1 CGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCT < 1:2363590/135‑1 CATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATC > 2:1159987/1‑132 AATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGC > 1:573436/1‑135 AATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGC > 1:284631/1‑135 ATTTAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCTATCCATTGCTCTACCGACTGAGCTTCCGAGCCATTTTCGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 1:217627/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 1:524586/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 1:309609/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 2:2802162/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 2:1726694/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 1:2603154/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 2:2446619/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 1:1421966/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 2:2539454/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 2:2704023/134‑1 ATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 2:1230818/134‑1 TTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCA > 2:2046486/1‑135 TAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCA > 2:1339346/1‑134 AAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGG < 2:623290/135‑1 AATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGC > 2:2268563/1‑135 AATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGC > 1:1413461/1‑135 AATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATAGCTCTACCGACTGAGCTACCGAGCCAATTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGC > 2:1936911/1‑135 GTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCC < 2:956507/135‑1 GTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCC < 1:702276/135‑1 GTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCC < 2:2379435/135‑1 GTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCC < 2:840590/135‑1 AATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTA < 1:2609198/134‑1 ATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAAC > 1:268824/1‑135 ATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAAC > 1:2546142/1‑135 ATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAAC > 2:2784312/1‑135 ATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAAC > 1:1860061/1‑135 ATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAAC > 2:158391/1‑135 TGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCACTCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACC < 2:1143772/135‑1 TGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACC < 1:2809398/135‑1 TGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAAC < 2:573436/134‑1 GGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACC > 2:2084585/1‑134 GGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACC > 1:365021/1‑134 GCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 1:1956777/135‑1 GCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 2:2230792/135‑1 GCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 2:112033/135‑1 GCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 1:929193/135‑1 GCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 1:132208/135‑1 GCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 2:469588/135‑1 GCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 2:2007277/135‑1 CGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTAGAACTAGTGATCTCCAGCGTGACAGGCAGGCGTCCTAACCAGCT < 1:2592094/134‑1 GGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACTAGACTCGAACTCGTGATCTCCAGCGTGACAGGCAGGCGTCCTAACCAGCTA > 2:884322/1‑134 GGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT > 1:1358298/1‑79 GGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCT < 2:1358298/79‑1 GGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGA < 1:2043786/135‑1 GACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGAC > 1:1634923/1‑135 ACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGAC < 1:2575940/134‑1 AGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCAT > 2:554928/1‑135 AGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCAT > 2:825293/1‑135 TCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCA < 1:1484843/130‑1 TCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCA < 2:715444/130‑1 TCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCA < 1:1083511/130‑1 TCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCA < 2:1835844/130‑1 CGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGAC > 1:2215960/1‑135 CGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGAC > 1:277524/1‑135 CGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGAC > 1:299127/1‑135 CGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGAC > 2:535854/1‑135 CGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGAC > 1:560444/1‑135 CGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGATACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGAGACAGGCAGGCGTCATAACCAGCTAGACCATAGGAC > 1:1980203/1‑135 CTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAG < 1:2635726/117‑1 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAtaa > 1:1956921/1‑132 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAtaa > 2:1411795/1‑132 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAtaa > 1:1162264/1‑132 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAtaa > 2:308630/1‑132 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAtaa > 2:1584420/1‑132 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAtaa > 2:1788961/1‑132 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAtaa > 1:964564/1‑132 TGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGAC > 2:1493023/1‑122 ACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG > 1:17223/1‑95 TCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG < 2:2353436/79‑1 TCCATTGCTCTACCGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGG > 1:2353436/1‑79 CGACTGAGCTACCGAGCCATTTACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTC < 2:1867456/74‑1 AAGGCTGTGGTTTTACCACTAAACTACACCCGCATAATAAAGGTATTAAATTGTGAATGGCGCGGGACAGAATCGAACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCGACTGAGCTACCGAGCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Annotation_U21_Trimmed_contig_13/134‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGGTCCTAACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTAACCAGCTAGACCATAGGACCAAAG > Annotation_U21_Trimmed_contig_8/48167‑48245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |