| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_2 | = 373842 | 493 (1.020) | 441 (1.170) +ATCGGATAGCCGTTCAGCTTCGACTTCA |
60/202 | 1.2 | 53.6% | coding (3215/5343 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Predicted cell‑wall‑anchored protein SasA (LPXTG motif) |
| ? | Annotation_U21_Trimmed_contig_2 | 374858 = | 485 (1.000) | coding (4231/5343 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Predicted cell‑wall‑anchored protein SasA (LPXTG motif) | |||||
Only 100 of 938 total aligned reads displayed.
CGAACTCGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGCCGCTCAGCTTCGACTTCAGTTTCTGATTCG > Annotation_U21_Trimmed_contig_2/374724‑374989 | cagtatctgattcaacttcagatagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcag < 1:24921‑M2/1‑1 (MQ=255) cTCGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGt > 1:1299911/1‑132 (MQ=255) ctgattcaacttcagatagtgcttcaactagtcaatcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTg < 1:1632362‑M2/7‑1 (MQ=255) ctgattcaacttcagatagtgcttcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTg < 1:2587632‑M2/7‑1 (MQ=255) ctgattcaacttcagatagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTg < 1:2134974‑M2/7‑1 (MQ=255) ctgattcaacttcagatagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTg < 2:1961421‑M2/7‑1 (MQ=255) cGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTg < 1:2867355/135‑1 (MQ=255) cGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTg < 1:2264242/135‑1 (MQ=255) cGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTg < 2:1754142/135‑1 (MQ=255) cGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTg < 1:1564048/135‑1 (MQ=255) cGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTg < 2:234953/135‑1 (MQ=255) cGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTg < 2:2751152/135‑1 (MQ=255) tgattcaacttcagatagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGa < 2:868787‑M2/8‑1 (MQ=255) gATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGAt < 2:2241316/135‑1 (MQ=255) ttCAATTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTAAAACTTCGACCTCTGTATCCAATACGATTTCAGAAAGTAACACGAAGAGAACATCGGACAGTCGTTCGACATCAACATCAGTATCTGATTc > 2:2149909/1‑135 (MQ=37) tcaacttcagatagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTc < 1:2350970‑M2/11‑1 (MQ=255) tCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCa < 1:2515615/135‑1 (MQ=255) cagatagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAg > 1:1543333‑M2/117‑135 (MQ=255) cGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTc < 1:985100/133‑1 (MQ=255) atagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATa > 2:771542‑M2/114‑135 (MQ=255) tagtgcgtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTg < 1:1946057‑M2/7‑1 (MQ=255) gtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTc > 1:1508087‑M2/107‑135 (MQ=255) gtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTc > 2:2802960‑M2/107‑135 (MQ=255) gtcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTc > 2:50031‑M2/107‑135 (MQ=255) tcaacgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGtca < 1:745966‑M2/30‑2 (MQ=255) gacaagtcattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaac < 1:618976‑M2/32‑1 (MQ=255) actagtcattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacttcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg < 1:685026‑M2/33‑1 (MQ=255) acgagtcactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg > 1:1068439‑M2/103‑135 (MQ=255) acaagtcattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg < 2:1388544‑M2/33‑1 (MQ=255) acaagtcattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg < 2:1478011‑M2/33‑1 (MQ=255) caagtcattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTc > 2:2010881‑M2/102‑118 (MQ=255) gtcattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg > 2:1706182‑M2/99‑131 (MQ=255) gCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACGTCAACATCTGTATATTAATAAACTTAAGATATTTCATAGTCGAGTc > 1:1594085/1‑135 (MQ=25) cattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCa > 2:1602784‑M2/97‑134 (MQ=255) cattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCa > 2:340248‑M2/97‑134 (MQ=255) cattcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCa > 1:2061255‑M2/97‑134 (MQ=255) cattcaacatctgattcagtatcaacatcgaagtcagattcaagttcaaagagtgattcagtaagtacatcggaaagccgttcagcttcgacttcaGTATCTGATTCAACTTCa > 2:251292‑M2/97‑114 (MQ=255) cactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg > 2:2633478‑M2/97‑129 (MQ=255) cactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg < 1:2633478‑M2/33‑1 (MQ=255) cactcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCa > 2:1430559‑M2/97‑134 (MQ=255) attcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTcac < 2:547665‑M2/39‑2 (MQ=255) attcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTcac < 1:908375‑M2/39‑2 (MQ=255) actcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTcac < 1:559878‑M2/39‑2 (MQ=255) ttcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTc > 1:1009163‑M2/95‑131 (MQ=255) tctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACAtct < 2:2180154‑M2/48‑2 (MQ=255) gTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCgg > 1:405203/1‑135 (MQ=255) tgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGa < 2:1330260‑M2/50‑1 (MQ=255) tgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGa < 2:1086125‑M2/50‑1 (MQ=255) tgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGa < 1:2442774‑M2/50‑1 (MQ=255) gTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCgg < 1:354219/132‑1 (MQ=255) gTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGAtt > 1:438810/1‑135 (MQ=255) gTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGAt < 2:1725831/134‑1 (MQ=255) gTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAAATTCAGATATTGCATCGACGAGTCATTCGACATCGGAtt > 1:2786041/1‑135 (MQ=255) tCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCa > 2:2112529/1‑135 (MQ=255) tCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCa > 1:189032/1‑135 (MQ=255) cagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg < 2:1658664‑M2/33‑1 (MQ=255) cagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTcac > 2:658075‑M2/81‑118 (MQ=255) cagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAg > 1:2394815‑M2/81‑135 (MQ=255) cagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAg < 2:1138325‑M2/55‑1 (MQ=255) cagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAg > 2:2869323‑M2/81‑135 (MQ=255) aaCTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTg < 2:1038016/86‑1 (MQ=255) aaCTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTc < 1:1848707/96‑1 (MQ=255) aaCTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGt > 2:2834806/1‑135 (MQ=255) aCTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTa < 1:1218087/135‑1 (MQ=255) atcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg > 1:833136‑M2/77‑109 (MQ=255) atcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTcaacg > 2:383447‑M2/77‑109 (MQ=255) atcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAGt > 2:585489‑M2/77‑132 (MQ=255) atcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAGTATc > 2:1931941‑M2/77‑135 (MQ=255) tcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAGTa < 2:1514402‑M2/57‑1 (MQ=255) tcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAGTATc > 1:1988018‑M2/76‑134 (MQ=255) caacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAGTatcaa > 1:293678‑M2/75‑133 (MQ=255) caacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAGTatcaa > 1:483497‑M2/75‑133 (MQ=255) aacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCAACATCTGATTCAGTATCAAc < 2:904875‑M2/62‑1 (MQ=255) aCCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGAc > 1:1157590/1‑134 (MQ=255) aCCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACa < 1:877916/135‑1 (MQ=255) ccAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACtcag < 1:2178213/135‑1 (MQ=255) aaTTCGAGTTCAGATAGTAAATCGAAGAGCAAATGGGTCTGTCGTTCGACTTCATCATCTGTATCTGTTTAAACTTCAGATAGTGCTTCTACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACtcagat < 1:1767266/135‑1 (MQ=18) gATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACtcagattcaga > 1:1439942/1‑135 (MQ=255) aTTTCATATAGTCAATCTAATAGTAAATAGGACAGTCGTTCGACTTCTACCTCTGTATCTGATTCAACTTCAGATAGTGCATCTACGAGTCATTCGAAATCGGATTCAGTATCGACATCAAACtcagattcagat < 2:1835164/135‑1 (MQ=17) aTTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACtcagattcagat < 2:438810/135‑1 (MQ=255) aTTACAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACCTCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACtcagattcagat < 2:742152/135‑1 (MQ=255) ttCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCagattcagattc < 1:2023844/135‑1 (MQ=255) ttCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCagattcagattc < 2:2551661/135‑1 (MQ=255) ttCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCagattcagattc < 2:2418896/135‑1 (MQ=255) ttCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCagactcagattc < 1:2739565/135‑1 (MQ=255) ttCAGATACTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCagattcagattc < 1:1035986/135‑1 (MQ=255) cAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGa < 2:2305380/135‑1 (MQ=255) cAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGa < 2:973565/135‑1 (MQ=255) aGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAaga < 2:2891777/133‑1 (MQ=255) aGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAaga < 2:1886844/133‑1 (MQ=255) gtacatcggatagccgttcagcttcgacttcaGTATCTGATTCAACTTc > 1:1661167‑M2/33‑49 (MQ=255) tACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGc < 2:1226531/133‑1 (MQ=255) aCATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGcagg > 2:2699183/1‑132 (MQ=255) cgttcagcttcgacttcaGTATCTGATTCAACTTCAGATAGTgcg < 2:409871‑M2/27‑2 (MQ=255) cGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGCCGCTCAGCTTCGAc > 2:2063757/1‑134 (MQ=255) ttCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGCCGCTCAGCTTCGACTTc < 1:2240877/135‑1 (MQ=255) ttCGACTTCAACATCTGTATCTGAGTCAACTTCAGATAGTGCATCGACGAGTCAATCGACATCGGATTCAGTATCGACATCAAAATCAGATACAGACTCCAAGAGTACATCAGAGAGAAGCTCAGCTTCGACATc > 2:800150/1‑135 (MQ=18) gACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGCCGCTCAGCTTCGACTTCAGt > 1:170010/1‑135 (MQ=255) cTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGCCGCTCAGCTTCGACTTCAGt > 1:1376059/1‑133 (MQ=255) aCATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGCCGCTCAGCTTCGACTTCAGTTTCTGa > 2:2449084/1‑134 (MQ=255) | CGAACTCGGATTCAAGTTCGAAGAGTGATTCCAAGAGCACATCAGACAGTCGTTCAACTTCGACCTCTGTCTCCAATTCGATTTCAGATAGTAACTCGAAGAGTACATCGGACAGTCGTTCGACTTCAACATCTGTATCTGATTCAACTTCAGATAGTGCATCGACGAGTCATTCGACATCGGATTCAGTATCGACATCAAACTCAGATTCAGATTCGAAGAGTACATCAGACAGCCGCTCAGCTTCGACTTCAGTTTCTGATTCG > Annotation_U21_Trimmed_contig_2/374724‑374989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |