New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Annotation_U21_Trimmed_contig_10 1 =0 (0.000)337 (0.310) 96/256 0.0 100% noncoding (117/117 nt) rasttk_feature_creation_tool=RNA_reps_5S_rRNA 5S rRNA # 5S ribosomal RNA ‑ 3 prime truncation
?Annotation_U21_Trimmed_contig_12 = 1004 0 (0.000)intergenic (‑5/–) rasttk_feature_creation_tool=tRNAscan‑SE/– tRNA‑Val‑TAC/–

Only 100 of 337 total aligned reads displayed.

CGTAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Annotation_U21_Trimmed_contig_10/134‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  Annotation_U21_Trimmed_contig_12/1004‑871
                                                                                                                                                                                                                                                                            
      TTAGCACAGAGTGTGGTGACGATAGTGAGAAGGTTATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTTGTTGGGGGATCGCCCCCTGCGTGGGTAGGACGTTGCCATGATAAA                                                                                                                                    <  2:2152418/132‑1
             AGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATT                                                                                                                           >  2:426347/1‑134
             AGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATT                                                                                                                           >  2:1703357/1‑134
                 TGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAG                                                                                                                         <  1:1254544/132‑1
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  2:123121/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  2:1383114/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  2:1725235/1‑135
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATT                                                                                                                           <  2:2265098/129‑1
                  GTGGTGACGATAGTGAGAAGGATATACCTGTTCCCAAGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTAGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCA                                                                                                                     >  1:128270/1‑135
                   TGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTC                                                                                                                      <  1:228271/133‑1
                    GGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGT                                                                                                                   >  2:157431/1‑135
                      TGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGTGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTG                                                                                                                 >  1:1983240/1‑135
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTG                                                                                                                 <  1:1019796/134‑1
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTG                                                                                                                 <  2:1260457/134‑1
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTG                                                                                                                 <  2:1549502/134‑1
                       GACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTG                                                                                                                 <  2:1768292/134‑1
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGtg                                                                                                           >  2:695032/1‑133
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  2:2203954/1‑135
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  1:1608174/1‑135
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  2:204994/1‑135
                            TAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  2:2445410/1‑135
                             AGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGC                                                                                                          <  1:149150/135‑1
                             AGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGC                                                                                                          <  1:519955/135‑1
                             AGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           <  2:2487820/134‑1
                                 AGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCT                                                                                                      <  1:1390886/135‑1
                                         ATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACA                                                                                              >  1:2400317/1‑135
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  2:1093852/135‑1
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  1:1872773/135‑1
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  1:376986/135‑1
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            <  1:433891/135‑1
                                           ACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAG                                                                                            >  2:1061734/1‑135
                                                   ctATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    <  1:1530891/133‑1
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:307198/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:775230/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:497496/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  2:1045366/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:874905/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  2:2377084/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:2528446/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  2:904549/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  2:2493208/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:2193224/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTAC                                                                                               >  2:1278437/1‑124
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAG                                                                                                           >  1:2438537/1‑112
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGG                                                                                                                <  2:2208932/107‑1
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGGTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:1919884/1‑135
                                                   CCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGATGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  2:287680/1‑135
                                                   CCATGTCGAACACAGAAGACAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:1896348/1‑135
                                                    CATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTC                                                                                   <  1:1061734/135‑1
                                                    CATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGT                                                                                    >  1:607984/1‑134
                                                          GAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGG                                                                              <  1:2129725/134‑1
                                                          GAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGG                                                                              <  2:2428931/134‑1
                                                          GAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGG                                                                              <  2:1329020/134‑1
                                                             CACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTC                                                                           <  1:248834/134‑1
                                                             CACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTC                                                                           <  1:2215753/134‑1
                                                             CACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGGTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTC                                                                           <  2:492153/134‑1
                                                             CACAGAAGTCAAGCGTCTTAACGCCGAGAGGAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTC                                                                           <  2:2553523/134‑1
                                                              ACATAAGTCAAGATTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAAAGGGGGATTATCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCG                                                                          >  2:206914/1‑134
                                                              ACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGA                                                                         <  1:2347028/135‑1
                                                              ACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGA                                                                         <  1:195595/135‑1
                                                              ACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGA                                                                         <  2:1656170/135‑1
                                                              ACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGA                                                                         <  1:1801421/135‑1
                                                              ACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGA                                                                         <  1:1562967/135‑1
                                                                       AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTAT                                                                <  2:475169/135‑1
                                                                       AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGT                                                                  <  2:2305862/133‑1
                                                                       AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGT                                                                  <  1:1437261/133‑1
                                                                       AAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGT                                                                  <  2:1870093/133‑1
                                                                            TCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCC                                                           <  2:2327735/135‑1
                                                                            TCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCC                                                           <  1:123121/135‑1
                                                                              TTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGG                                                                                                                               <  1:682092/65‑1
                                                                                         AGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGA                                               <  2:1789493/134‑1
                                                                                         AGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGA                                               <  1:721458/134‑1
                                                                                          GTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTAT                                                                >  1:119408/1‑116
                                                                                          GTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTA                                                                                                                          <  2:403166/58‑1
                                                                                          GTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTA                                                                                                                          >  1:403166/1‑58
                                                                                           TAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCTCATTATATTTTGAGC                                             <  1:554467/134‑1
                                                                                                GGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAG                                       <  1:2057638/135‑1
                                                                                                GGGGGATCGCCCCCTGAGAGGGTAGGACGTTGCCATGCTAAATGGGGGATGAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTT                                         <  2:807207/133‑1
                                                                                                 GGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAG                                       >  1:1699340/1‑134
                                                                                                      TCGCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGT                                 >  2:720160/1‑135
                                                                                                        GCCCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTG                               <  1:1725235/135‑1
                                                                                                          CCCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGT                             >  1:1328079/1‑135
                                                                                                           CCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTA                            <  1:2298347/135‑1
                                                                                                           CCCTGCGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTA                            >  2:1170395/1‑135
                                                                                                                CGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCA                       <  1:1817539/135‑1
                                                                                                                CGAGGGTAGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCA                       <  1:2171775/135‑1
                                                                                                                       AGGACGTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACT                >  2:2179217/1‑135
                                                                                                                            GTTGCCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAA           <  1:2265003/135‑1
                                                                                                                            GTTGCCATGCTAAATGGGGGATGAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTACGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTCGAGCATCTGACTTTTA            <  2:56381/134‑1
                                                                                                                                CCATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAAT          <  2:1459405/132‑1
                                                                                                                                 CATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGA      >  2:932969/1‑135
                                                                                                                                 CATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGA      >  1:9776/1‑135
                                                                                                                                 CATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGA      >  1:1330891/1‑135
                                                                                                                                 CATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGA      >  1:47733/1‑135
                                                                                                                                 CATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGA      >  2:1938249/1‑135
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAG     >  2:2408004/1‑135
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAG     >  1:1743413/1‑135
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAG     >  2:1896033/1‑135
                                                                                                                                  ATGCTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGC                                                                                           >  1:1074160/1‑49
                                                                                                                                     CTAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  1:90225/135‑1
                                                                                                                                                                                                                                                                            
CGTAAGTTAGCACAGAGTGTGGTGACGATAGTGAGAAGGATATACCTGTTCCCATGTCGAACACAGAAGTCAAGCTTCTTAACGCCGAGAGTAGTTGGGGGATCGCCCCCTGCGAGGGTAGGACGTTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Annotation_U21_Trimmed_contig_10/134‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAATGGGGGATTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGT  <  Annotation_U21_Trimmed_contig_12/1004‑871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.