| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_2 | = 374547 | 465 (1.060) | 487 (1.090) | 82/252 | 0.7 | 68.0% | coding (3920/5343 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Predicted cell‑wall‑anchored protein SasA (LPXTG motif) |
| ? | Annotation_U21_Trimmed_contig_7 | = 60417 | 0 (0.000) | coding (3/753 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Predicted cell‑wall‑anchored protein SasA (LPXTG motif) | |||||
Only 100 of 956 total aligned reads displayed.
CAACATCTGATTCAGTATCAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACTTCAAAGAGTG > Annotation_U21_Trimmed_contig_2/374415‑374681 | cAACATCTGATTCAGTATCAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGa < 2:1559585/135‑1 (MQ=255)cAACATCTGATTCAGTATCAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGa > 2:146826/1‑135 (MQ=255) aaCATCTGATTCAGTATCAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGat < 2:1029214/135‑1 (MQ=255) tCTGATTCAGTATCAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCt < 1:1817836/135‑1 (MQ=255) aTCAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATc > 2:329741/1‑135 (MQ=255) cAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACAGCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGa > 2:745270/1‑135 (MQ=255) gTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATc > 1:1372550/1‑135 (MQ=255) atcgaattcaGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatc > 2:465160‑M1/5‑111 (MQ=255) aaTTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGaa > 2:1780840/1‑134 (MQ=255) aaTTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAAATTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATAGaag > 1:1045516/1‑134 (MQ=255) ttCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACtc > 2:2262678/1‑135 (MQ=255) ttCAGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattc > 1:1345657‑M1/1‑105 (MQ=255) cagatTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcag < 1:151620‑M1/133‑33 (MQ=255) cagatTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcag > 1:1403521‑M1/3‑103 (MQ=255) cagatTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcag < 2:643031‑M1/133‑33 (MQ=255) gATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACtcagat < 1:248850/135‑1 (MQ=255) tCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACtcag < 1:1002327/130‑1 (MQ=255) tCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagat < 2:1932737‑M1/132‑35 (MQ=255) aGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACtcagattcagat < 1:1111733/135‑1 (MQ=255) cAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCagattcagattc < 2:1839370/133‑1 (MQ=255) cAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCagattcagattc < 2:290194/133‑1 (MQ=255) cAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCagattcagattc < 2:1662313/133‑1 (MQ=255) cAAAGAGTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaa < 1:841525‑M1/135‑45 (MQ=255) agagTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAaga < 2:1133066/135‑1 (MQ=255) gagTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagag < 1:1780205‑M1/135‑49 (MQ=255) gagTGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGAGAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagag < 2:501698‑M1/135‑49 (MQ=255) tGATTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagt < 2:2397525‑M1/133‑50 (MQ=255) aTTCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgat < 2:1599712‑M1/134‑53 (MQ=255) tCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagcttcaagttcaaagagtgattc < 2:1193640‑M1/134‑55 (MQ=255) tCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc < 1:1231009‑M1/134‑55 (MQ=255) tCAGTAAGTACATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc < 2:558702‑M1/134‑55 (MQ=255) agtaCATCGGATAGCCGTTCATCTTCGACTTCTGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagt < 2:2041224‑M1/135‑62 (MQ=255) agtaCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataa < 1:587726‑M1/133‑60 (MQ=255) agtaCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaa < 1:68009‑M1/133‑60 (MQ=255) agtaCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaa < 2:189802‑M1/133‑60 (MQ=255) ttaCATCTGATAGTCGCTCAAATTCGACGTCGTTTTCTGATTCAACGTCTGATAGTTATTCTACGAGTCATTCGAAATCTGATTCAGTATCGACATCTAATTCAGATTCAGATTCGAAGAGTACATCGGACAGcc < 1:2008147/134‑1 (MQ=11) gtaCATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGcc < 1:1632492/135‑1 (MQ=255) gtaCATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGcc > 2:604331/1‑135 (MQ=255) gtaCATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGcc > 1:1452472/1‑135 (MQ=255) gtaCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagta > 2:115616‑M1/1‑73 (MQ=255) gtaCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagta > 1:1958320‑M1/1‑73 (MQ=255) gtaCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctga < 2:1371989‑M1/82‑10 (MQ=255) aCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtac > 2:1273196‑M1/1‑71 (MQ=255) aCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtac > 2:962632‑M1/1‑71 (MQ=255) aCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataa < 2:2061890‑M1/130‑60 (MQ=255) aCATCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataa > 1:2061890‑M1/1‑71 (MQ=255) aTCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTc < 2:1968669/135‑1 (MQ=255) aTCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatc > 2:923455‑M1/1‑69 (MQ=255) aTCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatc > 2:2417905‑M1/1‑69 (MQ=255) tCGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcg < 1:1891158‑M1/135‑68 (MQ=255) cGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTc > 1:960837/1‑133 (MQ=255) cGGATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtc > 2:1728790‑M1/1‑67 (MQ=255) ggATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTTTCGACATCGAACTCAGATTAAGATTCGAAGAGTACATCGGACAGCCGTTCAGc < 2:2188112/135‑1 (MQ=255) gATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcggtaagtacatcggaa > 2:2306400‑M1/1‑65 (MQ=255) gATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaa > 1:2257468‑M1/1‑65 (MQ=255) gATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaa > 1:45318‑M1/1‑65 (MQ=255) gATAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtc < 2:892449‑M1/131‑67 (MQ=255) aTAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCtt > 1:1681639/1‑135 (MQ=255) tAGCCGTTCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaa < 2:1079389‑M1/107‑45 (MQ=255) gccgttcagctTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtc < 1:1563248‑M1/130‑75 (MQ=255) cgttcagCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc > 2:79295‑M1/4‑59 (MQ=255) cGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGAc > 1:192468/1‑134 (MQ=255) gttcaGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgt < 2:2088245‑M1/132‑77 (MQ=255) cTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATc > 1:376358/1‑135 (MQ=255) tCAGCTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttc > 2:2364934‑M1/1‑56 (MQ=255) cTTCGACTTCAGTATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttcggcat > 1:1171125‑M1/1‑52 (MQ=255) tCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCt > 1:798791/1‑135 (MQ=255) cGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTg > 1:1729786/1‑135 (MQ=255) aCCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGAt < 2:258999/135‑1 (MQ=255) cttcagtatctgattCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttcggcatcgac > 1:864213‑M1/7‑46 (MQ=255) atCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATc > 2:100003/1‑135 (MQ=255) tCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCg < 2:843951/135‑1 (MQ=255) cTGATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttcggcatcgacctctgtctccg < 1:905292‑M1/135‑99 (MQ=255) gATTCAACTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttcggcatcgacctctgtctccga > 2:2513232‑M1/1‑35 (MQ=255) cAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAaga > 1:427045/1‑78 (MQ=255) cAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATc < 1:2376594/127‑1 (MQ=255) cAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTg > 2:388244/1‑135 (MQ=255) cAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTg < 1:27665/135‑1 (MQ=255) cAACTTAAGATAGTGCGTCAACGAGTCATTCGATATCTGAATCAGTATCGACATCGAACTCAGATTCAGAGTCGAAGAGTACATCGGACAGACGTTCAGCTGCGACTTCATTTTCTGATTAGAAATAGGATAgag > 2:423305/1‑133 (MQ=17) aCTTCAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttcggcatcgacctctgtctccgattcaact < 2:1336473‑M1/135‑107 (MQ=255) ttCAGATAGTGCGTCAACGAGTCATTCGATATCTg < 2:2474685/35‑1 (MQ=255) cAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttcggcatcgacctctgtctccgattcaacttcag < 1:1140577‑M1/135‑111 (MQ=255) cAGATAGTGCGTCAACGAGTCACTCaacatctgattcagtatcaacatcgaattcagattcaagttcgaagagtgattcgataagtacgtcagaaagtcgttcggcatcgacctctgtctccgattcaacttcag < 2:1393175‑M1/135‑111 (MQ=255) aGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATc < 1:2289320/134‑1 (MQ=255) aGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATc < 1:2160825/134‑1 (MQ=255) gTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATc > 1:211393/1‑129 (MQ=255) gTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAg > 1:513958/1‑135 (MQ=255) gTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAg > 1:2569215/1‑135 (MQ=255) gTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAg > 2:68766/1‑135 (MQ=255) aCGAGTCATTCTATATCTGATTCAGTATCGACATCTAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACt < 1:2196171/135‑1 (MQ=255) aCGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACt < 2:2139249/135‑1 (MQ=255) aCGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACt < 1:234015/135‑1 (MQ=255) aCGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACt < 1:654210/135‑1 (MQ=255) cATTCaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc < 1:1579342‑M1/59‑55 (MQ=255) cATTCaacatctgattcagtatcaacatcgaattcagat < 1:617511‑M1/39‑35 (MQ=255) cATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACTTCAAag > 1:1291526/1‑135 (MQ=255) aTTCaacatctgattcagtatcaacatcgaattcagat > 1:742714‑M1/1‑4 (MQ=255) aTTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACTTCAAag < 2:1505768/134‑1 (MQ=255) aTTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACTTCAAag < 1:2439248/134‑1 (MQ=255) cGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACTTCAAAGAGTg > 1:315143/1‑135 (MQ=255) | CAACATCTGATTCAGTATCAACGTCAAATTCGGATTCAAGTTCAAAGAGTGATTCAGTAAGTACATCGGATAGTCGCTCAACTTCGACCTCCATATCTGATTCAACTTCAGATAGTGCGTCAACGAGTCATTCGATATCTGATTCAGTATCGACATCGAACTCAGATTCAGATTCGAAGAGTACATCGGACAGCCGTTCAGCTTCGACATCAGTTTCTGATTCGAAATCGGATAGTGCATCAAAATCGGACAGTACTTCAAAGAGTG > Annotation_U21_Trimmed_contig_2/374415‑374681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |