| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_2 | = 375970 | 0 (0.000) | 228 (0.500) | 58/256 | 2.6 | 100% | coding (5343/5343 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Predicted cell‑wall‑anchored protein SasA (LPXTG motif) |
| ? | Annotation_U21_Trimmed_contig_7 | = 60419 | 0 (0.000) | coding (1/753 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | Predicted cell‑wall‑anchored protein SasA (LPXTG motif) | |||||
Only 100 of 235 total aligned reads displayed.
CATCGGCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Annotation_U21_Trimmed_contig_2/375837‑375970 | cATCGGCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCAt < 1:2190454/134‑1 (MQ=255) aTCGGCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtc > 2:1380250‑M1/1‑133 (MQ=255) aTCGGCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtc > 1:542466‑M1/1‑133 (MQ=255) aTCGGCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtc > 2:542260‑M1/1‑133 (MQ=255) cGGCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaa < 1:1787164‑M1/135‑5 (MQ=255) ggCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTTTATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaac < 2:1829215‑M1/135‑6 (MQ=255) cAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaac > 2:216940‑M1/1‑128 (MQ=255) cAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTACGGATAGTACATCGACAAGTCATtcaac > 1:1907017‑M1/1‑128 (MQ=255) aaGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaac > 2:1563797‑M1/1‑127 (MQ=255) gTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctg > 1:2398139‑M1/1‑125 (MQ=255) gTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctg > 1:2042967‑M1/1‑125 (MQ=255) cACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctga > 1:2181512‑M1/1‑123 (MQ=255) cACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctga > 1:2432505‑M1/1‑123 (MQ=255) cACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctga > 2:34225‑M1/1‑123 (MQ=255) cACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctga > 1:273816‑M1/1‑123 (MQ=255) aCTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctga < 1:2311571‑M1/133‑12 (MQ=255) aCTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctga < 1:2086986‑M1/133‑12 (MQ=255) tCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGAATCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTAGGATAGTACATCGACAAGTCATtcaacatctgattca > 2:2318887‑M1/1‑120 (MQ=255) tGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaac < 1:956585‑M1/135‑24 (MQ=255) tGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaac < 2:1200093‑M1/135‑24 (MQ=255) tGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaac > 2:1899447‑M1/1‑112 (MQ=255) gATTCAGTATCGACATCGAACTCATACTCAGATTCGAAGAGTATTTCGGAAAGCCGTTCAACTTCGACATCAATATCGGATTCAACTTCGGATAGAACAACGACAAGTCATtcaacatctgattcagtatcaac > 2:1881990‑M1/1‑111 (MQ=255) aTTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacat > 2:640320‑M1/1‑110 (MQ=255) aTTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacat > 1:1292986‑M1/1‑110 (MQ=255) aTTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaac < 1:2526391‑M1/115‑6 (MQ=255) tCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGTCAAGTCATtcaacatctgattcagtatcaacatcg > 2:1407265‑M1/1‑108 (MQ=255) cAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcga > 2:1041048‑M1/1‑107 (MQ=255) cAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcga > 1:1633094‑M1/1‑107 (MQ=255) cAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcga > 2:171313‑M1/1‑107 (MQ=255) cAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcga > 2:701944‑M1/1‑107 (MQ=255) cAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcga > 2:758488‑M1/1‑107 (MQ=255) cAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcga > 2:1903771‑M1/1‑107 (MQ=255) cAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcga > 1:1076461‑M1/1‑107 (MQ=255) aTCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattc > 2:1645949‑M1/1‑103 (MQ=255) aTCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattc > 2:1731668‑M1/1‑103 (MQ=255) cGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCTGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatcagattaagtatcaacatcgacttcag > 1:1303526‑M1/1‑101 (MQ=255) cGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAATTCATtcaacatctgattcagtatcaacatcgaattcag > 1:1471904‑M1/1‑101 (MQ=255) cGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcag < 2:1292986‑M1/135‑35 (MQ=255) cGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcag > 2:2227557‑M1/1‑101 (MQ=255) cGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcag > 2:59911‑M1/1‑101 (MQ=255) gACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcaga > 1:1942436‑M1/1‑100 (MQ=255) aCATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagat < 1:1894282‑M1/135‑37 (MQ=255) aCATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagat < 2:1225961‑M1/135‑37 (MQ=255) aCATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagat < 1:678244‑M1/135‑37 (MQ=255) aTCGAACTCAGACTCAGATTCGACGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaccatcgaattcagattc > 2:934179‑M1/1‑97 (MQ=255) tCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattca > 1:1932737‑M1/1‑96 (MQ=255) cGAACTCAGACTCAGATTCGATTAGTATGTCGGATAGCAGTTAAACTTCGACATCTATATCGGATTCATCTTCGGATAGTACATCGACAAGTCATtcaacatatgattcagtatcaacatcgaattcagattcaa < 2:1367210‑M1/135‑41 (MQ=255) cactcatactcagaTTCGAAGAGTATTTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagt < 2:660473‑M1/134‑43 (MQ=255) aaCTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagt < 1:414691‑M1/135‑43 (MQ=255) aaCTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagt < 2:19871‑M1/135‑43 (MQ=255) ctcagactcagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTACTGATAGTACATCGACAAGTCATtcaacatctgagtcagtatcaacatagaattcagattcaagttc > 1:1367210‑M1/1‑91 (MQ=255) ctcagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagag > 2:2479965‑M1/1‑85 (MQ=255) ctcagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagag > 1:672729‑M1/1‑85 (MQ=255) ctcagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttc > 2:1012574‑M1/1‑85 (MQ=255) ctcagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttc < 1:1012574‑M1/129‑45 (MQ=255) tcagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagt < 2:2506324‑M1/135‑52 (MQ=255) tcagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagt < 1:1350381‑M1/135‑52 (MQ=255) cagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagt > 1:1432187‑M1/1‑83 (MQ=255) cagaTTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagt < 2:1432187‑M1/134‑52 (MQ=255) ttCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc > 1:1811118‑M1/1‑79 (MQ=255) tCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGTTTCAACTTCGGATAGTACATCGACAAGTCTTtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc < 1:1465221‑M1/134‑57 (MQ=255) tCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc < 2:2268404‑M1/134‑57 (MQ=255) tCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc < 2:2140567‑M1/134‑57 (MQ=255) tCGAAGAGTATGTCGGATAGCCGTTCAACTTAGACATATATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc < 1:613497‑M1/134‑57 (MQ=255) cGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcag > 2:2282245‑M1/1‑77 (MQ=255) cGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcag > 1:61628‑M1/1‑77 (MQ=255) gAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagt < 2:2353853‑M1/135‑60 (MQ=255) aaGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagta > 2:560712‑M1/1‑75 (MQ=255) gagTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaa < 1:1380698‑M1/134‑62 (MQ=255) gagTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaa < 1:789254‑M1/134‑62 (MQ=255) gagTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGAGAGTACATCGACAAGTCATtcaacatctgattcagaatcaacatcgaattcagattcaagttcaaagagtgattcagtaag > 1:718846‑M1/1‑73 (MQ=255) tATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagt < 1:2129877‑M1/133‑64 (MQ=255) tATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagt < 2:379346‑M1/133‑64 (MQ=255) tATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagt < 1:1497492‑M1/133‑64 (MQ=255) tATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagt < 2:1474346‑M1/133‑64 (MQ=255) tATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagt < 1:1840381‑M1/133‑64 (MQ=255) tATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagt < 2:2526816‑M1/133‑64 (MQ=255) aTGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtac > 1:2292435‑M1/1‑69 (MQ=255) gTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatc > 1:1068446‑M1/1‑67 (MQ=255) gTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatc > 1:1326833‑M1/1‑67 (MQ=255) gTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatc < 1:1699944‑M1/135‑69 (MQ=255) gTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagt > 1:1212540‑M1/1‑67 (MQ=255) gTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCACtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatc > 2:77711‑M1/1‑67 (MQ=255) gTCGGATAGCCGTACAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatc > 2:1166977‑M1/1‑67 (MQ=255) tCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcg < 1:2454143‑M1/135‑70 (MQ=255) tCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcg < 1:2168341‑M1/135‑70 (MQ=255) tCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcg < 1:1957187‑M1/135‑70 (MQ=255) cGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcgg > 2:98679‑M1/1‑65 (MQ=255) ggATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaagtacatcgga > 1:660456‑M1/1‑64 (MQ=255) gCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaa < 1:1568472‑M1/120‑62 (MQ=255) gCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattcagtaa > 2:1568472‑M1/1‑59 (MQ=255) aaCTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCAt < 1:2281454/52‑1 (MQ=255) cATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCATtcaacatct < 1:994809‑M1/53‑10 (MQ=255) aaCTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtga > 2:124481‑M1/1‑28 (MQ=255) aaCTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagt > 2:467250‑M1/1‑28 (MQ=255) aaCTTCGGATAGTACATCGACAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagt < 1:467250‑M1/79‑52 (MQ=255) gACAAGTCATtcaacatctgattcagtatcaacatcgaa < 2:13539‑M1/39‑30 (MQ=255) cAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagagtgattc > 1:639483‑M1/1‑8 (MQ=255) cAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagttcaaagag < 2:858855‑M1/58‑51 (MQ=255) cAAGTCATtcaacatctgattcagtatcaacatcgaattcagattcaagt > 1:114581‑M1/1‑8 (MQ=255) | CATCGGCAAGTCACTCAACATCTGATTCAGTATCGACATCGAACTCAGACTCAGATTCGAAGAGTATGTCGGATAGCCGTTCAACTTCGACATCTATATCGGATTCAACTTCGGATAGTACATCGACAAGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Annotation_U21_Trimmed_contig_2/375837‑375970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |