| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Annotation_U21_Trimmed_contig_1 | = 50 | 117 (0.350) | 63 (1.280) +AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGC |
11/38 | 0.5 | 74.9% | coding (50/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein |
| ? | Annotation_U21_Trimmed_contig_1 | 76 = | 167 (0.500) | coding (76/567 nt) | rasttk_feature_annotation_tool=annotate_proteins_km er_v2 | hypothetical protein | |||||
Only 100 of 263 total aligned reads displayed.
‑‑‑‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Annotation_U21_Trimmed_contig_1/1‑50‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGCACCATCAAGC > Annotation_U21_Trimmed_contig_1/76‑90 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGT > 2:85291/7‑135gcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAG < 2:2339833/128‑1gcaccaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGAGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGT < 2:1175205/129‑1 accaAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAG > 2:957775/5‑135 caAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCG > 2:682437/3‑135 caAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCG > 1:577427/3‑135 AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCA < 2:2984202/135‑1 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGT > 1:1922895/1‑134 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGT > 1:1244161/1‑134 TCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGT > 1:1773732/1‑134 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACAT > 2:2605800/1‑134 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGAGCAGTGACAT > 2:2053051/1‑134 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCA < 1:1125189/112‑1 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGC > 2:2346622/1‑72 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGC < 2:617729/60‑1 TGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGC > 1:617729/1‑60 GTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACAT < 2:835365/133‑1 TATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCAC < 2:2790422/135‑1 TCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAA < 1:2680782/135‑1 CATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACA > 2:1456860/1‑133 CATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATC < 2:476485/112‑1 CATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCGGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACA > 2:1586533/1‑133 CATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGAGCAGTAACATCACAAGCTGAAACTAGCGTAGAACAAATTTCAGCTGTATCATCAGCTGCAAGCTCATATGAACCATCAAGTATAGAAGTTACAACACA > 1:2667598/1‑133 ATCAGCTGCAAGCTCAGTAGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGC < 2:1852742/135‑1 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGC > 1:1581108/1‑134 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGC > 1:2020851/1‑134 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 1:1325999/1‑100 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGC < 2:1939301/92‑1 TCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTA > 2:1305510/1‑58 AGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 2:1196928/135‑1 AGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 2:127431/135‑1 AGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 2:1784232/135‑1 AGCTGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAAAATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 2:59460/135‑1 TGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCCGCTGGATCATCAGCTGCAAGCTCAGATGCACCATCAAGTAGGGCACTGACATCACAAGCAGCAAa > 2:1644749/1‑134 TGCAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAAC > 1:2144641/1‑135 cacGCTCAGTTGCCCCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTCGCTGCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACACGCTGCAACTA < 1:646848/132‑1 CAAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTA < 1:37525/135‑1 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAG > 1:494242/1‑135 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAG > 1:297195/1‑135 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAG > 1:1937702/1‑135 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAG > 2:2862482/1‑135 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAG > 1:975472/1‑135 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG < 1:1354727/92‑1 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 2:1354727/1‑92 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCA > 1:2743455/1‑79 AAGCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGT < 1:339776/64‑1 GCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAATCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAATCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCCACTAGCG > 1:1025383/1‑135 GCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCTGTGTCATAACAATCTCCAAgaagag > 1:1728451/1‑129 GCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCG > 2:2127885/1‑135 GCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCG > 2:1491697/1‑135 GCTCAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGATCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCG > 1:718437/1‑135 GCTCAGTTGCACCATCAAGTAGGGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGGTCAGCTGTATCATCAGCTGCAAGCTCGGTTGCACCATCAAGTAGAGCTGTTACATCACAAGCTGAAACTAGag > 2:2847280/1‑133 CAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCACCTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA < 2:2413169/134‑1 CAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA < 2:2003352/134‑1 CAGTTGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA < 2:2809812/134‑1 actaGCAACATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGC < 1:839740/131‑1 AGTAGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGC < 1:910441/135‑1 TGCACCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACC > 1:733654/1‑135 CCATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagt < 2:1564623/135‑4 CATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagtt > 2:2194580/1‑131 CATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagtt < 1:2855566/135‑5 ATCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAa < 1:2261590/131‑2 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttca < 1:1539805/135‑7 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttca < 2:1750075/135‑7 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttca < 2:297195/135‑7 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttca < 2:1244161/135‑7 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 1:2625466/1‑129 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 1:2241665/1‑129 TCAAGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCA < 2:2660427/51‑1 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCGCAAGCTGCAACTAGCGTAGCACCAa > 1:681290/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttca < 2:1044313/132‑7 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 1:2347505/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAA < 1:928111/105‑1 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGGTGCACCATCAAGTAGAGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAagttc > 2:1226942/1‑126 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCA > 1:2412716/1‑48 AGTAGTGCAGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGT < 2:904032/45‑1 AGTAACATCACAAGCTGTAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC > 2:2082996/1‑102 AGTAACATCACAAGCTGTAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 2:2486641/102‑1 AGTAACATCACAAGCTGTAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGAGCAGTGACATCACAAGCTGC > 1:2486641/1‑102 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTT > 2:363104/1‑67 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTT > 2:1373668/1‑67 AGTAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 2:2934333/1‑65 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAa > 2:1549973/1‑116 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACAT < 1:2060446/90‑1 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTA < 2:2119007/78‑1 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTA > 1:2119007/1‑78 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG > 2:143946/1‑63 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAG < 1:143946/63‑1 TAACATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCT < 2:353179/60‑1 CATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA < 2:1681923/107‑1 CATCACAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA > 1:1681923/1‑107 CAAGCTGTAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCA > 2:1140853/1‑75 CAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAa < 1:1967144/109‑2 CAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTA > 1:1148993/1‑102 CAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGC < 2:1955497/99‑1 CAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCCCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC > 2:320595/1‑92 CAAGCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCCCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC < 1:320595/92‑1 GCTGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTAGCGTAGCACCAa > 1:1182877/1‑105 TGCAACTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGC > 1:2094757/1‑87 CTAGCGTAGCACCAAGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGCGCAGTGACATCACAAGCTGCAACTA < 2:650651/87‑1 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ‑‑‑‑‑‑AGTTCAGCTGTATCATCAGCTGCAAGCTCAGTTGCACCATCAAGTAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Annotation_U21_Trimmed_contig_1/1‑50‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAGCACCATCAAGC > Annotation_U21_Trimmed_contig_1/76‑90 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |