| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 1,932,640 | +C | intergenic (‑107/+43) | rluA CDS (23S rRNA (746) and tRNA (32) pseudouridine synthase) ← / ← minE CDS (Cell division topological specificity factor) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 1,932,638 | 1 | . | C | 92.2% | 1743.9 / 142.2 | 494 | intergenic (‑105/+45) | rluA CDS (23S rRNA (746) and tRNA (32) pseudouridine synthase)/minE CDS (Cell division topological specificity factor) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (36/2); new base C (250/202); total (290/204) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 512 total aligned reads displayed.
TCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTG‑CCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAT > AE015451_phaM1/1932502‑1932769 | aaGAGGATCTGGACATTCGACAGCGGCATTGCAGGTTTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTG‑ccc < 2:9415098/137‑2 (MQ=255) agGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTG‑cccgcg < 2:4108992/137‑5 (MQ=255) agGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTG‑cccgcg < 2:8863462/137‑5 (MQ=255) cTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑ggg < 2:3312818/137‑1 (MQ=255) ggACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGGCAGCCCGCTCCTCCAAAGGATACGCGTCCCCCGTCGGGG‑CGGGTT‑TTC‑CCGCGAA‑AGGCt > 1:18105231/1‑137 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGGAGGGAAAACCGCCCCTACAAAAGAGATGCGTCCCCTGTAGGAGAAGGT‑T‑TTT‑CCGCGAA‑GGGGTGCAAGGGAg > 1:14682669/1‑137 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCTGGCAAGCCCGCCCCTCCAAAGGACATGGGTCCCCTTTAGGGGCCGGA‑C‑TGT‑CCGCGAA‑GGGAGGCaaagaag > 2:5249548/1‑132 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCCGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAg > 2:11349096/1‑137 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGAGATGCGTCCCCTGTGGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCaa > 2:16287738/1‑136 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGACATGCGTCCCCTGGAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGGTGCAAGGCAg > 2:8258067/1‑137 (MQ=38) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAACCCCCCCCCCCAAAGGACATGCGTCCCCCGTAGGAG‑CGGG‑CTTTC‑CCCCGAA‑GGGCTGTaaagaag > 2:6571826/1‑132 (MQ=25) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGAAAGCCCGCTCCTACAAAGGAGATGCGTCCCCTGTAGGAG‑CGGGCC‑TTT‑CCGCGAA‑AGGATGCAAAGCAg > 2:17896959/1‑137 (MQ=255) aCAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGAAAACCCCCCCCCCCAAAAGATACGCGTCCCCCGTCGGAA‑AGGG‑G‑TTGCCCACGAA‑GGGATTCAAAGCaa > 1:1681485/1‑136 (MQ=255) cAGTGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGTGGGGGCCGCTTTGCGGCCCTTCGAGGGAAAGCCCGCTCCTACAAAGGATGTGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGc < 1:4498332/137‑1 (MQ=38) gCGGCATTGCAGGTCTCACGAAAAGAGAAGTAAACGTTGGGGCCGCTTTGTGGCCCTTCGCGGGCAATCCCGCTCCTACAAAGGATATGCGTCCCCTTTAGGAG‑CGGG‑C‑TTTCCCGCGAA‑GGGCTGCAAGGCAGccc < 1:3209824/137‑1 (MQ=38) gCAGTTCTCATGAAAAGAGCAGGAAACGTGGGGGCAGCTTTGCGGCCCTTCGCGGGAAATCCCGCTCCTACAAAGGATATGCTTCCCCGGGAGGAG‑TGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGt < 1:5370071/137‑1 (MQ=25) tctcACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACt < 1:8150173/137‑1 (MQ=255) tctcAAGAAAATAGCAGTAAACGTTGGGGCCGTTTTGCGGCCTTTCGTGGGCAAGCCCGCTCCTACAAGGGGTATGCTTCCCTTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACt < 1:6586606/137‑1 (MQ=25) tcccACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACt < 1:17948028/134‑1 (MQ=255) tcACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTCCAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACtcc > 2:15050091/1‑135 (MQ=255) aCGAAAATAGCAGTCAACCCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCTCTCCGGCAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTAcgc < 2:17010194/137‑1 (MQ=37) aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGGAAGCCCCCCCCTACAAAGGAGATGCATCCCACATAGGAG‑CGGGAT‑TTC‑CCACGAA‑GGGCTGCAAAGCCGCCCCAAACTGTCGaacccga > 2:5517025/1‑131 (MQ=255) aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCCCCCCTCCAAAAGATGTGTTTCCCCCCTTGGGG‑CGGG‑CTTTC‑CCACGAAGGGGCTTCAGGGC‑GTCCCAAACTTTCGACTAcgc > 2:15792675/1‑137 (MQ=255) aaaaTAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCCCCAAAAGGTATGCGTCCCCTGTGGGAG‑CGGGTT‑TTC‑CCTCTAA‑GGGCTGCAAGGCAGCCCCAAACTGTTGACTAccatgg > 1:13159577/1‑132 (MQ=25) gCAGTAAACGCTGGGGCCACTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTTTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCg < 2:10308009/137‑1 (MQ=255) ggaaaCGTGGGGGCCGCTTTGCGACCCTTCGTGGGCAAGCCCGCTCCTACAAGGGATATGCGCCCCCTGTAGGAG‑TGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATc < 1:15441440/135‑1 (MQ=37) tAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCCACAAAGGATATGCGTCCCCCGTAAGAG‑CGGG‑C‑TTGCCCACGAA‑GGGCTGCAAGGCAACCCCAAATTGTCGACTACGCGGATCAGCGATcc > 2:12536581/1‑137 (MQ=38) aaaCGCTGGGGCCGTTTTGCGGCCTTTCGCGGGCAAGCCCGCTCCTACAAGGGATGTGCTTCCCCTGGAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 1:7584198/137‑1 (MQ=37) aaaCGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 2:3714961/137‑1 (MQ=255) aaaCGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGGG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 1:5585134/137‑1 (MQ=255) aaaCGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 2:18522357/137‑1 (MQ=255) aaaCGCTGGGGCCGCTTTGCGGCCCTTCGCGGACAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 2:12000812/137‑1 (MQ=255) aaaCGCGGGGGCCGCTGGGCGGCCCTTCGCGGGCAAGCCCGCTCCGACAAAGGATATGCGTCCTCGTTGGGAG‑TGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCg < 1:12562993/137‑1 (MQ=37) cgttGGGGCCGCTTGGCGGCCTTTCGCGGGCAAGCCCGCTCCGACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑T‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCa < 1:17449039/134‑1 (MQ=37) cTGGGGCCGCTTTGCGGCCCTTCTCGGGAAAGCCCGCTCCTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAgg < 2:2795049/137‑1 (MQ=38) gCCGTTTTGTGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGTGTCCCTTGTAGGAG‑CGGT‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGAt < 1:10023657/137‑1 (MQ=38) ccGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTAAAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATg < 1:10815695/137‑1 (MQ=255) tGCGGCCCTTCGCGGGCAAGACCTCTCCTACAAAGGATATGCGTCCCCTGTCGGAG‑CGGG‑CTTTC‑CCGCGAA‑GGGTTGCCAAGCCACCCCAAATTGTCGACTACGCGGATCAACGGTCCAGCAGGGTGATGTTCCGc > 2:17568214/1‑137 (MQ=25) cgcgGGCAATCCTGCTCCTACAAGGGGTATTCTCCCCTTGTAGGAG‑CGGG‑C‑TTTCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCg < 1:4822192/137‑1 (MQ=37) cAAGCCCGCTCCTACAAAGGGTATCCGCCCCCTGTAGGGG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGagcagc < 1:6088728/137‑1 (MQ=39) cGCTCCTACAAAGGATATGCGTCCCCTGTCGGAG‑CGGG‑C‑CTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTTTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCCGCTTCAGAATCGAGCAGCTGCCCt > 1:10522147/1‑137 (MQ=38) ccTACAAAGGATATGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtt < 1:2589756/137‑1 (MQ=255) tACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtttt > 2:986866/1‑137 (MQ=255) tACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtttt > 1:18522450/1‑137 (MQ=255) gaaaaaGGAGGTGCGTCCCCTGTGGGGG‑CGGG‑CTTTC‑CCGCGAA‑GGGCTGCAAGGCAGCCCCAAAGTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGtttt < 1:11583530/134‑1 (MQ=38) cAAAGGATATGCGTCCCCTGTAGGAG‑CGTG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGGCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTcc < 2:4692479/137‑1 (MQ=255) cAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTcc < 2:10241005/137‑1 (MQ=255) cAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTcc < 2:11788315/137‑1 (MQ=255) aaaGAATGTGCTCCCCCTGGAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCa < 1:687788/137‑1 (MQ=38) aaGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAg > 2:6197823/1‑137 (MQ=255) aGGATATTCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc < 2:11051702/137‑1 (MQ=255) aGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGc < 2:16518117/137‑1 (MQ=255) gATATTCGTCCCCTTTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTc < 1:8737900/137‑1 (MQ=255) gATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTc < 1:14049089/137‑1 (MQ=255) gtGCTTCCCTTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat < 1:5031348/136‑1 (MQ=255) atGCTTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat < 2:9178002/137‑1 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 2:2467559/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 2:10957077/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 2:1319386/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 1:13421895/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 1:12498137/1‑137 (MQ=255) atGCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGat > 1:7088640/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCNAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 1:15884966/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:7449192/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:9707975/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:13949854/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:12757194/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 1:9439602/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 1:9027700/1‑137 (MQ=255) gCGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 1:7836898/1‑137 (MQ=255) gCGTCCCATGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:9494662/1‑137 (MQ=255) gCGTCCACTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGatat > 2:12896829/1‑137 (MQ=255) cGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATg > 1:9905768/1‑137 (MQ=255) cGTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATg > 2:4411563/1‑137 (MQ=255) gTCCCCTGTGGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGc < 1:11939287/137‑1 (MQ=255) gTCCCCTGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGc > 1:2959877/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATNCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:16273341/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:17151406/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:5659420/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:7706336/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:3519761/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:4004050/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:6337019/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:12949433/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 2:13617419/1‑137 (MQ=255) tGTAGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCNCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCAcatca > 1:15264472/1‑137 (MQ=255) aGGAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCg > 1:18791446/1‑137 (MQ=255) ggAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGt < 2:8477945/137‑1 (MQ=255) gAG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCATGGTTTTCCAGCTCGATATGCACATCATCGtt > 2:13747354/1‑137 (MQ=255) aG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAATGCAGCCCCAAATCGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTg < 2:14186511/137‑1 (MQ=255) aG‑CGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTg < 2:14613543/137‑1 (MQ=255) cGGG‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTCCGCGGATCAGCGATCCGGCAGGGGGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGcc < 2:11608521/137‑1 (MQ=255) cGGG‑C‑TTGCCCGCGAA‑GGGCGGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGcc < 2:3541988/137‑1 (MQ=255) g‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:14958657/1‑137 (MQ=255) g‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:4003388/1‑137 (MQ=255) g‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:7088518/1‑137 (MQ=255) g‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:15131663/1‑137 (MQ=255) g‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:1108734/1‑137 (MQ=255) g‑C‑TTGCCCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 1:10365838/1‑137 (MQ=255) g‑C‑TTGCCCGCGAA‑GGGCCGCAAGGCAGCCCCAAATTGTCGACTACGCGGACCAGCGATCCGGCAGGGTGATGTTGAGATCCAGACCCTAGCAGCTGCCTCAGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAt > 2:18251036/1‑137 (MQ=255) | TCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAG‑CGGG‑C‑TTG‑CCGCGAA‑GGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGAT > AE015451_phaM1/1932502‑1932769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |