| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 1,738,086 | Δ40,059 bp | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | 60 genes [PP_1532 CDS (putative Phage integrase)], PP_1533 CDS (putative Excisionase), PP_1534 CDS (conserved protein of unknown function), PP_1535 CDS (putative Methyltransferase), PP_1536 CDS (conserved protein of unknown function), PP_1537 CDS (conserved protein of unknown function), PP_5472 CDS (conserved exported protein of unknown function), PP_1538 CDS (conserved protein of unknown function), PP_1539 CDS (conserved protein of unknown function), PP_1540 CDS (conserved protein of unknown function), PP_1541 CDS (putative Methyltransferase), PP_1542 CDS (conserved protein of unknown function), PP_1543 CDS (conserved protein of unknown function), PP_1544 CDS (conserved protein of unknown function), PP_1545 CDS (conserved protein of unknown function), PP_1546 CDS (conserved protein of unknown function), PP_5473 CDS (putative transcriptional regulator_ LuxR family), PP_5474 CDS (conserved protein of unknown function of phage origin), PP_1548 CDS (conserved protein of unknown function), PP_5744 CDS (conserved protein of unknown function_ phage origin), PP_1549 CDS (Transcriptional regulator_ Cro_CI family), PP_1550 CDS (Transcriptional regulator_ Cro_CI family), PP_1551 CDS (putative Phage replication protein O), PP_1552 CDS (putative Phage replication protein), PP_1553 CDS (conserved protein of unknown function), PP_1554 CDS (conserved protein of unknown function), PP_1555 CDS (putative Phage integrase), PP_1556 CDS (conserved protein of unknown function), PP_1557 CDS (conserved protein of unknown function), PP_1558 CDS (conserved protein of unknown function), PP_1559 CDS (Holin), PP_1560 CDS (conserved protein of unknown function), PP_1561 CDS (putative Phage holin), PP_1562 CDS (putative Phage terminase_ small subunit), PP_1563 CDS (putative Phage terminase_ large subunit), PP_1564 CDS (conserved exported protein of unknown function), PP_1565 CDS (Phage portal protein_ HK97 family), PP_1566 CDS (Peptidase U35), PP_1567 CDS (Capsid protein), PP_1568 CDS (conserved protein of unknown function), PP_1569 CDS (conserved protein of unknown function), PP_1570 CDS (Head‑tail adaptor), PP_1571 CDS (conserved protein of unknown function), PP_1572 CDS (conserved protein of unknown function), PP_1573 CDS (putative Major tail protein), PP_1574 CDS (conserved protein of unknown function), PP_1575 CDS (conserved protein of unknown function), PP_1576 CDS (putative Immunity protein), PP_1577 CDS (Phage tail tape meausure protein_ lambda family), PP_1578 CDS (conserved protein of unknown function), PP_5475 CDS (conserved protein of unknown function), PP_1579 CDS (conserved protein of unknown function), PP_1580 CDS (conserved protein of unknown function), PP_1581 CDS (BNR domain protein), PP_1582 CDS (conserved protein of unknown function), PP_1583 CDS (putative Structural protein P5), PP_1584 CDS (conserved protein of unknown function), PP_5476 CDS (conserved protein of unknown function), PP_1585 CDS (putative Antidote protein), [PP_1586 CDS (putative Killer protein)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 1738086 | 1778144 | 40059 | 914 [0] | [0] 909 | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | [PP_1532 CDS (putative Phage integrase)],PP_1533 CDS (putative Excisionase),PP_1534 CDS (conserved protein of unknown function),PP_1535 CDS (putative Methyltransferase),PP_1536 CDS (conserved protein of unknown function),PP_1537 CDS (conserved protein of unknown function),PP_5472 CDS (conserved exported protein of unknown function),PP_1538 CDS (conserved protein of unknown function),PP_1539 CDS (conserved protein of unknown function),PP_1540 CDS (conserved protein of unknown function),PP_1541 CDS (putative Methyltransferase),PP_1542 CDS (conserved protein of unknown function),PP_1543 CDS (conserved protein of unknown function),PP_1544 CDS (conserved protein of unknown function),PP_1545 CDS (conserved protein of unknown function),PP_1546 CDS (conserved protein of unknown function),PP_5473 CDS (putative transcriptional regulator_ LuxR family),PP_5474 CDS (conserved protein of unknown function of phage origin),PP_1548 CDS (conserved protein of unknown function),PP_5744 CDS (conserved protein of unknown function_ phage origin),PP_1549 CDS (Transcriptional regulator_ Cro_CI family),PP_1550 CDS (Transcriptional regulator_ Cro_CI family),PP_1551 CDS (putative Phage replication protein O),PP_1552 CDS (putative Phage replication protein),PP_1553 CDS (conserved protein of unknown function),PP_1554 CDS (conserved protein of unknown function),PP_1555 CDS (putative Phage integrase),PP_1556 CDS (conserved protein of unknown function),PP_1557 CDS (conserved protein of unknown function),PP_1558 CDS (conserved protein of unknown function),PP_1559 CDS (Holin),PP_1560 CDS (conserved protein of unknown function),PP_1561 CDS (putative Phage holin),PP_1562 CDS (putative Phage terminase_ small subunit),PP_1563 CDS (putative Phage terminase_ large subunit),PP_1564 CDS (conserved exported protein of unknown function),PP_1565 CDS (Phage portal protein_ HK97 family),PP_1566 CDS (Peptidase U35),PP_1567 CDS (Capsid protein),PP_1568 CDS (conserved protein of unknown function),PP_1569 CDS (conserved protein of unknown function),PP_1570 CDS (Head‑tail adaptor),PP_1571 CDS (conserved protein of unknown function),PP_1572 CDS (conserved protein of unknown function),PP_1573 CDS (putative Major tail protein),PP_1574 CDS (conserved protein of unknown function),PP_1575 CDS (conserved protein of unknown function),PP_1576 CDS (putative Immunity protein),PP_1577 CDS (Phage tail tape meausure protein_ lambda family),PP_1578 CDS (conserved protein of unknown function),PP_5475 CDS (conserved protein of unknown function),PP_1579 CDS (conserved protein of unknown function),PP_1580 CDS (conserved protein of unknown function),PP_1581 CDS (BNR domain protein),PP_1582 CDS (conserved protein of unknown function),PP_1583 CDS (putative Structural protein P5),PP_1584 CDS (conserved protein of unknown function),PP_5476 CDS (conserved protein of unknown function),PP_1585 CDS (putative Antidote protein),[PP_1586 CDS (putative Killer protein)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 1738085 | 0 (0.000) | 909 (1.070) | 132/270 | 0.2 | 100% | intergenic (‑67/+1) | yffB CDS (putative glutathione‑dependent thiol reductase)/PP_1532 CDS (putative Phage integrase) | –/– |
| ? | AE015451_phaM1 | 1778145 = | 0 (0.000) | intergenic (‑1/‑196) | PP_1586 CDS (putative Killer protein)/PP_1587 CDS (NhaP‑type Na+_H+ and K+_H+ antiporters) | –/– | |||||
Only 100 of 909 total aligned reads displayed.
TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG > 2:1076861/1‑137 TTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGC < 1:9573792/137‑1 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:16107136/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:2866018/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT < 2:454126/137‑1 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 1:11216437/1‑137 CAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATGTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGC < 2:7319940/137‑1 GTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTA < 1:1234702/137‑1 TACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTGAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAA > 1:4211132/1‑137 TACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAA > 1:184753/1‑137 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 2:2061526/1‑137 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 1:6466143/1‑137 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 1:1325437/1‑137 TTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTT < 1:7175271/137‑1 AGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATA < 1:6036005/137‑1 GGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATAC > 2:15836072/1‑137 TTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACG > 1:11731727/1‑137 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:6466143/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:4254469/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:12155632/137‑1 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 1:8231193/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 1:14968823/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 1:15764093/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 2:226633/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 2:9057836/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 2:15662691/1‑137 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 2:12762099/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 1:5006330/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 1:1363065/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 2:15299191/137‑1 AAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGT > 1:7691339/1‑137 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCTATTATACGACGGGATCGCTGTAGTT < 2:17742532/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 2:17085670/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 1:9306564/137‑1 AGTGGAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATGAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 1:28110/137‑1 TGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCA < 1:14701432/137‑1 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:10221418/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:9060088/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:12005088/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT < 2:9528705/137‑1 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:8531019/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:7792958/1‑137 CATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTC > 1:4709769/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:564894/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:4488629/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 1:5310994/1‑137 AAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCA < 1:14541363/137‑1 GGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACG < 2:7510222/137‑1 TGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACT < 2:11784379/137‑1 GGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCG > 1:11496898/1‑137 TTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAA < 2:254464/137‑1 TTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAA < 2:4691710/137‑1 TTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAA < 1:5174054/137‑1 TTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAA < 1:8477217/137‑1 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC < 1:3942615/137‑1 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC < 1:2109605/137‑1 CCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC < 2:7040706/137‑1 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTTGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGTACGCGACTCGCAAGCTCCGGT < 1:16171570/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA > 1:6922532/1‑137 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 2:3438810/137‑1 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC < 2:14121079/137‑1 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 2:6658987/1‑137 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 1:10520865/1‑137 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 2:17543757/1‑137 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 2:17983396/1‑137 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 1:7945178/1‑137 CCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGGAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACAT < 2:10546918/137‑1 CTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATC < 2:14910066/137‑1 CTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATC < 1:10986399/137‑1 TCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCT < 1:10721899/137‑1 TCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCT < 2:18367565/137‑1 CCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGC < 1:7534648/137‑1 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:3185631/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:10082115/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:54691/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:16673471/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:14532978/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG < 1:15396069/137‑1 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 1:17212650/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 1:5818600/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:13153087/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACAT < 2:4959891/131‑1 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAA < 1:17693151/118‑1 ATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTA < 2:11232322/137‑1 ATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTA < 2:13955189/137‑1 TCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTAT < 1:1275798/137‑1 CTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATC < 2:3575439/137‑1 CCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATC < 1:16691592/137‑1 CCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATC < 1:9797668/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:3322191/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT < 2:9747199/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:3104022/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT < 1:236783/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:6015981/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:10023202/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:11532402/1‑137 TTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTAC > 2:18836394/1‑137 CAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCC < 1:14165728/137‑1 AGGAGAGCTGAATGCGTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCC < 2:13458979/137‑1 AGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG < 2:3897745/137‑1 TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |