| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 2,586,629 | 39194 bp→CCATTT | PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type)–[PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] | 42 genes PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type), PP_5507 CDS (protein of unknown function), PP_2267 CDS (putative Phage single‑stranded DNA‑binding protein), PP_2268 CDS (Phage endodeoxyribonuclease I), PP_2269 CDS (putative N‑acetylmuramoyl‑L‑alanine amidase), PP_2270 CDS (putative DNA primase_helicase protein), PP_5508 CDS (conserved protein of unknown function), PP_5509 CDS (conserved exported protein of unknown function), PP_5510 CDS (protein of unknown function), PP_2272 CDS (conserved protein of unknown function), PP_5511 CDS (protein of unknown function), PP_2273 CDS (DNA polymerase I from phage origin), PP_2274 CDS (conserved protein of unknown function), PP_2275 CDS (conserved protein of unknown function), PP_2276 CDS (putative phage exonuclease), PP_2277 CDS (conserved protein of unknown function), PP_2278 CDS (conserved protein of unknown function), PP_5512 CDS (protein of unknown function), PP_2279 CDS (Head‑to‑tail joining protein), PP_2280 CDS (conserved protein of unknown function), PP_2281 CDS (putative Capsid assembly protein), PP_5513 CDS (conserved protein of unknown function of phage origin), PP_2282 CDS (Minor capsid protein 10), PP_2283 CDS (Tail tubular protein A), PP_2284 CDS (Tail tubular protein B), PP_5514 CDS (conserved protein of unknown function), PP_2285 CDS (conserved exported protein of unknown function), PP_2286 CDS (conserved protein of unknown function), PP_2287 CDS (Phage internal core protein), PP_2288 CDS (Phage tail fiber protein), PP_2289 CDS (conserved exported protein of unknown function), PP_2290 CDS (conserved protein of unknown function), PP_2291 CDS (conserved protein of unknown function), PP_2292 CDS (conserved protein of unknown function), PP_2293 CDS (DNA maturase B), PP_2294 CDS (conserved exported protein of unknown function), PP_5515 CDS (protein of unknown function), PP_5516 CDS (protein of unknown function), PP_5517 CDS (conserved exported protein of unknown function), PP_2295 CDS (putative antirestriction protein), PP_2296 CDS (conserved protein of unknown function), [PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 2586629 | 2625822 | 39194 | 920 [0] | [2] 1050 | PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type)–[PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] | PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type),PP_5507 CDS (protein of unknown function),PP_2267 CDS (putative Phage single‑stranded DNA‑binding protein),PP_2268 CDS (Phage endodeoxyribonuclease I),PP_2269 CDS (putative N‑acetylmuramoyl‑L‑alanine amidase),PP_2270 CDS (putative DNA primase_helicase protein),PP_5508 CDS (conserved protein of unknown function),PP_5509 CDS (conserved exported protein of unknown function),PP_5510 CDS (protein of unknown function),PP_2272 CDS (conserved protein of unknown function),PP_5511 CDS (protein of unknown function),PP_2273 CDS (DNA polymerase I from phage origin),PP_2274 CDS (conserved protein of unknown function),PP_2275 CDS (conserved protein of unknown function),PP_2276 CDS (putative phage exonuclease),PP_2277 CDS (conserved protein of unknown function),PP_2278 CDS (conserved protein of unknown function),PP_5512 CDS (protein of unknown function),PP_2279 CDS (Head‑to‑tail joining protein),PP_2280 CDS (conserved protein of unknown function),PP_2281 CDS (putative Capsid assembly protein),PP_5513 CDS (conserved protein of unknown function of phage origin),PP_2282 CDS (Minor capsid protein 10),PP_2283 CDS (Tail tubular protein A),PP_2284 CDS (Tail tubular protein B),PP_5514 CDS (conserved protein of unknown function),PP_2285 CDS (conserved exported protein of unknown function),PP_2286 CDS (conserved protein of unknown function),PP_2287 CDS (Phage internal core protein),PP_2288 CDS (Phage tail fiber protein),PP_2289 CDS (conserved exported protein of unknown function),PP_2290 CDS (conserved protein of unknown function),PP_2291 CDS (conserved protein of unknown function),PP_2292 CDS (conserved protein of unknown function),PP_2293 CDS (DNA maturase B),PP_2294 CDS (conserved exported protein of unknown function),PP_5515 CDS (protein of unknown function),PP_5516 CDS (protein of unknown function),PP_5517 CDS (conserved exported protein of unknown function),PP_2295 CDS (putative antirestriction protein),PP_2296 CDS (conserved protein of unknown function),[PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 2586628 | 0 (0.000) | 911 (1.120) +CCATTT |
125/258 | 0.2 | 99.9% | intergenic (+534/‑8) | PP_t39 tRNA (tRNA‑Leu)/PP_2266 CDS (DNA‑directed RNA polymerase_ bacteriophage and mitochondrial type) | –/– |
| ? | AE015451_phaM1 | 2625823 = | 2 (0.000) | intergenic (+1/‑299) | PP_2297 CDS (putative integrative genetic element Ppu40_ integrase)/PP_t40 tRNA (tRNA‑His) | –/– | |||||
Only 100 of 965 total aligned reads displayed.
GGGCCGCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/2586495‑2586628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTGT > AE015451_phaM1/2625823‑2625958 |||||| GCCGCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCctt > 2:6497310/1‑134 CCGCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTT > 1:14556486/1‑137 CAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGA > 2:14973121/1‑137 CAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGA > 1:11777103/1‑137 CAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGA > 1:12089693/1‑137 CTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTT < 1:6354910/137‑1 GACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTC > 1:14097306/1‑137 CCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGT < 2:10394228/137‑1 CCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGT < 1:2717968/137‑1 CCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGT < 1:333311/137‑1 CCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGT < 1:12900635/137‑1 CACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTGTTTGGGACACATTTTCTGATTCGTG < 2:14749146/137‑1 ATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCT > 1:8923958/1‑137 ATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGACTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCT > 1:8298716/1‑137 ATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTGAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCT > 1:16288216/1‑137 TCCAGAGTCGCGGACCCACGATTGGATTCCTTATCGACGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTTGGACACATTTTCTGATTCGTGGCTC < 2:5986672/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTATCGATGCCCTCTGAGATGACCCTTATAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:18124341/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:13795457/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 2:18235785/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 2:10024103/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:10959873/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:6988103/137‑1 TCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC < 1:6633789/137‑1 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 1:15716555/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 1:806949/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG < 2:15451357/137‑1 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 2:17851700/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG > 2:8188448/1‑137 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCG < 1:10580295/137‑1 CCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCAGTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTGTGGGACACAGTTTCTGATTCGTGGCTCG < 1:10001645/137‑1 AGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGG > 2:12049252/1‑137 GAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGC > 2:16766454/1‑137 CGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAG > 2:3107945/1‑137 CGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTC > 1:17631257/1‑129 CGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCCTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAG > 2:2797368/1‑137 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGC > 2:11661172/1‑137 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGC > 1:10445006/1‑137 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGC > 2:7388550/1‑137 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGC > 2:7766736/1‑137 ACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGC > 1:16629917/1‑137 CCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCC < 2:13549263/137‑1 CAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGA < 2:14444973/137‑1 AATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAG < 2:14299728/137‑1 ATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGC < 1:3584161/137‑1 ATTGGATTCATTAGCGATGCCCTCTGAGATAACCCTTCGAGACATCCTTAGAAATGAGTACTTAATGATGATTACTAAGAGATCCATTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGCGC > 2:6957291/1‑137 CGATGCCCTCTGAGGTGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCC > 2:9166600/1‑137 GATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCC > 1:12497858/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA > 1:2461688/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA > 1:8561060/1‑137 TCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAA < 1:5344848/137‑1 GAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACG < 2:3340259/137‑1 GAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACG < 1:15208941/137‑1 GAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACG < 2:17192278/137‑1 GAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACG < 1:17065721/137‑1 GAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACG < 2:13091567/137‑1 GACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCG < 2:933556/137‑1 CCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCTCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGA > 1:5267771/1‑137 CCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGCGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGA > 2:8582261/1‑137 CTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGAC > 1:11229702/1‑137 CTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGAC > 1:13133258/1‑137 CTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGAC > 2:4718987/1‑137 CTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGAC > 2:4196564/1‑137 AGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACC > 2:16289914/1‑137 GACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCG < 2:5403397/137‑1 GACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCG < 2:5768452/137‑1 CCTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACA > 2:509817/1‑137 CTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACAC > 2:2285507/1‑137 CTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACAC > 2:15709174/1‑137 CTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACAC > 2:1653748/1‑137 CTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACAC > 2:3986263/1‑137 CTTAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACAGGGCGGGACACACCGGGACAC > 2:11236771/1‑137 TAGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACAT > 1:13428854/1‑137 AGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATG > 1:12362127/1‑137 AGAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATG > 1:2083504/1‑137 GAAATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGG < 2:10874669/137‑1 AATGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGG > 2:12807897/1‑137 TGATTACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGAC > 1:18765895/1‑137 TACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTT > 1:16839848/1‑137 ACTTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTG > 1:5790739/1‑137 TTAATGATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGG < 1:4979866/137‑1 GATGATTACTAAGAGATCCATTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACG > 2:2432994/1‑137 ATGATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGA < 2:175720/137‑1 GATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAAT > 1:15384126/1‑137 ATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATT > 2:8818031/1‑137 ATTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATT > 1:18424286/1‑137 TTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACTGTGGGCCAACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTT < 2:18458005/137‑1 TTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTT < 1:14843610/137‑1 TTACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTT < 1:3036131/137‑1 ACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAG > 1:9338490/1‑137 ACTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGAAACATGGGGACTCTTGGGACACGAATTTAG > 2:9658965/1‑137 CTAAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGC > 2:12442747/1‑137 AAGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGT > 1:4408875/1‑137 AGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTT < 1:10850936/137‑1 AGAGATCCCTTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTT < 2:13386423/137‑1 TTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGT > 1:9663765/1‑137 TTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGT < 2:11082572/137‑1 TTTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGT < 1:4159550/137‑1 TTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTG < 2:4384229/137‑1 TTTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTG < 2:13982365/137‑1 TTTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTGT < 1:7434878/137‑1 |||||| GGGCCGCGCCAGGGCGCTGTGGGAGACCACATCCAGAGTCGCGGACCCACAATTGGATTCCTTAGCGATGCCCTCTGAGATGACCCTTAGAGACATCCTTAGAAATGATTACTTAATGATGATTACTAAGAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/2586495‑2586628‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGGGACACATTTTCTGATTCGTGGCTCGGGCAGAGTAGGCCCTGAGCGGCGACCGTGGGCCCACCCAAAACGGGGCGGGACACACCGGGACACATGGGGACACTTGGGACACGAATTTAGCGTTGCATAGTGTGT > AE015451_phaM1/2625823‑2625958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |