| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,366,695 | Δ15,777 bp | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | 20 genes [PP_2964 CDS (putative transposase)], tnpC CDS (putative tnpA repressor TnpC), PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity), csoR CDS (putative repressor of copper utilisation proteins), PP_2970 CDS (conserved exported protein of unknown function), PP_2971 CDS (transposase), PP_2972 CDS (conserved protein of unknown function), dgkA‑II CDS (diacylglycerol kinase), PP_2974 CDS (putative sulfatase), PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3), PP_2976 CDS (putative transposase), PP_mr38 ncRNA (ALIL regulatory region), tnpB CDS (Tn4652_ transposase subunit B), PP_2978 CDS (conserved protein of unknown function), PP_2979 CDS (conserved protein of unknown function), PP_2980 CDS (conserved protein of unknown function), tnpS CDS (putative cointegrate resolution protein S), tnpT‑I CDS (putative cointegrate resolution protein T Tn4652), PP_2983 CDS (conserved protein of unknown function), [PP_2984 CDS (conserved protein of unknown function)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3366695 | 3382471 | 15777 | 847 [0] | [1] 840 | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | [PP_2964 CDS (putative transposase)],tnpC CDS (putative tnpA repressor TnpC),PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity),csoR CDS (putative repressor of copper utilisation proteins),PP_2970 CDS (conserved exported protein of unknown function),PP_2971 CDS (transposase),PP_2972 CDS (conserved protein of unknown function),dgkA‑II CDS (diacylglycerol kinase),PP_2974 CDS (putative sulfatase),PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3),PP_2976 CDS (putative transposase),PP_mr38 ncRNA (ALIL regulatory region),tnpB CDS (Tn4652_ transposase subunit B),PP_2978 CDS (conserved protein of unknown function),PP_2979 CDS (conserved protein of unknown function),PP_2980 CDS (conserved protein of unknown function),tnpS CDS (putative cointegrate resolution protein S),tnpT‑I CDS (putative cointegrate resolution protein T Tn4652),PP_2983 CDS (conserved protein of unknown function),[PP_2984 CDS (conserved protein of unknown function)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3366694 | 0 (0.000) | 827 (0.980) | 131/268 | 0.2 | 100% | intergenic (+360/‑1) | PP_2962 CDS (Alcohol dehydrogenase_ zinc‑containing)/PP_2964 CDS (putative transposase) | –/– |
| ? | AE015451_phaM1 | 3382472 = | 0 (0.000) | intergenic (+1/‑28) | PP_2984 CDS (conserved protein of unknown function)/PP_5545 CDS (protein of unknown function) | –/– | |||||
Only 100 of 847 total aligned reads displayed.
TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 2:3765786/137‑1 ATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGC > 1:4361632/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:4471545/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:6364176/1‑137 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA > 1:4144658/1‑137 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 2:14613669/1‑137 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 1:14462501/1‑137 AATTATGACATGCGTTCTGTAAATATATGATTTGAAAGGTTATTCGATATGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAAT < 2:7097836/137‑1 AATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAAT < 1:70365/137‑1 ATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 2:7718363/137‑1 TTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGG < 1:10027730/137‑1 TTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGG > 1:13502225/1‑137 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 1:12181813/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:5443413/137‑1 ATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTNTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGA < 1:16248375/137‑1 TTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAA < 2:3961474/137‑1 CGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATG < 1:2166106/137‑1 CGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATG < 1:17039909/137‑1 TTCTGTAAATATATGATTTAAAAGGCTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAC > 2:10641169/1‑137 TTCTGTAAATATATGATTTAAAAGGCTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAC < 2:10078631/137‑1 TCTGTAAATATATGATTTAAAAGGTTATTTTAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACC < 2:5816659/137‑1 TCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACC < 2:14056994/137‑1 TCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACC < 2:18029494/137‑1 CTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCA < 2:13261838/137‑1 CTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCA < 2:2953828/137‑1 ATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACA < 2:2769750/137‑1 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 1:670092/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 2:14813728/1‑137 AAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGAC < 2:8564259/137‑1 AAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACC > 2:11624241/1‑137 AAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCG < 1:16475797/137‑1 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 1:5385745/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA < 2:17103089/137‑1 TATTCGAGATGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:17259070/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 2:10504309/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:11507554/137‑1 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 2:17587/1‑137 TCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 2:16842123/1‑137 CGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGC > 1:879252/1‑137 CGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGC > 1:7276223/1‑137 CCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAGCAACTCAACAAATGACGACCGACGATTCGCTGATCTA > 2:12240271/1‑137 CCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTA > 2:13862102/1‑137 CGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAA > 1:4987098/1‑137 CGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAA > 1:10766178/1‑137 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 2:9116537/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 1:8546717/137‑1 TGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTGGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGAATCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACG < 2:4245829/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:9736159/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:7886225/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:11108829/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:17926477/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:3933129/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:2333343/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGAACAACTCAACAAATGACGAACGACGATTCGCTGATCTAACGC > 2:6517648/1‑137 TTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCG > 1:3462404/1‑137 TGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGA < 2:15843602/137‑1 TGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGA < 2:16422227/137‑1 TGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGA < 1:16019765/137‑1 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 1:15570776/1‑137 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 2:16221072/1‑137 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:2961244/114‑1 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:176751/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:18795604/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:338450/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:6015513/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA < 1:11784440/59‑1 CCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCT < 1:8979814/137‑1 CACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTG > 2:7407578/1‑137 CACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTG > 2:15310522/1‑137 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:14012934/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:7773832/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:4638731/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 2:6850270/137‑1 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:14355247/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTAGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCACCTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGcg > 1:18586780/1‑135 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC < 2:12532678/137‑1 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 1:2557966/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC > 2:2465398/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC < 1:7542841/137‑1 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC < 1:8356700/137‑1 AGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGG > 1:14775679/1‑137 AGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGG > 2:6000212/1‑137 GTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTT > 1:9478697/1‑137 CTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGG < 1:12773026/137‑1 GCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 2:8193548/1‑137 GCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 1:13096117/1‑137 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTACCGCGCGAGGCATTAGCTGACGTGATCGCGGGTTTGGTGATTGATCAC > 1:15218839/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATTACG > 2:3305318/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG > 2:9520962/1‑137 TTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGA > 2:11929327/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 2:5222089/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 2:18865923/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT < 2:18456079/137‑1 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 2:15579416/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT > 1:10414999/1‑137 CTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCCGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGG > 1:5710192/1‑137 TTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAG < 2:11452608/137‑1 TGGGGGCAGCAGGGCCAGGCAAAATGGACTCGGAATGAACAACTCAAAAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGAATTAGCTGACGTGAGCGCGGGTTCGGTGGTTGCTCAAGAATGGGTCGAGA > 2:13345631/1‑137 GGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGAT < 1:11223619/137‑1 GGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGAAGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGAT > 1:16650256/1‑137 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |