| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,412,992 | Δ35,612 bp | [PP_3026 CDS (putative Phage recombinase)]–PP_5557 CDS (protein of unknown function) | 47 genes [PP_3026 CDS (putative Phage recombinase)], PP_3027 CDS (conserved protein of unknown function), PP_3028 CDS (conserved protein of unknown function), PP_3029 CDS (DNA cytosine methyltransferase family protein), PP_3030 CDS (conserved exported protein of unknown function), prtN CDS (Transcription regulatory protein PrtN), PP_3032 CDS (DNA‑binding protein Roi‑related protein), PP_5552 CDS (conserved protein of unknown function), PP_5553 CDS (conserved protein of unknown function), PP_3033 CDS (putative transcriptional repressor_ CI_C2 family), PP_3034 CDS (putative Regulator protein), PP_3035 CDS (conserved protein of unknown function), PP_5554 CDS (protein of unknown function), PP_3036 CDS (conserved protein of unknown function), PP_5555 CDS (conserved protein of unknown function), PP_3037 CDS (C4‑type zinc finger protein_ DksA_TraR family), PP_3038 CDS (Pyocin R2_PP_ traC domain protein), PP_3039 CDS (conserved protein of unknown function), PP_3040 CDS (Pyocin R2_PP_ holin), PP_3041 CDS (conserved protein of unknown function), PP_3042 CDS (putative Terminase_ large subunit), PP_3043 CDS (conserved protein of unknown function), PP_3044 CDS (Phage portal protein_ lambda family), PP_3045 CDS (putative ClpP protease), PP_3046 CDS (conserved protein of unknown function), PP_3047 CDS (conserved protein of unknown function), PP_3048 CDS (conserved protein of unknown function), PP_3049 CDS (conserved protein of unknown function), PP_3050 CDS (conserved protein of unknown function), gpV CDS (Pyocin R2_PP_ tail spike protein), PP_3052 CDS (conserved protein of unknown function), gpW CDS (Pyocin R2_PP_ baseplate protein), gpJ CDS (Pyocin R2_PP_ baseplate_tail fiber protein), gpI CDS (Pyocin R2_PP_ tail formation protein), PP_3056 CDS (putative Pyocin R2_PP_ tail fiber protein), PP_3057 CDS (putative pectinesterase), PP_3058 CDS (conserved protein of unknown function), PP_3059 CDS (putative tail sheath protein), PP_3060 CDS (putative tail sheath protein), PP_3061 CDS (conserved protein of unknown function), PP_3062 CDS (putative Pyocin R2_PP_ tail length determination protein), gpU CDS (Pyocin R2_PP_ tail formation protein), PP_3064 CDS (Phage tail protein), gpD CDS (Pyocin R2_PP_ tail formation), PP_3066 CDS (Pyocin R2_PP_ lytic enzyme), PP_5556 CDS (putative bacteriophage lysis protein), PP_5557 CDS (protein of unknown function) |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3412992 | 3448603 | 35612 | 1070 [0] | [0] 1070 | [PP_3026 CDS (putative Phage recombinase)]–PP_5557 CDS (protein of unknown function) | [PP_3026 CDS (putative Phage recombinase)],PP_3027 CDS (conserved protein of unknown function),PP_3028 CDS (conserved protein of unknown function),PP_3029 CDS (DNA cytosine methyltransferase family protein),PP_3030 CDS (conserved exported protein of unknown function),prtN CDS (Transcription regulatory protein PrtN),PP_3032 CDS (DNA‑binding protein Roi‑related protein),PP_5552 CDS (conserved protein of unknown function),PP_5553 CDS (conserved protein of unknown function),PP_3033 CDS (putative transcriptional repressor_ CI_C2 family),PP_3034 CDS (putative Regulator protein),PP_3035 CDS (conserved protein of unknown function),PP_5554 CDS (protein of unknown function),PP_3036 CDS (conserved protein of unknown function),PP_5555 CDS (conserved protein of unknown function),PP_3037 CDS (C4‑type zinc finger protein_ DksA_TraR family),PP_3038 CDS (Pyocin R2_PP_ traC domain protein),PP_3039 CDS (conserved protein of unknown function),PP_3040 CDS (Pyocin R2_PP_ holin),PP_3041 CDS (conserved protein of unknown function),PP_3042 CDS (putative Terminase_ large subunit),PP_3043 CDS (conserved protein of unknown function),PP_3044 CDS (Phage portal protein_ lambda family),PP_3045 CDS (putative ClpP protease),PP_3046 CDS (conserved protein of unknown function),PP_3047 CDS (conserved protein of unknown function),PP_3048 CDS (conserved protein of unknown function),PP_3049 CDS (conserved protein of unknown function),PP_3050 CDS (conserved protein of unknown function),gpV CDS (Pyocin R2_PP_ tail spike protein),PP_3052 CDS (conserved protein of unknown function),gpW CDS (Pyocin R2_PP_ baseplate protein),gpJ CDS (Pyocin R2_PP_ baseplate_tail fiber protein),gpI CDS (Pyocin R2_PP_ tail formation protein),PP_3056 CDS (putative Pyocin R2_PP_ tail fiber protein),PP_3057 CDS (putative pectinesterase),PP_3058 CDS (conserved protein of unknown function),PP_3059 CDS (putative tail sheath protein),PP_3060 CDS (putative tail sheath protein),PP_3061 CDS (conserved protein of unknown function),PP_3062 CDS (putative Pyocin R2_PP_ tail length determination protein),gpU CDS (Pyocin R2_PP_ tail formation protein),PP_3064 CDS (Phage tail protein),gpD CDS (Pyocin R2_PP_ tail formation),PP_3066 CDS (Pyocin R2_PP_ lytic enzyme),PP_5556 CDS (putative bacteriophage lysis protein),PP_5557 CDS (protein of unknown function) |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3412991 | 0 (0.000) | 1039 (1.260) | 143/262 | 0.0 | 100% | coding (1/1626 nt) | PP_3026 CDS (putative Phage recombinase) | |
| ? | AE015451_phaM1 | 3448604 = | 0 (0.000) | intergenic (‑472/‑199) | PP_5557 CDS (protein of unknown function)/PP_3067 CDS (conserved protein of unknown function) | –/– | |||||
Only 100 of 1070 total aligned reads displayed.
ATCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3412853‑3412991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaCGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGGGGC > AE015451_phaM1/3448604‑3448739 CAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTAC < 2:2025882/137‑1 TCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGC < 2:4263887/137‑1 TCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGC < 2:7580353/137‑1 TCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGC < 2:6752277/137‑1 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 1:16397268/1‑137 TCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGG > 1:15141482/1‑137 TTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGT < 2:3888303/137‑1 TTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGGTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGT < 1:17520161/137‑1 GATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAG > 2:11495870/1‑137 ATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGT < 1:7868387/137‑1 TGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTT < 2:17276455/137‑1 TGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGG > 2:14398092/1‑137 TGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGG > 2:5201884/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:7781487/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:12853151/1‑137 GTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTGGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGA > 2:15282276/1‑137 TTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGAT < 1:14411939/137‑1 TTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGAT < 1:4780513/137‑1 TGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAG < 1:9366403/137‑1 TGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAG < 1:3460715/137‑1 GATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTAATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAG > 2:11944376/1‑137 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 2:18795499/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 1:5519049/137‑1 ATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGG < 2:2349461/137‑1 CAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTG < 1:3755226/137‑1 CAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTG < 1:14213692/137‑1 CAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTG < 2:8679490/137‑1 AATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGG < 2:17761102/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:18264701/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 2:16729374/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:8707863/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:6375285/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT > 1:16139101/1‑137 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:10915889/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:17087825/137‑1 ATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGT < 1:3070750/137‑1 CAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGA < 2:11022593/137‑1 CAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGA < 2:8431313/137‑1 CAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGA < 2:16038270/137‑1 AGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAG < 1:10001992/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGTAGGTGGTACGGAGCTGTG < 2:15020896/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 1:12744316/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 2:931560/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 2:9690627/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG > 1:13537281/1‑137 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 2:2733565/137‑1 GCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTG < 2:6559371/137‑1 CTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGG < 2:17104348/137‑1 CTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGG < 2:10871211/137‑1 GGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCA > 1:8357631/1‑137 CTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATG < 1:16824767/137‑1 TGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGC > 1:15847567/1‑137 TGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTT > 1:6617282/1‑137 GGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTG < 2:4681978/137‑1 GCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGG > 1:13257159/1‑137 CGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGT > 2:302755/1‑137 GCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTT > 2:16439744/1‑137 GCTCATGTGTTTTTGGGCGTGGCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTGGGAGTGAAAGCAGGGTACGGCTGGAGTAGGTGGGCTGATAGAGGAGGTGGTACGGAGCGGTGGGCGTGCCTTGGTTTG < 1:6898871/137‑1 TGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGA < 2:1263924/137‑1 CGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAA > 1:5037021/1‑137 GTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATA > 1:9754114/1‑137 GTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATA > 1:10524163/1‑137 CCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACG > 2:13369296/1‑137 CCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACG < 2:17471611/137‑1 GGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGAT > 1:13695423/1‑137 GGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGAT > 2:4804951/1‑137 AAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATC < 2:3490784/137‑1 GGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCAT < 1:2771124/137‑1 GGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCAT < 1:9127745/137‑1 AATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAT > 1:14639860/1‑137 ATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTT < 1:4392329/137‑1 TCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGA > 2:10512441/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 1:1861828/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 1:11911629/1‑137 CTGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCAGGAGTAGGTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCACTCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAG > 2:14061118/1‑137 TGGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGC > 2:12354124/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 2:6106285/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 1:17946383/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 2:9051662/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 2:14763296/1‑137 GGCTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCT > 1:2005652/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGCAAAATACGATCATCACCAATGGCTTAGGTGCTTT > 1:6024376/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 1:15370513/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 1:3989592/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 1:525642/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 1:7322804/1‑137 CTTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTT > 2:10106503/1‑137 TTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTC > 1:2396067/1‑137 TTTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTC > 1:10333180/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 1:5853919/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 2:7245126/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCC > 1:8044060/1‑137 TTCCCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCATTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAACGGCTTAGGAGCTTTCC > 1:11479118/1‑137 CCGGTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCT > 1:12267134/1‑137 GTTGGAGTGAAATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGG < 2:16878308/137‑1 AATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAA < 2:5543982/137‑1 AATCAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAA < 2:18249735/137‑1 CAGGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTAGTACGGAGCTGTAAACATGCCGTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGA < 2:15757393/137‑1 GGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACG < 2:13756807/137‑1 GGGTACGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAAGGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACG < 1:7462363/137‑1 ATCCAGTCATCATTGATGATGTCGTTTGGATTTTCAATCCCCAGGCAGCTAGGCTGTTGGCGCGCTCATGTGTTTTTTGGCGTGTCCGGTGAAGGGTAATATATACTCTGGCTTTCCCGGTTGGAGTGAAATCAGGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3412853‑3412991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtaCGGCCGGAGTAGTTGGGCTGATAGAGGAGGTGGTACGGAGCTGTGGGCATGCCTTGGTTTGATGCTGAATTTAGAAAAATACGATCATCATCAATGGCTTAGGAGCTTTCCGCTTGGTCGGAAGCAATGACGGGGC > AE015451_phaM1/3448604‑3448739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |