| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 6,159,202 | Δ6,596 bp | PP_5404 CDS (Transposition protein_ TnsC‑related protein)–PP_5407 CDS (Transposition protein_ TnsD‑related protein) | PP_5404 CDS (Transposition protein_ TnsC‑related protein), PP_5405 CDS (transposase), PP_5406 CDS (transposase), PP_5407 CDS (Transposition protein_ TnsD‑related protein) | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 6159202 | 6165797 | 6596 | 964 [0] | [0] 965 | PP_5404 CDS (Transposition protein_ TnsC‑related protein)–PP_5407 CDS (Transposition protein_ TnsD‑related protein) | PP_5404 CDS (Transposition protein_ TnsC‑related protein),PP_5405 CDS (transposase),PP_5406 CDS (transposase),PP_5407 CDS (Transposition protein_ TnsD‑related protein) |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 6159201 | 0 (0.000) | 951 (1.130) | 139/266 | 0.1 | 100% | intergenic (+21/+2) | PP_5403 CDS (conserved protein of unknown function)/PP_5404 CDS (Transposition protein_ TnsC‑related protein) | –/– |
| ? | AE015451_phaM1 | 6165798 = | 0 (0.000) | intergenic (+3/+591) | PP_5407 CDS (Transposition protein_ TnsD‑related protein)/PP_5408 CDS (conserved protein of unknown function) | –/– | |||||
Only 100 of 968 total aligned reads displayed.
ATCGCTTACCTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/6159064‑6159201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGTTTAAGAATTAGGC > AE015451_phaM1/6165798‑6165933 ATCGCTTACCTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACA > 1:4615266/1‑137 TCGCTTACCTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACAT < 2:13382922/137‑1 CGCTTACCTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATT < 1:13470246/137‑1 CTTACCTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTT > 1:7752447/1‑137 TTACCTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTT > 1:15303079/1‑137 CTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACG < 1:5605219/137‑1 CAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGAT < 2:14249782/137‑1 AAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCTTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATT < 2:12783206/137‑1 AGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTG < 1:5318017/137‑1 CAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGAC > 2:16345674/1‑137 CAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGAC > 1:1149015/1‑137 CAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGAC > 1:14669723/1‑137 CAAGAGCGGCGCATAACCAACATGTTTAAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGCCTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGAC > 1:9932481/1‑137 AGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTG < 2:233440/137‑1 GAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGT < 2:10216313/137‑1 GGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACT > 1:2617520/1‑137 GGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACT > 1:9251596/1‑137 GGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACT > 2:1370350/1‑137 GGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACT > 2:14083271/1‑137 GGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACT > 1:11135162/1‑137 GGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACT > 2:1872047/1‑137 GCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTT < 2:14700931/137‑1 ATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTAC > 1:7348647/1‑137 ATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTAC > 2:6607707/1‑137 ATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTAC < 1:10449921/137‑1 ATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTAC < 1:11856651/137‑1 AACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGA < 1:6503505/137‑1 AACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGACGACTTCGTCCTCGCTTCCAGGGATGACTTTTTCCTTGATGGTCATTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGA < 1:17327140/137‑1 CCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGC < 2:12179802/137‑1 TGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGG < 1:305045/137‑1 TGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGG < 2:17221290/137‑1 TGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGG < 1:14229828/137‑1 GTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGG < 1:2330820/137‑1 TTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGA < 2:17023093/137‑1 TTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGA < 1:7045877/137‑1 TTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAA < 2:8596137/137‑1 GAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATA < 2:6144350/137‑1 GAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATA < 1:15964546/137‑1 AGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACG > 1:16789063/1‑137 AGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACG > 1:596429/1‑137 AGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACG > 2:18079762/1‑137 GGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGG < 2:1994829/137‑1 TGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTT < 2:8381828/137‑1 TCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCATGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACA < 1:15520440/137‑1 CACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATA > 2:12647655/1‑137 CACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATA > 1:13027985/1‑137 CACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATA > 2:3887904/1‑137 CACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATA > 1:3960735/1‑137 CAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATG < 2:3103446/137‑1 AGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTG > 2:5700133/1‑137 GCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGT > 2:5898894/1‑137 GCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAA < 1:9690445/85‑1 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 2:7534958/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 2:16139728/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 2:12995719/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 2:7797685/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 1:3664322/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 2:11923739/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 1:5132557/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 1:10896021/1‑137 GAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCT > 1:16360767/1‑137 ATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGG < 2:15175812/137‑1 TGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGA < 2:5005503/137‑1 CGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGC < 2:16628670/137‑1 CGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGC < 1:17040161/137‑1 GCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCC < 2:5506828/137‑1 CCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCT > 1:10711574/1‑137 CCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCT > 2:9371723/1‑137 TCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCA > 1:6719302/1‑137 TCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATAACTGTAGCTTGGGAAAAGGCCCTCA > 2:14859211/1‑137 TTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCT > 2:11264470/1‑137 TGACTTTTTTCGTGATGTTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGGACGAGCTCACGGGAATACGTTTACATCTGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTT < 2:9214521/137‑1 ACTTTTTCCGTGATGGTCACTGATTTGAAAGCCCAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTT > 1:18128803/1‑137 ACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTT > 2:4281493/1‑137 ACTTTTTCCGTGATGGTCAATGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTT > 2:3454261/1‑137 TTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTT > 2:7216/1‑137 CGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTA < 2:10762624/137‑1 CGTGATGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTA < 1:4457302/137‑1 TGGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGT < 1:14822740/137‑1 GGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTG < 1:17864148/137‑1 GGTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTG < 1:1985293/137‑1 gtcaagGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTAATTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAACAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGA > 2:3656220/7‑137 GTCACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGA < 2:691871/137‑1 ACTGATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTA > 1:12783225/1‑137 GATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACT < 1:11933334/137‑1 GATTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAAGACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACT < 1:13708285/137‑1 TTTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCC > 2:17546635/1‑137 TTGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCT < 2:4613611/137‑1 TGAAAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTT > 2:6413250/1‑137 AAGCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGC > 1:18693547/1‑137 AGCCAAGCTGGACATTTTTAACGATTGACTG‑TACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGT < 1:13974574/137‑1 GCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGT < 1:12247389/137‑1 GCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGT < 1:10011409/137‑1 GCCAAGCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGT > 1:8552199/1‑137 GCTGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATGCGGTTACATATGACTTTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGGAACTCCGTAGCGgggaag < 2:15720266/137‑7 TGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGTTTAAGAA > 1:8908748/1‑137 TGGACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGTTTAAGAA > 1:8228636/1‑137 GACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGTTTAAGAATT < 2:2555921/137‑1 GACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGTTTAAGAATT < 2:13246602/137‑1 ACATTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGTTTAAGAATTA < 1:3257657/137‑1 ATCGCTTACCTCAAGCAAGAGCGGCGCATAACCAACATGTTTGAAGGTGATCCACAGCAGCCCGAGGATGACTTCGGCCTCGCTTCCAGGGATGACTTTTTCCGTGATGGTCACTGATTTGAAAGCCAAGCTGGACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/6159064‑6159201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atTTTTAACGATTGACTGTTACTTGTACGAGCTCACGGGAATACGGTTACATATGACTGTAGCTTGGGAAAAGGCCCTCAATCTATGGCACTTTTTTGATTTATGCGTGAGTAACTCCTTAGCGTTTAAGAATTAGGC > AE015451_phaM1/6165798‑6165933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |