Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AE015451_phaM1614,2850AC29.6% 374.6 / 44.9 245intergenic (‑104/+74)dxs CDS (1‑deoxyxylulose‑5‑phosphate synthase)/ispA CDS (farnesyl diphosphate synthase)–/–
Reads supporting (aligned to +/- strand):  ref base A (39/123);  new base C (66/2);  total (120/125)
Fisher's exact test for biased strand distribution p-value = 2.99e-27
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 245 total aligned reads displayed.

GCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCG  >  AE015451_phaM1/614152‑614419
                                                                                                                                     |                                                                                                                                      
  gggggATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCcgc                                                                                                                                   >  1:8870685/1‑137 (MQ=255)
      gATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAAt                                                                                                                               <  1:12410280/137‑1 (MQ=255)
           ctTGAAACGTCGTGGGCATCAGGCGANTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          <  1:18625482/137‑1 (MQ=255)
           ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGTTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          <  2:14243568/137‑1 (MQ=255)
           ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTTTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          <  1:11898001/137‑1 (MQ=255)
           ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCNCAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAACGCGTc                                                                                                                          >  1:15243728/1‑137 (MQ=255)
           ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCTGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          <  1:11897959/137‑1 (MQ=255)
           ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          <  1:11197403/137‑1 (MQ=255)
           ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          <  1:3631414/137‑1 (MQ=255)
           cgtGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGGAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          <  1:12156970/135‑1 (MQ=255)
               aaaCGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCa                                                                                                                      <  2:5094118/137‑1 (MQ=255)
                     cgtGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCa                                                                                                                <  1:6447850/137‑1 (MQ=255)
                     cgtGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCa                                                                                                                <  2:1690408/137‑1 (MQ=255)
                        gggCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGa                                                                                                             <  2:159344/137‑1 (MQ=255)
                         ggCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGGTTTCCCGCGAATGTGTTGGCAAACTccaaag                                                                                                            >  1:791982/1‑132 (MQ=255)
                          gCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                           <  1:14076842/137‑1 (MQ=255)
                            aTCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGc                                                                                                         <  2:11865473/137‑1 (MQ=255)
                             tCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCa                                                                                                        <  1:2643464/137‑1 (MQ=255)
                             tCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCa                                                                                                        <  2:15293570/137‑1 (MQ=255)
                             tCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCa                                                                                                        <  2:18220421/137‑1 (MQ=255)
                              cAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCAt                                                                                                       <  2:5357602/137‑1 (MQ=255)
                                ggCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGTGGCTGGAAACTCCAGATcctactc                                                                                                     >  1:5523006/1‑131 (MQ=255)
                                 gCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGAAAATTCAAGATCGCATTcg                                                                                                    >  2:11405655/1‑137 (MQ=255)
                                      tCGTTATGGGTGTGTGAAGCCGCTGCAGTTTACCCCATTTTTGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGTGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGt                                                                                               <  2:18116299/137‑1 (MQ=38)
                                      tCGTTATAGTTGTGGGAAGACGCGGCAGTTTGCCCCATTTGGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTGGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGACCGCATTCGCggtt                                                                                               <  2:16646264/137‑3 (MQ=38)
                                      tCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCGTTCGACCACAGGTTACGCGGCCCCCTGTGGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTAAAGATCGCATTCGCgggg                                                                                               <  1:16505754/137‑2 (MQ=255)
                                       cGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCTCGAACGCGTCGGTAAACTCCAAATCGCCCTCGCAGGTa                                                                                              >  2:5144549/1‑137 (MQ=255)
                                        gttgtcggTGTGTGAAGACGCTACATTTTACCCCATTTTGGGAAAAGTGCCCATTCGACCACATGCCCCGCGGCCCCCTGTAGGATCGGTTTTACCCGCGAAGGCGTCGGCAAATTCAAGATCACATTCGCGGGTaa                                                                                             <  2:13830631/131‑1 (MQ=255)
                                        gtgagaGGGGTGTGAAGACGCGGCAGTTGACCCCATTGTGGGAAAAGTGCCCATTCGACCACGGGTGNCGCGGCCCCTTGTAGGATTGGGTTTACCCGCGAGTGCGTCGGCAAATTCAAGATCACATTCGCGGGTaa                                                                                             <  1:16266192/132‑1 (MQ=255)
                                        gTTATAGGTGTGTGAAGACGCAGCAGTTTACCCCATTTTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATTGGTTTTACCTGCGAATGCGTCGGCAAATTCAAGATCACATTCGCGGGTaa                                                                                             <  2:7014318/137‑1 (MQ=39)
                                         ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGACAATTCAAGATCTCATTCGCGGGTcaa                                                                                            >  1:9312190/1‑137 (MQ=255)
                                         ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCACGAATGCGTCGGGAAATTCAAGATCACATTCGCGGGTaaa                                                                                            >  2:294853/1‑137 (MQ=255)
                                           ataGGTGTGTGAAGACGCGGCAGTTTACCCCGTTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGAAAGTTCAAGATCGCATTCGCGGGTAAAcc                                                                                          <  2:7219418/137‑1 (MQ=255)
                                           ataGGTGTGTGAAGACGCGGAAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTAAGCGGCCCCCTGGAGGATCGGGTTTACCCGCGAATGCGCCGGAAAATTCAAGATCACATTCACGGGCAAAcc                                                                                          <  2:15550110/137‑1 (MQ=255)
                                            gaGGTTTGGGAGGACGCGGCAGTTTCCCCCATTGGGGGAAAAGTGCCCATTCGACCACAGGTGACGCGTCCCCCTGGAGGGTTGGGTTCACCCGAGAATGCGTTGGCAAATCAAAGATCGCATTTGCGGGGAAAccc                                                                                         <  1:3202350/136‑1 (MQ=255)
                                                  tgtgAAGACGTGGCGGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGTGGCCCCTTGGAGGGTTGGGTTCACCCGCGAATGTGTTGGAAAGTTCAAGATCGCGTTCGCGGGGAAACCCGATCCt                                                                                   <  1:17559382/137‑1 (MQ=255)
                                                  tgtgAAGACGCGGCAGTTTACCCCCTTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCACGAATGCGTTGGCAAATTCAAGATTGCACTCGATGGTGAAACCGATcat                                                                                   >  2:8954790/1‑135 (MQ=255)
                                                  tgtgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTTCCCACTAATCCGTCTGCCAATTCCAAATCGACCTTGCGGGTAAAACCTATCCt                                                                                   >  1:10136007/1‑137 (MQ=255)
                                                     gAAGACGCGGCAGTTTACCCCATTTTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGTCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACa                                                                                <  2:3942343/137‑1 (MQ=255)
                                                     gAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTCGGATCGGGTTTTCCCTCCAATGTTTTGGTGAATTTCAAATCTCACTCTAGGGTAAACCCGATTCTCCa                                                                                >  1:70773/1‑137 (MQ=255)
                                                     gAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTGCCCGCGAAGGCGTTGGCAAACTCAAAATTGCATTCGCGGGTAAAACCGATCCTaaa                                                                                >  2:15360347/1‑135 (MQ=255)
                                                     gAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGCAAACTCCAGACCGCATTCGCGGGTAAAACCACTCCTCCa                                                                                >  1:17782235/1‑137 (MQ=38)
                                                     gAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCACCACGAATGCGTCGGCAAATTCAAGATCGCATTCTCGGGTAAACCCAATCCTCCa                                                                                >  1:15920466/1‑137 (MQ=38)
                                                     gAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTc                                                                                                                          >  1:14279977/1‑95 (MQ=255)
                                                     gAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAAGTCCAAATCTCATTCTCGGGTCAACCCTATCCTCCa                                                                                >  1:9599469/1‑137 (MQ=38)
                                                     gAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGGTTCCCCCCGAACGCGTCGGCAAACTCAAGATCGCATTCGCGGGTAAAACCGATCCTCCa                                                                                >  2:9714157/1‑137 (MQ=255)
                                                     gAAGACGCGACATTTTACCCCATTTTGGGAAAAGGTCCCATTCGACCACAGGTTACTCGGCCCCCTGTAGGGTCGGGTTTACCCGCGAATGCGTCGGCAACTTCAAGCTCAAATGCGCGGGTAAACCCGATCCTACa                                                                                <  2:1064597/137‑1 (MQ=37)
                                                      aaGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGTGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAg                                                                               >  2:4471720/1‑137 (MQ=255)
                                                      aaGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCACAAATGCGTCGGAAAACTCCAGACCGCATTCACGGGTAAACCCAATCCTACaa                                                                               >  1:8577928/1‑136 (MQ=255)
                                                      aaGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATTCGTTGGAAAATTCAAGATCTAATTCTTGGGTAAACCCGATCCttaag                                                                               >  2:16141869/1‑133 (MQ=255)
                                                       aGATGCGGCGGTTTACCCCATTGTGGGAAAAGTGCCCATTCGCCCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTGACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAgg                                                                              <  2:8047404/137‑1 (MQ=255)
                                                       aGACGCGGCGGTTTACCCCGTTGGGGGAAGAGTGCCCATTCGACCACGGGTTACGTGGCCCCCTGGAGGATTGGGTTTACCCGCGAGGACGTCGGCAAATTCAAGATTGCATTTGAGGGGAAACCCGATCCTACAgg                                                                              <  1:5961750/137‑1 (MQ=255)
                                                       aGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCTAATGCGTCAGCAAACTCAAGATCGCCTTCGTGGGTAAAACCGATCCtcaagg                                                                              >  2:2091055/1‑132 (MQ=255)
                                                       aGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCACTGTAGGATCGGGTTTACCCGCGAATGGGTTGGCAAATTCCAGATCGCATTCGCGGGTAAACCCGATCCTACAgg                                                                              >  2:8419269/1‑137 (MQ=255)
                                                            cgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGCAAATTCCAGATCGCATTCGCGGGTAAACCCAATCCTCCCGGGGTAg                                                                         >  1:9061356/1‑137 (MQ=38)
                                                            cgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGTGGGTAAACCCGATCCTACAGGGATAg                                                                         <  2:8792454/137‑1 (MQ=255)
                                                            cgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCAAAGGTTACGCGGCCCCCTGTAGGATCGGGCTTCACCACGAAGGTGTCAGAAAAATCAAGATCGCATTCGCGGGTAAACCCGACCCTACAGGGagag                                                                         >  1:6686053/1‑137 (MQ=255)
                                                             ggCATTTTACCCCATTGTGGGAAAAGTGCCCGTTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGGAAACCCGATCCTACAGGGATAgg                                                                        <  2:6944561/137‑1 (MQ=255)
                                                               cAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAACGTGTTGGTAAACTCCAAATCTCATTCTCGGGTAAACCCCATCCTACAGGggtgggtg                                                                      >  1:6338944/1‑137 (MQ=255)
                                                               cAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGTCAAATTCAAAATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTg                                                                      <  2:13164969/137‑1 (MQ=255)
                                                               aattttACCCCATTGTGGGAAAAGTGCCCATTCGACAACGGGTGATGCGTCCCCCTGGAGGAGCGGGTTGACCTGAGAATGTGTTGGAAAATTCAGGATCGCCTTCGAGGGGAACCCCGATCCTACAGGGATAGGTg                                                                      <  2:1360903/134‑1 (MQ=255)
                                                                 gTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCACGAAGGCGTCGGCAAAGTCAAAATCGCATTCGCGGGTAAACCCGATCCTCAAGGGATAGGTGaa                                                                    >  2:10144610/1‑137 (MQ=38)
                                                                  tttACCCCATTGTGGGAAAAGTGCCCATTCGACCAAAGGTTACGCGGCCCCCTGTAGGGTTGGGTTTACCCGCGAATGCGGCGGCAAATTCAAGATCGCATTCGTGGGTAAACCCGATCCTACAGGGATAGGTGAAg                                                                   <  1:14631865/137‑1 (MQ=38)
                                                                   ttACCCCATTTTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGGCGGCAAATTCAAGATCGCATTAGCGGGGAAACCCGATCCTACAGGGATAGGTGAAGc                                                                  <  2:14299305/137‑1 (MQ=255)
                                                                            tgtgGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCACGAACGCGTCGGCAAACTCAAAACCGCATTCCCGGGTAAACCCAATCCCCCAAGGAGAGGTGAAGATGGTTAGtt                                                         >  1:17686779/1‑137 (MQ=255)
                                                                              tgGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGCAAATTCCAGATCGCATTCGCGGGTAAACCCAATCCTACAGGGATAGGTGAAGATGTTTCGTTAc                                                       >  2:14996336/1‑137 (MQ=38)
                                                                               gggAAAAGTGCCCATTCGACCACGGGTTACGTGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACg                                                      <  2:6442346/137‑1 (MQ=255)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCTTGTAGGGTCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTTGTGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACg                                                      <  1:372792/137‑1 (MQ=255)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGCAAACTCAAAACCGCATTCGCGGGTAAACCCAATCCTCCAGGGAGAGGTGAAGATGTTTAGTTACg                                                      >  2:7160029/1‑137 (MQ=37)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGAAAACTCAAGATCACATTCACGGGTAAACCCGATCCTCCCGGGAGAGGTTAAGATGTTTCGTTCCg                                                      >  1:6214494/1‑137 (MQ=255)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCa                                                                                                        >  1:10757270/1‑87 (MQ=255)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCa                                                                                                        <  1:7462234/87‑1 (MQ=255)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCa                                                                                                        <  2:10757270/87‑1 (MQ=255)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCAATCCTAAAGGGATAGGTGAAGCTGTTTAGTTACg                                                      >  2:7498395/1‑137 (MQ=255)
                                                                               gggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGGTTCCCCGCGAATGCGTCGGCAAATTCCAGATCGCATTCGCGGGTAAACCCAACCCTACAGGGATAGGTGAAGCTTTTTCGttcca                                                      >  2:665034/1‑134 (MQ=37)
                                                                               gggAAAAGTGCCCATTCGACCAAAGGTTACGCGGCCCCTTGTGGGATCGGTTTTACCCGCGAATGCTTCGGCAAATCCAAGATCGCATTTGCGGGCAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACg                                                      <  1:6090734/137‑1 (MQ=255)
                                                                               gggAAAAGTGCCCATTCAACCAAAGGTTACGCGGCCCCCTGTAGGGTTGGGTTTACCCGCGAGTGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACg                                                      <  1:14948255/137‑1 (MQ=38)
                                                                                 gAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCGGTAGGATCGGGTTGACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGc                                                    <  2:17414492/137‑1 (MQ=255)
                                                                                   aaaGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGGAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGt                                                  <  2:18606168/137‑1 (MQ=255)
                                                                                   aaaGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGGTTGCCCGCGAATGCGTTGGAAAATTCAAGATCGCATTCGCGGGTAAAACCGATCCCACAAGGAGAGGTGAAGATGTTTGGTTCCGGCGt                                                  >  1:6853602/1‑137 (MQ=255)
                                                                                    aaGTGCCCATTCGACCACAGGTTACGCGACCCCCTGGAGGATCGGGGTTACCCGCGAATGCTTCGGCAAATTAAAGCTCACATTCGCGGGCAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGtt                                                 <  2:5932865/137‑1 (MQ=255)
                                                                                          ccATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAAATCTCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTTCGGTGTTTGACaa                                           >  2:15454901/1‑137 (MQ=38)
                                                                                           cATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGTGTCGGCCAACTCAAGATCGTATTCGCGGGTGAACCCGATCCTCCAGGGATAGGTGAAGATGGTTAGTTCCGGGGTTCGACaac                                          >  1:13798407/1‑136 (MQ=255)
                                                                                                     aaGGTTACGCGGCCCCCTGGAGGATCGGGTTTACCCGCGAAGGCGTCGGAAAATTCAAGATCGCATTCGCGGGGAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGcc                                <  2:6853602/136‑1 (MQ=255)
                                                                                                       ggTTACGCGGCCCCCTTTATGATCGGTTTTACCCGCGAATGCGTTGGCAAATTCAAGGTCGCATTCGCGGTTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCaa                              <  2:17614625/137‑1 (MQ=39)
                                                                                                        gTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGTGTCGGCAAATTCAAGATCGCATTCGCGGGTCAACCCAATCCTACAGGGGGAGGTGAAGATGTTTGGTTGAGGCGTTCGACAATATAACGCGCCaaa                             >  1:17444896/1‑136 (MQ=38)
                                                                                                         ttACGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGCAAATTTAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAgg                            >  2:9545205/1‑137 (MQ=255)
                                                                                                           aCGCGGCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCAATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGcc                          >  2:12554482/1‑137 (MQ=255)
                                                                                                            ctcgGCCCCCGGTAGGATCGGTTTTACCCTCGAATGCGTCGGCAAATTCAAGCTCGCATTCGCGGGGAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGccc                         <  2:14639045/135‑1 (MQ=38)
                                                                                                               ggCCCCCTGTAGGATCGGGTTTCCCCGCGAATGCGTCGGAAAATTCAAGATTGCATTTGCGGGTCAACCCGATCCTAAAGGGGGGGGTGAAGATGTTTAGTTCCGGTGTTCGAACATATAACGCGCCCAGGCCCGCa                      >  2:3747563/1‑137 (MQ=255)
                                                                                                               ggCCCCCTGTAGGATCGGGTTTCACCGCGAATGCATCGGCAAACTCAAAACCACCCTCGCGGGTAAACCCAACCCTACAGGGATAGGTGAAGATGTTTCGTTCCGGCGTTCGACAATATCCCACGCCCAAGCCcaca                      >  1:17997255/1‑137 (MQ=255)
                                                                                                                    ccTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGTGTCAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGc                 >  2:11003702/1‑137 (MQ=255)
                                                                                                                    ccTGTAGGATCGGGTTTACCCGCGAATGCGTCGGAAAATTCAAAATCGAATTCGCGGGTAAAACCGATCCTAAAGGGATAGGTGGAGCTGTTTAGTTACGGCGTTTGAAAATATGACGCGCCAAGGCCCGCAGCGGc                 >  2:4029384/1‑137 (MQ=37)
                                                                                                                                ggTTTCCCCCCGAATGCGTCGGCAAATCCAAGATCGCATTCACGGGGAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCg     <  1:18229874/137‑1 (MQ=255)
                                                                                                                                ggTTTCCCCACGAATGCGTCGGCAAATTCAAGATCGCACTCGCAGGTAAACCCAATCCTAAAAGGATAGGTGAAGATGTTTCGTTCCGGCGTTCGACAACATAACGCGCCAAGGCCCACAGCGGTTCGGCCTTTTct     >  2:6313725/1‑136 (MQ=255)
                                                                                                                                ggTTTACCCGCGAATGTGTCGGCAAATTCAAGATCGCATTCGCGGGGAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCg     <  2:2468194/137‑1 (MQ=255)
                                                                                                                                  tttACCCGCGGATGCGTTGGCAAATTCCAGATCGCATTTGTAGGTCAACCCGATCCTACAGGGATAGGTGGAGACGTTTAATTACGGCGTTCGACAATGTAAAACGCCCAGGCCCGCAGCAGCTCGGCCTTTTctgc   >  2:14724580/1‑134 (MQ=255)
                                                                                                                                   ttACCCGCGAATGCGTTGGAAAATTCAAGATCGCATTCGCGGGTAAACCCGACCCTAAAGGGAGAGGTGAAGATGTTTAGTTACGGCGTTCAAAAACATAACGCGCCCAAGCCCACCGCGGTCCGGACCTTTTGcca  >  2:4760789/1‑136 (MQ=19)
                                                                                                                                   ttACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTAAAGGGATAGGTGAAGCTGTTTAGTTACGGAGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCg  >  2:2831165/1‑137 (MQ=255)
                                                                                                                                   ttACCCGCGAATGCGTCGACAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCg  <  2:12879393/137‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                      
GCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCG  >  AE015451_phaM1/614152‑614419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑