| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451_phaM1 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 CDS (Monooxygenase_ DszC family) ← / ← sctC CDS (sulfur compound ABC transporter ‑ ATP‑binding subunit) | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451_phaM1 | 278,742 | 1 | . | A | 94.8% | 2786.3 / 143.9 | 881 | intergenic (‑237/+77) | PP_0224 CDS (Monooxygenase_ DszC family)/sctC CDS (sulfur compound ABC transporter ‑ ATP‑binding subunit) | –/– |
| Reads supporting (aligned to +/- strand): ref base . (5/39); new base A (450/355); total (486/395) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.69e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1039 total aligned reads displayed.
TGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTC > AE015451_phaM1/278608‑278872 | tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aa < 1:2844877/137‑1 (MQ=255)tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aa < 1:10673151/137‑1 (MQ=255)tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aa < 2:18018141/137‑1 (MQ=255)tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aa < 2:3760274/137‑1 (MQ=255)tGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aa < 1:1751246/137‑1 (MQ=255) gATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaa < 1:5011686/137‑2 (MQ=255) aTCGCGACAGACGTGTGCTGTTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaac < 1:12696023/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaac < 2:9668541/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaac < 2:4283939/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaac < 1:6739580/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaac < 2:7010993/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaac < 1:14404367/137‑3 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaac < 2:12694910/137‑3 (MQ=255) tCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaacc < 1:11635739/137‑4 (MQ=255) tCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaacc < 1:11066276/137‑4 (MQ=255) gcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaacccg < 2:10826983/137‑6 (MQ=255) gcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaacccg > 2:17626636/1‑132 (MQ=255) gcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aaacccg > 2:12387826/1‑132 (MQ=255) gACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCt > 2:7313951/1‑137 (MQ=255) gACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCt > 1:3573082/1‑137 (MQ=255) cAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTcc > 1:8293649/1‑137 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTac < 2:11645209/137‑1 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTac < 1:2652684/137‑1 (MQ=255) tgtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTacaca < 2:14212609/137‑1 (MQ=255) tgtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTacaca < 1:12279905/137‑1 (MQ=255) tgtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTacaca < 1:4662354/137‑1 (MQ=255) gtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTacacac < 1:2210630/137‑1 (MQ=255) tggtccggtggtccggTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTCCACACATGc > 1:3128444/1‑137 (MQ=255) tggtccggtggtccggTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGc > 1:9302292/1‑137 (MQ=255) tggtccggtggtccggTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGc < 2:4906065/137‑1 (MQ=255) tggtccggtggtccggTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑aa > 1:330146/1‑117 (MQ=255) ggtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGcc < 2:4509020/137‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCt < 2:2511215/137‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCt < 2:17337278/137‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCt < 1:6907821/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGTTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCaa < 2:8114090/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCaa < 2:2094910/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCaa < 2:11955812/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCaa < 2:8481160/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCaa < 1:8519424/137‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCaa > 1:55433/1‑137 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAAC‑TTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTacaca < 2:12980526/126‑1 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAAC‑TTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTacaca > 1:12980526/1‑126 (MQ=255) tggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGAt < 2:183219/137‑1 (MQ=255) gtccggtATATATACTCTAATGATTTATAAAATTTCTATGAACTAACTTTTTGGAACATTTATAGAAGTGGGATTTGTTACATAGGTGCCGGGCTTGTAG‑TGGG‑TAAA‑CCTGTTTCTACACACATGCCTCAAGATCt < 2:6394104/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTCTAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:13944173/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:15786778/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:17088762/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:14843491/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:3234719/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:14409413/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:7860744/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:10330668/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:11903098/137‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:14968749/137‑1 (MQ=255) tataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑a < 1:1700893/137‑1 (MQ=255) aCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGa > 1:6368493/1‑137 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt > 1:15514443/1‑121 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCt < 2:15514443/121‑1 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTCCACACATGCCTCAAGATCTGTGTACTGT‑AGGAGCggg > 2:16150265/1‑137 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCggg > 2:18808210/1‑137 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCggg > 2:6718641/1‑137 (MQ=255) aTGGTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGTACTGT‑AGGAGCGGGt > 2:61634/1‑137 (MQ=255) aTGATTTATAAAATTTTTCTGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CAGG‑TAAA‑CCCACTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGt > 1:18960229/1‑137 (MQ=255) aTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCTCTCCTACACACATGCCTCAAGATCTGTGCAATGT‑AGGAGCGGGt > 1:18381555/1‑137 (MQ=255) aTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTCCACACATGACTCAAGATCTGTGCAATGT‑AGGAGCGGGt > 1:16748938/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGttt > 2:13300502/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGttt > 2:10485931/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGttt > 1:4048574/1‑137 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATACTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACCGT‑CGGAGCGGGttt > 2:15086335/1‑137 (MQ=255) tttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTCCACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGtttcc > 1:9923050/1‑135 (MQ=255) tttATAAAATTTTTATGAACTAAC‑TTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTAcc > 2:1390785/1‑137 (MQ=255) taAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCcgc > 2:5088531/1‑137 (MQ=255) aaaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACCCATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCcgcg > 1:6156632/1‑137 (MQ=255) aaaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑CGGAGCGGGTTTACCcgcg > 1:4376520/1‑137 (MQ=255) aaaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCcgcg > 1:7335166/1‑137 (MQ=255) ttttATGAACCAACTTTTTGGAGTATTTATAGAAGGGGGATTTGTTACAGATGTGCCGGGCTCTTCG‑CGGG‑GAAA‑CCCGCTCCTACACACATGCTTCAAGATCTGTGCACTGT‑AGGAGCGGGTTGACCCGCGAAAgg < 2:29147/137‑1 (MQ=255) cataaactaactTTTCGTAAGATTTATAGAGTGGGGATTTTTTACATAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACACCCCTCAAGATCTGTGCACTGT‑AGGAACGGGTCTAACCGCGAAAGGGcc < 2:11289082/133‑1 (MQ=25) aTGAACTAATTTTTTGGAATATTTATAGAGGGGGGATTTGTCACAGAGGTGCCGGGCTTTTCG‑CGGG‑GAAA‑CCCGCCCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCg < 1:10033206/137‑1 (MQ=255) aTGAACTAACTTTTTGGAATATTTATAGAAGTGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGGCA‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCg < 1:13734678/137‑1 (MQ=255) aTGAACTAACTTTTGGGAATATTTAGAGAAGGGGGGTTTGTTACAGAGGTGCTGGGCTCTTCGTGGGG‑A‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGG‑AGGAGTGGGTTTACCCGCGAAAGGGCCg < 2:16820428/137‑1 (MQ=255) taactTTTTGGAATATTTATAGAAGGGGGATTGGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCACTCCTACACACATGCCGCAAGGTCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAg < 2:5590309/137‑1 (MQ=38) tatTTAGAAAATGGGGATTGGTTACAGAGGTGCTGGTTTCTTCG‑TGGG‑G‑AACCCCGTTCCTACCCACATGCCTAAAGGTCTGT‑TAATGTGAGGGGCGGGTTGACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAgg < 1:9480826/137‑1 (MQ=255) tgataGAATGGGGATTTGTTCCAGGGTTGCCGGGCTCTTCG‑CGGT‑TAAA‑CCATCCCCTACACACCTTCCTCAAAATTTGTGCACTGT‑GGGAGCGGGTTCACCCCCGAAAGGGCCGGAACAGGTGGACTCGGAGGCCg < 2:3540886/135‑1 (MQ=255) ggATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAgg > 2:7674808/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTCCACACATGCCTCAAAATCTGTGCCCTGT‑AAGAGCGGGTTTCCCCGCGAAAGGGCCGGAACAAGTTTACCCGGAGGCCGCAATccccaaga > 1:8844216/1‑132 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGa > 2:3986318/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGa > 2:528513/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGa > 2:13525071/1‑137 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACACGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAATCCCGAGGa > 1:16177036/1‑137 (MQ=255) gTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTg < 2:7494647/137‑1 (MQ=255) ggTGCCGGGCTCTTCG‑CGGG‑TCAA‑CCCGCTCCTCCACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCAAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGaa > 1:13506731/1‑137 (MQ=255) ggTGCCGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGaa > 2:9419416/1‑137 (MQ=255) gtaccGGGCTCTTCG‑TGGG‑TAAA‑CCCGCTCCTACACACATACCTCAAGATCTGGGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAAc < 1:17789440/134‑1 (MQ=38) ccGGGCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGc < 2:10996966/137‑1 (MQ=255) ggCTCTTCG‑CGGG‑TCAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTAACCGCGAAAGGGCCGGAATAGGTTTACTCGGAGGCCGCAGTCCCAAGGAAATTGCGCAAGAAATGCcgc > 2:5962699/1‑137 (MQ=255) ggCTCTTCG‑CGGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCATTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc < 1:5982344/137‑1 (MQ=255) tttCG‑CGGG‑GAAA‑CCCGCTCCTACACACATGCCTCAAGATTTGTGCACTGG‑AGGAGTGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTAc < 1:7942386/136‑1 (MQ=255) ctTCG‑CGGG‑TAAA‑CCCGCTCCTACACACGTGCCTAAAGATCTGTGCACTGG‑AGGAGCGGGTTTACCCGTGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTAc < 1:11298637/137‑1 (MQ=255) g‑cgGG‑TAAA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGctc > 2:8900408/1‑137 (MQ=255) | TGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCG‑CGGG‑T‑AA‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGT‑AGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTC > AE015451_phaM1/278608‑278872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |