| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 1,738,086 | Δ40,059 bp | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | 60 genes [PP_1532 CDS (putative Phage integrase)], PP_1533 CDS (putative Excisionase), PP_1534 CDS (conserved protein of unknown function), PP_1535 CDS (putative Methyltransferase), PP_1536 CDS (conserved protein of unknown function), PP_1537 CDS (conserved protein of unknown function), PP_5472 CDS (conserved exported protein of unknown function), PP_1538 CDS (conserved protein of unknown function), PP_1539 CDS (conserved protein of unknown function), PP_1540 CDS (conserved protein of unknown function), PP_1541 CDS (putative Methyltransferase), PP_1542 CDS (conserved protein of unknown function), PP_1543 CDS (conserved protein of unknown function), PP_1544 CDS (conserved protein of unknown function), PP_1545 CDS (conserved protein of unknown function), PP_1546 CDS (conserved protein of unknown function), PP_5473 CDS (putative transcriptional regulator_ LuxR family), PP_5474 CDS (conserved protein of unknown function of phage origin), PP_1548 CDS (conserved protein of unknown function), PP_5744 CDS (conserved protein of unknown function_ phage origin), PP_1549 CDS (Transcriptional regulator_ Cro_CI family), PP_1550 CDS (Transcriptional regulator_ Cro_CI family), PP_1551 CDS (putative Phage replication protein O), PP_1552 CDS (putative Phage replication protein), PP_1553 CDS (conserved protein of unknown function), PP_1554 CDS (conserved protein of unknown function), PP_1555 CDS (putative Phage integrase), PP_1556 CDS (conserved protein of unknown function), PP_1557 CDS (conserved protein of unknown function), PP_1558 CDS (conserved protein of unknown function), PP_1559 CDS (Holin), PP_1560 CDS (conserved protein of unknown function), PP_1561 CDS (putative Phage holin), PP_1562 CDS (putative Phage terminase_ small subunit), PP_1563 CDS (putative Phage terminase_ large subunit), PP_1564 CDS (conserved exported protein of unknown function), PP_1565 CDS (Phage portal protein_ HK97 family), PP_1566 CDS (Peptidase U35), PP_1567 CDS (Capsid protein), PP_1568 CDS (conserved protein of unknown function), PP_1569 CDS (conserved protein of unknown function), PP_1570 CDS (Head‑tail adaptor), PP_1571 CDS (conserved protein of unknown function), PP_1572 CDS (conserved protein of unknown function), PP_1573 CDS (putative Major tail protein), PP_1574 CDS (conserved protein of unknown function), PP_1575 CDS (conserved protein of unknown function), PP_1576 CDS (putative Immunity protein), PP_1577 CDS (Phage tail tape meausure protein_ lambda family), PP_1578 CDS (conserved protein of unknown function), PP_5475 CDS (conserved protein of unknown function), PP_1579 CDS (conserved protein of unknown function), PP_1580 CDS (conserved protein of unknown function), PP_1581 CDS (BNR domain protein), PP_1582 CDS (conserved protein of unknown function), PP_1583 CDS (putative Structural protein P5), PP_1584 CDS (conserved protein of unknown function), PP_5476 CDS (conserved protein of unknown function), PP_1585 CDS (putative Antidote protein), [PP_1586 CDS (putative Killer protein)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 1738086 | 1778144 | 40059 | 1019 [0] | [0] 1018 | [PP_1532 CDS (putative Phage integrase)]–[PP_1586 CDS (putative Killer protein)] | [PP_1532 CDS (putative Phage integrase)],PP_1533 CDS (putative Excisionase),PP_1534 CDS (conserved protein of unknown function),PP_1535 CDS (putative Methyltransferase),PP_1536 CDS (conserved protein of unknown function),PP_1537 CDS (conserved protein of unknown function),PP_5472 CDS (conserved exported protein of unknown function),PP_1538 CDS (conserved protein of unknown function),PP_1539 CDS (conserved protein of unknown function),PP_1540 CDS (conserved protein of unknown function),PP_1541 CDS (putative Methyltransferase),PP_1542 CDS (conserved protein of unknown function),PP_1543 CDS (conserved protein of unknown function),PP_1544 CDS (conserved protein of unknown function),PP_1545 CDS (conserved protein of unknown function),PP_1546 CDS (conserved protein of unknown function),PP_5473 CDS (putative transcriptional regulator_ LuxR family),PP_5474 CDS (conserved protein of unknown function of phage origin),PP_1548 CDS (conserved protein of unknown function),PP_5744 CDS (conserved protein of unknown function_ phage origin),PP_1549 CDS (Transcriptional regulator_ Cro_CI family),PP_1550 CDS (Transcriptional regulator_ Cro_CI family),PP_1551 CDS (putative Phage replication protein O),PP_1552 CDS (putative Phage replication protein),PP_1553 CDS (conserved protein of unknown function),PP_1554 CDS (conserved protein of unknown function),PP_1555 CDS (putative Phage integrase),PP_1556 CDS (conserved protein of unknown function),PP_1557 CDS (conserved protein of unknown function),PP_1558 CDS (conserved protein of unknown function),PP_1559 CDS (Holin),PP_1560 CDS (conserved protein of unknown function),PP_1561 CDS (putative Phage holin),PP_1562 CDS (putative Phage terminase_ small subunit),PP_1563 CDS (putative Phage terminase_ large subunit),PP_1564 CDS (conserved exported protein of unknown function),PP_1565 CDS (Phage portal protein_ HK97 family),PP_1566 CDS (Peptidase U35),PP_1567 CDS (Capsid protein),PP_1568 CDS (conserved protein of unknown function),PP_1569 CDS (conserved protein of unknown function),PP_1570 CDS (Head‑tail adaptor),PP_1571 CDS (conserved protein of unknown function),PP_1572 CDS (conserved protein of unknown function),PP_1573 CDS (putative Major tail protein),PP_1574 CDS (conserved protein of unknown function),PP_1575 CDS (conserved protein of unknown function),PP_1576 CDS (putative Immunity protein),PP_1577 CDS (Phage tail tape meausure protein_ lambda family),PP_1578 CDS (conserved protein of unknown function),PP_5475 CDS (conserved protein of unknown function),PP_1579 CDS (conserved protein of unknown function),PP_1580 CDS (conserved protein of unknown function),PP_1581 CDS (BNR domain protein),PP_1582 CDS (conserved protein of unknown function),PP_1583 CDS (putative Structural protein P5),PP_1584 CDS (conserved protein of unknown function),PP_5476 CDS (conserved protein of unknown function),PP_1585 CDS (putative Antidote protein),[PP_1586 CDS (putative Killer protein)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 1738085 | 0 (0.000) | 1018 (1.190) | 136/270 | 0.1 | 100% | intergenic (‑67/+1) | yffB CDS (putative glutathione‑dependent thiol reductase)/PP_1532 CDS (putative Phage integrase) | –/– |
| ? | AE015451_phaM1 | 1778145 = | 0 (0.000) | intergenic (‑1/‑196) | PP_1586 CDS (putative Killer protein)/PP_1587 CDS (NhaP‑type Na+_H+ and K+_H+ antiporters) | –/– | |||||
Only 100 of 1018 total aligned reads displayed.
TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGA < 1:18038281/137‑1TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGA < 1:13514804/137‑1 CTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAG < 2:112612/137‑1 TTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGC < 1:8741792/137‑1 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 1:14178989/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:14861891/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:13144234/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:7277028/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:2866151/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 2:18896181/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAAT > 1:9964922/1‑137 GCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGC < 2:6950474/132‑1 GCCAGGTACGCGCC‑TTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCAAATATCTCCCAAAAATTAGTCGCAGGAAAGCTGAATG > 1:13736102/1‑137 CCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATG < 1:6005044/137‑1 TACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAA > 2:10190266/1‑137 CGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACG > 2:12607981/1‑137 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 1:12772629/1‑137 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT > 1:8468459/1‑137 CTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATT < 1:17454652/137‑1 tgCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTT < 2:15465780/135‑1 TTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTT < 1:11516264/137‑1 GTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTC < 2:4069677/137‑1 GTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAATGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGA < 2:6247609/137‑1 GTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGA < 1:7447464/137‑1 CAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTAT > 1:9504366/1‑137 TTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACG > 1:17795091/1‑137 TTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACG < 1:7002986/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 2:3738102/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:11026328/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:2290630/137‑1 TGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGG < 1:3848748/137‑1 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 1:7709543/1‑137 GATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGG > 1:15665786/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 1:9717822/1‑137 TGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGAT > 2:9018563/1‑137 GCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATC < 1:10014367/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 1:4551005/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 2:10605340/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 2:6523458/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCG < 1:13113712/137‑1 CCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGGCGCAGGAGAGCTGAAGGCGTAACGTGAGTAGTTAAGTTAGATTAGACGACGGGATCG < 2:15191463/137‑1 AAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGT > 2:4674946/1‑137 AAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTA > 1:5681605/1‑137 AGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAG < 2:12903528/137‑1 AGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTT < 2:12173887/137‑1 cAGTCCTTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCAAATATCTACCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:13596967/2‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCCATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:16458031/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:3359413/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 2:8535815/1‑137 AAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTACCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGT > 1:3244856/1‑137 AGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTC > 2:7522095/1‑137 AGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTC > 2:7770723/1‑137 ATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCA > 2:13788449/1‑137 AATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAA > 1:815152/1‑137 ATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAAC > 2:1695882/1‑137 TGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACT < 2:5092543/137‑1 GATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGC < 1:6621953/137‑1 TTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAA < 2:9689949/137‑1 ACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGC < 2:215207/137‑1 TCCCCAAAACCTCCCCAATATCGCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACTTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTC < 2:10947024/137‑1 CCCCAAAACCTCCCCAATATCGCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCC < 2:16622189/137‑1 CCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCG > 2:11657742/1‑137 CCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCG > 1:15919197/1‑137 CCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCG > 1:2870221/1‑137 CCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCG > 1:4163771/1‑137 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 1:10398836/137‑1 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 2:536726/137‑1 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 2:18529334/137‑1 CAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGT < 1:6539217/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 1:1625848/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 1:14925144/137‑1 AAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA < 2:6069897/137‑1 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 1:512545/1‑137 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCAC > 1:11786855/1‑137 AACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCA > 1:14816235/1‑136 ACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACA < 1:12267629/137‑1 CTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATC < 1:17048418/137‑1 CTCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATC > 1:10682768/1‑137 TCCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCT < 2:5759156/137‑1 CCCCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTG > 1:16559483/1‑137 CCAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCT < 1:4848001/137‑1 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:828430/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:17299319/1‑137 CAATATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTG > 2:15977120/1‑137 ATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTA < 1:9066152/137‑1 ATCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTA < 2:1422425/137‑1 TCTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTAT < 1:1948406/137‑1 CTCCCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATC < 1:6350205/137‑1 CCAAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATC < 2:2393654/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:18626069/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:2556828/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:14445386/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:12561699/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:14552955/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT < 2:18015767/137‑1 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 2:17678458/1‑137 AAAAATTAGTCGCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCAT > 1:3630756/1‑137 GCAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTC > 1:15240874/1‑137 CAGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCNGGTCACATCTGCTGGGTATCATCATGTTACATATTCC < 1:18290138/137‑1 AGGAGAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCC < 2:16209281/137‑1 TCTTCGAGCCAGGTACGCGCCTTTTTCATGGTGTCACAGGCTTTGATGCCGTAAAGAGTGTAAGTCATTGAATTTAAAGGGGCTGGGATTACTCCCCAAAACCTCCCCAATATCTCCCAAAAATTAGTCGCAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/1737951‑1738085‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGCTGAATGCTTAACGTTATTCGTTAATTTCGATTATACGACGGGATCGCTGTAGTTCAAGTCTTCAATAACGGGCACGCGACTCGCAAGCTCCGGTCACATCTGCTGGGTATCATCATGTTACATATTCCCCCG > AE015451_phaM1/1778145‑1778280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |