| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AE015451_phaM1 | 3,366,695 | Δ15,777 bp | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | 20 genes [PP_2964 CDS (putative transposase)], tnpC CDS (putative tnpA repressor TnpC), PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity), csoR CDS (putative repressor of copper utilisation proteins), PP_2970 CDS (conserved exported protein of unknown function), PP_2971 CDS (transposase), PP_2972 CDS (conserved protein of unknown function), dgkA‑II CDS (diacylglycerol kinase), PP_2974 CDS (putative sulfatase), PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3), PP_2976 CDS (putative transposase), PP_mr38 ncRNA (ALIL regulatory region), tnpB CDS (Tn4652_ transposase subunit B), PP_2978 CDS (conserved protein of unknown function), PP_2979 CDS (conserved protein of unknown function), PP_2980 CDS (conserved protein of unknown function), tnpS CDS (putative cointegrate resolution protein S), tnpT‑I CDS (putative cointegrate resolution protein T Tn4652), PP_2983 CDS (conserved protein of unknown function), [PP_2984 CDS (conserved protein of unknown function)] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451_phaM1 | 3366695 | 3382471 | 15777 | 663 [0] | [0] 653 | [PP_2964 CDS (putative transposase)]–[PP_2984 CDS (conserved protein of unknown function)] | [PP_2964 CDS (putative transposase)],tnpC CDS (putative tnpA repressor TnpC),PP_2968 CDS (putative nickel_cobalt transporter_ high‑affinity),csoR CDS (putative repressor of copper utilisation proteins),PP_2970 CDS (conserved exported protein of unknown function),PP_2971 CDS (transposase),PP_2972 CDS (conserved protein of unknown function),dgkA‑II CDS (diacylglycerol kinase),PP_2974 CDS (putative sulfatase),PP_2975 CDS (Insertion element ISR1 uncharacterized 10 kDa protein A3),PP_2976 CDS (putative transposase),PP_mr38 ncRNA (ALIL regulatory region),tnpB CDS (Tn4652_ transposase subunit B),PP_2978 CDS (conserved protein of unknown function),PP_2979 CDS (conserved protein of unknown function),PP_2980 CDS (conserved protein of unknown function),tnpS CDS (putative cointegrate resolution protein S),tnpT‑I CDS (putative cointegrate resolution protein T Tn4652),PP_2983 CDS (conserved protein of unknown function),[PP_2984 CDS (conserved protein of unknown function)] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 3366694 | 0 (0.000) | 647 (0.760) | 126/268 | 0.2 | 100% | intergenic (+360/‑1) | PP_2962 CDS (Alcohol dehydrogenase_ zinc‑containing)/PP_2964 CDS (putative transposase) | –/– |
| ? | AE015451_phaM1 | 3382472 = | 0 (0.000) | intergenic (+1/‑28) | PP_2984 CDS (conserved protein of unknown function)/PP_5545 CDS (protein of unknown function) | –/– | |||||
Only 100 of 663 total aligned reads displayed.
TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 2:10882601/137‑1TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG > 2:2002962/1‑137TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 2:2324079/137‑1TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATAATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG < 2:13093541/137‑1 TGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCA < 2:16223978/137‑1 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:8831328/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:10091150/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 2:8767698/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:12752280/1‑137 CCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGC > 1:13916250/1‑137 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA > 2:15362065/1‑137 CGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCA < 1:12975403/137‑1 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 1:2398497/1‑137 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 2:14285397/1‑137 TAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTCGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCA > 2:11861122/1‑137 AAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAA < 1:1241849/137‑1 AATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAAT < 1:14064937/137‑1 ATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCTAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 1:9122619/137‑1 ATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 2:18387497/137‑1 ATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATG < 1:8255792/137‑1 TTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGG > 2:5099788/1‑137 GACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 1:4232117/137‑1 GACATTCGTTCTGTAAATATATGATTTAAAAGGCTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCACTTGGGGGCAGCAGGGCACGGCAAAATGGACTC < 2:12213151/137‑1 ACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCG > 2:6319683/1‑137 TCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAAT < 2:15844591/137‑1 TCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGAGGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAAT < 1:1768603/137‑1 ATATGATTTAAAATGTTATTCGAGATGCCGTGGCTTGCTGGTCATCCACCGTCTTGCTAGCCGTCTATGCTGATGCGTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACA < 2:9276724/137‑1 TGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAAT > 2:7027082/1‑137 ATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGA < 1:7003230/137‑1 TTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGAC > 1:12135656/1‑137 TTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGAC > 1:18408770/1‑137 TTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGAC > 1:13651322/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA < 1:2731970/137‑1 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 1:10081463/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 1:9882574/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 2:6470474/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAAAAAATGACGA > 1:3369755/1‑137 TAAAAGGTTATTCGAGAGGCCGTGGATTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGA > 2:8481690/1‑137 AGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGA > 1:5079265/1‑137 GTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACG > 1:2333733/1‑137 GTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACG < 1:7804656/137‑1 TATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGAT < 1:7498776/137‑1 TCGAGAGGCAGTGGCTTGCTGGTCAGCCACAGTCTGGCTAGACGGCTATGTTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAACGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCG > 2:16044712/1‑137 CGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGC > 2:1061250/1‑137 CGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGC > 1:2130113/1‑137 GCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCT > 1:10653356/1‑137 CCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTA > 2:16784650/1‑137 CGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAA > 2:6656441/1‑137 CGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAA > 2:12595576/1‑137 GTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGACTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATG < 2:13302746/96‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:1558243/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 2:5376696/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:16456447/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC > 1:1597603/1‑137 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 2:11325220/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGC < 1:4694372/137‑1 GGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCATCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGATGATTCGCTGATCTAACGC > 2:10333538/1‑137 TTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCG < 2:17135380/137‑1 tgtTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGAGGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGTTGATCTAACGCGCGA < 1:11778185/134‑1 TGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGA < 2:14460280/137‑1 CTGGTCATCCACCGTCTGTCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGG < 2:14659507/137‑1 CTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGG < 2:13623963/137‑1 CTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGG < 1:16919188/137‑1 GGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGCCTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCA > 2:18738646/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:18677910/1‑137 GTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAT > 1:11442078/1‑137 CCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCT > 1:528932/1‑137 CACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTG > 2:2792552/1‑137 ACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGA < 1:5507799/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:14688625/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:16561475/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:17835636/137‑1 CTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGA < 1:15797699/137‑1 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:1741403/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 2:18051372/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 2:16518168/1‑137 TGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAG > 1:5642744/1‑137 GGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGC < 2:11437519/137‑1 CTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGC < 2:37945/137‑1 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 1:6276654/137‑1 TATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAACGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGT < 1:15349839/137‑1 ATGCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTG < 2:6097902/137‑1 GCTGATGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGAT > 2:4517334/1‑137 TGCTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATC < 2:17557755/137‑1 CTTTTGTCTCGCTGGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAATGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC < 1:9470988/137‑1 CTTTTGCCTCGCTTTGGGGCATCAGGGCACGGCAAAATGGACTCGGAATGACTAACTCAACAAATGGCGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC < 2:17933116/137‑1 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC > 2:15129357/1‑137 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC < 2:768410/137‑1 CTTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCAC > 2:5632932/1‑137 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG < 1:732344/137‑1 TTTTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACG < 1:11272823/137‑1 TTGCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAA > 2:820826/1‑137 GCCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATT < 1:3747239/137‑1 CCTCGTTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAGTGGCCAACGCAACAACTGACGACCGACGGTTCACTGAGCTAACGCGCGATTCATTAGCTGACGTGAGCGCGGGTTTGGTGAGTGATCACGAATTG < 2:9627382/137‑1 CCTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTG < 2:3399203/137‑1 CTCGCTTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGG > 1:15151963/1‑137 TTGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAG > 1:5855481/1‑137 TGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAACTGACGACCGACGATTCGCTGATCTAACGCGCGAGGCAGTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGA < 1:8596435/137‑1 TGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGA < 2:8979567/137‑1 TGGGGGCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGA > 1:10942737/1‑137 TATGCCGAGATAAGGCAAAAATTAGGACATTCGTTCTGTAAATATATGATTTAAAAGGTTATTCGAGAGGCCGTGGCTTGCTGGTCATCCACCGTCTGGCTAGCCGTCTATGCTGATGCTTTTGCCTCGCTTGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/3366558‑3366694‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCAGCAGGGCACGGCAAAATGGACTCGGAATGACCAACTCAACAAATGACGACCGACGATTCGCTGATCTAACGCGCGAGGCATTAGCTGACGTGAGCGCGGGTTTGGTGATTGATCACGAATTGGTCGAGATTTGG > AE015451_phaM1/3382472‑3382607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |