| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451_phaM1 | = 4496478 | 92 (0.110) | 920 (1.070) | 144/270 | 0.1 | 90.9% | coding (788/960 nt) | PP_3987 CDS (Site‑specific recombinase_ phage integrase family) | |
| ? | AE015451_phaM1 | = 4538243 | NA (NA) | intergenic (+45/‑275) | PP_4025 CDS (transposase)/PP_4027 CDS (conserved protein of unknown function) | –/– | |||||
Only 100 of 920 total aligned reads displayed.
AGCGGAAGGAGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/4496343‑4496478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGG < AE015451_phaM1/4538243‑4538108 AGCGGAAGGAGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAG > 2:8493802/1‑137 GGAAGGAGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAA > 1:10002902/1‑137 GGAAGGAGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCGCTTGTGGGTGAGGAGTAA > 2:14411156/1‑137 AAGGAGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACC > 1:16810901/1‑137 AGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATC < 2:5164220/137‑1 AGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATC < 2:1351897/137‑1 GCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCC < 1:9714039/137‑1 GCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCAT < 2:11955601/137‑1 GGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGA < 2:1988578/137‑1 GGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGA < 2:17724540/137‑1 GGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGA < 1:12290878/137‑1 GGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGA > 1:13711608/1‑137 GGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGA < 1:14510144/137‑1 GAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAA < 1:7489569/137‑1 TTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGNCCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCC < 1:15968889/137‑1 TTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCC < 1:12867085/137‑1 TTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCC < 2:935413/137‑1 TTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCC < 1:1406651/137‑1 GCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCAC > 2:2415537/1‑137 CCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACC < 2:7006625/137‑1 CCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACC < 2:306030/137‑1 CCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACC < 2:11289614/137‑1 ATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAA < 1:15137790/137‑1 TCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAG < 1:5285722/137‑1 TAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGT > 2:6275381/1‑137 TCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGA < 2:14114475/137‑1 CACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAA < 2:13215014/137‑1 ACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAG > 1:3645032/1‑137 TACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCC < 1:2506254/137‑1 TACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCC > 2:8172398/1‑137 AAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGT < 2:4319987/137‑1 GGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCG > 1:15443256/1‑137 GGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCG > 2:128415/1‑137 GGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCG > 1:18799255/1‑137 GGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCG > 1:11168583/1‑137 GGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCG < 2:4093425/137‑1 GGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCG > 2:2827019/1‑137 AGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGG > 2:3514300/1‑137 AGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGG > 2:10042400/1‑137 AGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGG < 1:9441995/137‑1 AGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCA < 1:15866881/137‑1 AGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCA > 2:13946747/1‑137 AGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCA > 1:4417206/1‑137 AGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCA > 1:6197015/1‑137 AGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCA > 2:766848/1‑137 AGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCA > 2:6549952/1‑137 TCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCT > 1:2212373/1‑137 CACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTG < 1:13188282/137‑1 ACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGG > 2:18266792/1‑137 CGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGC > 1:18255338/1‑137 GGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCG < 2:7957016/137‑1 GGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCG < 2:16114558/137‑1 GGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCG < 2:5997374/137‑1 GGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCG < 1:8673869/137‑1 CTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAG < 1:8034243/137‑1 CTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAG < 1:6984364/137‑1 TTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGC < 2:16406865/137‑1 TTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGC > 2:8743458/1‑137 GCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGC < 2:15864069/137‑1 CTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCGCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGTGAACAGTTCCATGGCAGCAGCG > 1:16383724/1‑137 TTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATNAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGC > 1:17497303/1‑137 TCGACGACGCTAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCT < 2:10613339/137‑1 TCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAGCCCCACCTACCACAATGTGGAAGCCAAAGTTACCGTTGCATCCCTGGCGAACAGTTCCATGGCAGCAGCGCT < 2:13795402/137‑1 CGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTT < 1:644136/137‑1 CGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGT < 1:590737/137‑1 GACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTA < 2:5631069/137‑1 GCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTC < 2:671672/137‑1 GCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTC < 1:10997717/137‑1 AGACCGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACC < 2:5417683/137‑1 CGCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATG < 1:11871769/137‑1 GCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGTGCTTCGTAGTCTGCTACCGATGA > 2:15044752/1‑137 GCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGA > 1:17105850/1‑137 GCGATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGA > 1:12692919/1‑137 GATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGG > 1:7793420/1‑137 GATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGG > 1:4878140/1‑137 ATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGC > 1:854601/1‑137 ATTCGGCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGC > 2:17196719/1‑137 GCATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCG < 1:147899/137‑1 CATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGG < 1:10418662/137‑1 CATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGG < 1:11577579/137‑1 CATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGG < 2:3755471/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 2:9668349/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 2:17972043/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 2:4924249/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 2:17356947/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 2:9016645/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 2:12381604/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 1:17982167/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 1:1949481/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 2:7273049/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 1:4696434/137‑1 ATGCTCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGC < 1:2872417/137‑1 TCTTGTGGGTGAGGAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTC < 2:1477062/137‑1 GAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTG < 2:11041488/137‑1 GAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTG < 1:3960630/137‑1 GAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTG < 2:10362729/137‑1 GAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTG < 2:12218364/137‑1 GAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTG < 2:18547191/137‑1 AGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGG > 2:15458301/1‑137 AGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGACAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGG > 2:16723078/1‑137 AGCGGAAGGAGCGCGGAGTTTGCAATCCTTATCTAATCACTACACAAGACGGTAGAGCTGTCACGGCGTCAATGCTTCGTCTTCGCTTCGACGACGCCAGGAAGACCGCGATTCGGCATGCTCTTGTGGGTGAGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451_phaM1/4496343‑4496478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGG < AE015451_phaM1/4538243‑4538108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |